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Decoding and rejuvenating human ageing genomes: Lessons from mosaic chromosomal alterations
Institution:1. School of Life Sciences, Yunnan Normal University, Kunming, Yunnan, 650500, China;2. The Engineering Research Center of Sustainable Development and Utilization of Biomass Energy, Ministry of Education, Kunming, Yunnan, 650500, China;3. Yunnan Environmental Mutagen Society, Kunming, Yunnan, 650500, China;1. Department of Nutrition, Harvard T.H. Chan School of Public Health, 655 Huntington Avenue, Building II 3rd Floor, Boston, MA, 02115, USA;2. Department of Neurology, Massachusetts General Hospital, Harvard Medical School, Boston, USA;3. Student Research Committee, Tabriz University of Medical Sciences, Tabriz, Iran;4. Nutrition Research Center, Department of Clinical Nutrition, School of Nutrition and Food Sciences, Tabriz University of Medical Sciences, Tabriz, Iran;5. Department of Epidemiology, Harvard T.H. Chan School of Public Health, 655 Huntington Avenue, Building II 2nd Floor, Boston, MA, 02115, USA;1. Robson DNA Science Centre, Arnie Charbonneau Cancer Institute, Calgary, Alberta, T2N 4N1, Canada;2. Department of Biochemistry & Molecular Biology, Cumming School of Medicine, University of Calgary, Calgary, Alberta, T2N 4N1, Canada;3. Department of Oncology, Cumming School of Medicine, University of Calgary, Calgary, Alberta, T2N 4N1, Canada;1. Division of Pulmonary Diseases, State Key Laboratory of Biotherapy, And Department of Respiratory and Critical Care Medicine, West China Hospital, West China School of Medicine, Sichuan University, Chengdu, Sichuan, 610041, China;2. Department of Respiratory Medicine, Hospital of Chengdu office of People’s Government of Tibetan Autonomous Region of China, Chengdu, Sichuan, 610041, China;3. Department of Clinical Laboratory, Xinjiang Provincial Corps Hospital Chinese People’s Armed Police Forces, Urumqi, Xinjiang, 830091, China;1. Neuroscience Research Group, Medical Research Institute, Faculty of Medicine, University of Antioquia (UdeA), Calle 70 No. 52-21, and Calle 62 # 52-59, Building 1, Room 412, SIU Medellin, Colombia;2. Neuroscience Research Institute, Department of Molecular Cellular Developmental Biology, University of California, Santa Barbara, CA, 93106, USA;1. ISGlobal, Barcelona, Spain;2. Centro de Investigación Biomédica en Red en Epidemiología y Salud Pública (CIBERESP), Madrid, Spain;3. CRG (Center for Genomics Regulation), Barcelona, Spain;4. Estonian Genome Centre Science Centre, University of Tartu, Tartu, Estonia;5. Genetics Unit, Universitat Pompeu Fabra, Institut Hospital del Mar d’Investigacions Mediques (IMIM), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Barcelona, Spain;6. Women''s and Children''s Hospital, South Australian Health and Medical Research Institute & University of Adelaide, Adelaide, South Australia, Australia;7. Department of Mathematics, Universitat Autònoma de Barcelona, Barcelona, Spain;1. Intituto de Biologia Molecular e Celular (IBMC)/ Instituto de Inovação e Investigação em Saúde (I3S), Porto University, Portugal;2. Unit of Experimental Biology, Department of Biomedicine, Faculty of Medicine, Porto University, Portugal;3. Faculty of Dental Medicine, Porto University, Portugal;4. Faculty of Nutrition and Food Sciences, Porto University, Portugal;5. Obstetrics-Gynecology, Hospital-CUF Porto, Portugal;6. Laboratory of General Physiology, Department of Immuno-Physiology and Pharmacology, Institute of Biomedical Sciences Abel Salazar, Porto University, Portugal
Abstract:One of the most curious findings emerged from genome-wide studies over the last decade was that genetic mosaicism is a dominant feature of human ageing genomes. The clonal dominance of genetic mosaicism occurs preceding the physiological and physical ageing and associates with propensity for diseases including cancer, Alzheimer’s disease, cardiovascular disease and diabetes. These findings are revolutionizing the ways biologists thinking about health and disease pathogenesis. Among all mosaic mutations in ageing genomes, mosaic chromosomal alterations (mCAs) have the most significant functional consequences because they can produce intercellular genomic variations simultaneously involving dozens to hundreds or even thousands genes, and therefore have most profound effects in human ageing and disease etiology. Here, we provide a comprehensive picture of the landscapes, causes, consequences and rejuvenation of mCAs at multiple scales, from cell to human population, by reviewing data from cytogenetic, genetic and genomic studies in cells, animal models (fly and mouse) and, more frequently, large-cohort populations. A detailed decoding of ageing genomes with a focus on mCAs may yield important insights into the genomic architecture of human ageing, accelerate the risk stratification of age-related diseases (particularly cancers) and development of novel targets and strategies for delaying or rejuvenating human (genome) ageing.
Keywords:Mosaicism  Genome ageing  Age-related diseases  Healthy ageing  Anti-ageing
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