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中药作用机理辅助解析系统的构建
引用本文:张百霞,骆四君,颜静,顾浩,罗计,张燕玲,陶欧,王耘. 中药作用机理辅助解析系统的构建[J]. 中国中药杂志, 2015, 40(19): 3697-3702
作者姓名:张百霞  骆四君  颜静  顾浩  罗计  张燕玲  陶欧  王耘
作者单位:北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102,北京中医药大学 中药信息工程研究中心, 北京 100102
基金项目:国家自然科学基金项目(81173568,81373985);教育部新世纪优秀人才支持项目(NECT-11-0605);北京中医药大学基本科研业务费自主选题项目(2015-JYB-XS054)
摘    要:针对目前基于网络药理学的中药作用机制解析存在对生物过程缺乏详细描述及网络模型构建效率比较低的问题,构建"中药作用机理辅助解析系统",实现中药作用机制生物网络模型的自动建模。该研究以实体语法系统为理论框架,融合中药方剂、单味药、化学成分、化学成分作用靶点、生化反应、信号通路及疾病相关靶点数据,建立形式化模型,编写推理引擎,构建界面友好、操作简单的中药作用机制辅助解析平台,可实现中药作用机制网络生物学模型的自动建模。"中药作用机理辅助解析系统"将为中药作用机制网络药理学模型提供自动高效的建模方法,发挥其辅助解析中药作用机制的功能,有助于对中药药性理论、配伍理论开展深入研究,为中药新药的研究和开发提供参考。

关 键 词:实体语法系统  中药  作用机制  辅助解析系统  网络药理学
收稿时间:2015-06-11

Construction of automatic elucidation platform for mechanism of traditional Chinese medicine
ZHANG Bai-xi,LUO Si-jun,YAN Jing,GU Hao,LUO Ji,ZHANG Yan-ling,TAO Ou and WANG Yun. Construction of automatic elucidation platform for mechanism of traditional Chinese medicine[J]. China Journal of Chinese Materia Medica, 2015, 40(19): 3697-3702
Authors:ZHANG Bai-xi  LUO Si-jun  YAN Jing  GU Hao  LUO Ji  ZHANG Yan-ling  TAO Ou  WANG Yun
Affiliation:Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China,Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China and Information Engineering Research Center for Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 100102, China
Abstract:Aim at the two problems in the field of traditional Chinese medicine (TCM) mechanism elucidation, one is the lack of detailed biological processes information, next is the low efficient in constructing network models, we constructed an auxiliary elucidation system for the TCM mechanism and realize the automatic establishment of biological network model. This study used the Entity Grammar Systems (EGS) as the theoretical framework, integrated the data of formulae, herbs, chemical components, targets of component, biological reactions, signaling pathways and disease related proteins, established the formal models, wrote the reasoning engine, constructed the auxiliary elucidation system for the TCM mechanism elucidation. The platform provides an automatic modeling method for biological network model of TCM mechanism. It would be benefit to perform the in-depth research on TCM theory of natures and combination and provides the scientific references for R&D of TCM.
Keywords:entity grammar systems  traditional Chinese medicine  mechanism elucidation  auxiliary elucidation platform  network pharmacology
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