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基于生物信息学分析miR-30a及相关炎症指标在脓毒症中的表达及临床意义
引用本文:何爱凤,秦晓梦,尹江宁,蒋俊,徐美玲.基于生物信息学分析miR-30a及相关炎症指标在脓毒症中的表达及临床意义[J].江苏大学学报(医学版),2022,32(2):118-123.
作者姓名:何爱凤  秦晓梦  尹江宁  蒋俊  徐美玲
作者单位:(1. 江苏大学医学院,江苏 镇江 212013; 2. 复旦大学附属中山医院青浦分院急诊科,上海 200000; 3. 南京医科大学附属江宁医院急诊科,江苏 南京 211199; 4. 江苏大学药学院,江苏 镇江 212013; 5. 镇江市京口区健康路社区卫生服务中心,江苏 镇江 212001)
基金项目:镇江市社会发展项目;江苏省重点实验室开放课题项目;国家自然科学基金;江苏省自然科学基金资助项目;江苏省中医药科技发展计划
摘    要:目的: 探讨 miR 30a及相关炎症指标在脓毒症中的表达并分析其临床意义。方法: 运用GEO数据库检索筛选基因芯片并分析miR-30a表达情况,采用miRecords网站数据库的预测软件预测其靶基因,并对其进行KEGG通路富集分析。收集2019年1月至2021年1月江苏大学附属医院收治的脓毒症患者64例,根据病情轻重分为脓毒症非休克组和休克组,每组32例。根据28 d 病情转归情况分为存活组(n=44)与死亡组(n=20)。另选10例健康体检者作为对照组。检测各组的白细胞(WBC)、C反应蛋白(CRP)、降钙素原(PCT)和IL 6水平,并计算序贯器官衰竭评分(SOFA);RT-PCR检测外周血miR-30a表达,并分析与SOFA评分的相关性;应用ROC曲线评价miR 30a对脓毒症的诊断价值。结果: GEO数据库检索发现miR-30a在脓毒症组的表达高于对照组(P<0.05)。与对照组相比,脓毒症组miR-30a、WBC、CRP、PCT、IL 6及SOFA评分均升高(P<0.05或<0.01);与脓毒症非休克组相比,休克组WBC及SOFA评分升高(P<0.05);与脓毒症存活组相比,死亡组SOFA评分升高(P<0.01);Spearman相关性分析显示,血清miR-30a相对表达量与脓毒症SOFA评分呈正相关(r=0.751,P<0.01),与IL-6、CRP、PCT的表达呈正相关(r=0.667、0.736、0.496, P均<0.01);ROC曲线评价结果显示miR-30a曲线下面积为0.831(P<0.01),敏感度89.1%,特异性80.0%;CRP曲线下面积为0.841(P<0.01),敏感度79.7%,特异性90.0%;miR-30a+CRP曲线下面积为0.902(P<0.01),敏感度89.1%,特异性90.0%。结论: miR 30a及相关炎症指标在脓毒症中呈高表达,其可能成为诊断脓毒症的潜在标志物。

关 键 词:脓毒症  miR-30a  SOFA评分  白细胞  C反应蛋白  降钙素原  IL-6  生物信息学  
收稿时间:2021-12-21

The expression and clinical significance of miR-30 a and related inflammatory indicators in sepsis:analysis based on bioinformatics
HE Aifeng,QIN Xiaomeng,YIN Jiangning,JIANG Jun,XU Meiling.The expression and clinical significance of miR-30 a and related inflammatory indicators in sepsis:analysis based on bioinformatics[J].Journal of Jiangsu University Medicine Edition,2022,32(2):118-123.
Authors:HE Aifeng  QIN Xiaomeng  YIN Jiangning  JIANG Jun  XU Meiling
Institution:(1. School of Medicine, Jiangsu University, Zhenjiang Jiangsu 212013; 2. Department of Emergency, Qingpu Branch of Zhongshan Hospital Affiliated to Fudan University, Shanghai 200000; 3. Department of Emergency, Jiangning Hospital Affiliated to Nanjing Medical University, Nanjing Jiangsu 211199; 4. School of Pharmacy, Jiangsu University, Zhenjiang Jiangsu 212013; 5. Community Health Service Center, Jiankang Road, Jingkou District, Zhenjiang City, Zhenjiang Jiangsu 212001, China)
Abstract:[Abstract]Objective: To investigate the expression of miR-30a and related inflammatory indicators in sepsis and analyze its clinical significance based on bioinformatics. Methods: The gene chips were searched and screened by GEO database and their expression was analyzed. The target genes were predicted by the prediction software of miR-30a website database and KEGG pathway enrichment analysis was performed. A total of 64 sepsis patients admitted to Affiliated Hospital of Jiangsu University from January 2019 to January 2021 were collected and divided into non-shock group (n=32) and shock group (n=32) according to their severity. According to the outcome of 28 d, the sepsis patients were divided into survival group (n=44) and death group (n=20). Ten healthy subjects were selected as control group. The levels of white blood cells, C-reactive protein, procalcitonin and interleukin-6 in each group were detected, and sequential organ failure score (SOFA) were calculated. The expression of miR-30a in peripheral blood was detected by RT-PCR, and the correlation between miR 30a and SOFA score was analyzed. ROC curve was used to evaluate the diagnostic value of miR-30a in sepsis. Results:   GEO database retrieval showed that miR 30a expression in sepsis group was higher than that in control group (P<0.05). Compared with the control group, miR-30a, white blood cells, C-reactive protein, procalcitonin, interleukin-6 and SOFA scores were increased in the sepsis group(P<0.05 or <0.01). The white blood cells and SOFA scores in the shock group were higher than those in the non shock group (P<0.05). Compared with sepsis survival group, SOFA score was higher in death group(P<0.05). Spearman correlation analysis showed that the relative expression of miR 30a was positively correlated with SOFA score of sepsis (r=0.751, P<0.01) and the expressions of interleukin-6, C-reactive protein and procalcitonin (r=0.667, 0.736, 0.496, P<0.01). ROC curve evaluation results showed that the area under the curve of miR-30a was 0.831(P<0.01), the sensitivity was 89.1%, and the specificity was 80.0%; the area under the curve of C-reactive protein was 0.841(P<0.01), the sensitivity was 79.7%, the specificity was 90.0%. The area under the curve of miR 30a+C-reactive protein was 0.902(P<0.01), the sensitivity was 89.1%, and the specificity was 90.0%. Conclusion: miR 30a and related inflammatory markers are highly expressed in sepsis, which may be potential markers for the diagnosis of sepsis.
Keywords:   
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