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MR-Egger回归在孟德尔随机化分析中的应用
引用本文:徐艺耘,刘振球,樊虹,张欣,施婷婷,吴声,张铁军. MR-Egger回归在孟德尔随机化分析中的应用[J]. 复旦学报(医学版), 2021, 48(6): 804-809. DOI: 10.3969/j.issn.1672-8467.2021.06.013
作者姓名:徐艺耘  刘振球  樊虹  张欣  施婷婷  吴声  张铁军
作者单位:1 复旦大学公共卫生学院流行病学教研室 上海 200032;
2 复旦大学义乌研究院 义乌 322000
基金项目:科技部科技基础资源调查专项(2019FY101103);国家自然科学基金(81772170)
摘    要: 目的 探讨MR-Egger回归在孟德尔随机化分析中的应用。方法 利用全基因组关联研究结果确定工具变量,通过MR-Egger回归进行两样本孟德尔随机化分析来检验高密度脂蛋白胆固醇(high density liptein cholesterol,HDL-C)和冠状动脉疾病之间的因果效应,评估潜在工具变量的多效性,并将MR-Egger回归结果与逆方差加权法(inverse-variance weighted,IVW)结果进行比较。结果 共纳入120个单核苷酸多态性构建工具变量。IVW结果表明HDL-C与冠状动脉疾病之间存在显著的因果关联(OR=0.82,95% CI:0.75~0.89)。MR-Egger回归结果显示HDL-C与冠状动脉疾病之间不存在因果关联(OR=0.96,95% CI:0.83~1.11),并提示基因工具变量存在显著的多效性(截距:-0.01,P=0.008)。结论 MR-Egger回归在孟德尔随机化分析中有一定的应用价值,尤其是在多效性偏倚存在的情况下能给出准确的因果效应估计。

关 键 词:MR-Egger回归  孟德尔随机化分析  工具变量(IV)
收稿时间:2021-02-25

Application of MR-Egger regression in Mendelian randomization analysis
XU Yi-yun,LIU Zhen-qiu,FAN Hong,ZHANG Xin,SHI Ting-ting,WU Sheng,ZHANG Tie-jun. Application of MR-Egger regression in Mendelian randomization analysis[J]. Fudan University Journal of Medical Sciences, 2021, 48(6): 804-809. DOI: 10.3969/j.issn.1672-8467.2021.06.013
Authors:XU Yi-yun  LIU Zhen-qiu  FAN Hong  ZHANG Xin  SHI Ting-ting  WU Sheng  ZHANG Tie-jun
Affiliation:1 Department of Epidemiology, School of Public Health, Fudan University, Shanghai 200032, China;
2 Yiwu Research Institute, Fudan University, Yiwu 322000, Zhejiang Province, China
Abstract:Objective To explore the application of MR-Egger regression in Mendelian randomization analysis. Methods Instrumental variables were determined according to the results of genome-wide association study. A two-sample Mendelian randomization analysis was conducted by MR-Egger regression to examine the causal effect between high-density lipoprotein cholesterol (HDL-C) and coronary artery disease. The pleiotropy of potential instrumental variables was evaluated, and the results of MR-Egger regression and inverse-variance weighted (IVW) were further compared. Results A total of 120 single nucleotide polymorphisms were included to construct instrumental variables. The IVW results suggested a significant causal relationship between HDL-C and CAD (OR=0.82, 95%CI: 0.75-0.89), while the MR-Egger regression showed no causal association (OR=0.96, 95%CI: 0.83-1.11), with significant pleiotropy in instrumental variables (the intercept: -0.01, P=0.008). Conclusion MR-Egger regression is valuable in Mendelian randomization analysis, and can give an accurate estimate of the causal effect, especially in the case of pleiotropy bias existing.
Keywords:MR-Egger regression  Mendelian randomization analysis  instrumental variables (IV)
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