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Genome-wide association studies of antidepressant outcome: a brief review
Authors:Laje Gonzalo  McMahon Francis J
Institution:
  • Human Genetics Branch, Intramural Research Program, National Institute of Mental Health, NIH, US DHHS, Bethesda, MD, United States
  • Abstract:Genome-wide association studies (GWAS) of antidepressant treatment outcome have been at the forefront of psychiatric pharmacogenetics. Such studies may ultimately help match medications with patients, maximizing efficacy while minimizing adverse effects. The hypothesis-free approach of the GWAS has the advantage of interrogating genes that otherwise would have not been considered as candidates due to our limited understanding of their function, and may also uncover important regulatory variation within the large regions of the genome that do not contain protein-coding genes. Three independent samples have so far been studied using a genome-wide approach: The Sequenced Treatment Alternatives to Relieve Depression sample (STAR*D) (n = 1953), the Munich Antidepressant Response Signature (MARS) sample (n = 339) and the Genome-based Therapeutic Drugs for Depression (GENDEP) sample (n = 706). None of the studies reported results that achieved genome-wide significance, suggesting that larger samples and better outcome measures will be needed. This review discusses the published GWAS studies, their strengths, limitations, and possible future directions.
    Keywords:GWAS  Genome-wide association studies  STAR*D  Sequenced Treatment Alternatives to Relieve Depression  MARS  Munich Antidepressant Response Signature  GENDEP  Genome-based Therapeutic Drugs for Depression  MDD  Major depressive disorder  SNP  single nucleotide polymorphism  UBE3C  Ubiquitin protein ligase E3C  BMP7  Bone morphogenic protein 7  RORA  RAR-related orphan receptor alpha  CDH17  Cadherin-17  EPHB1  Ephrin type-B receptor 1  UST  Uronyl 2-sulphotransferase  IL11  interleukin-11  QIDS-SR  Quick Inventory of Depressive Symptomatology  Self Report  QIDS-C  Quick Inventory of Depressive Symptomatology  Clinician Rating  HAM-D  Hamilton Depression Rating Scale  HAM-A  Hamilton Anxiety Rating Scale  MADRS  Montgomery-Asberg Depression Rating Scale  FISER  Frequency and Intensity of Side Effects Rating  GRSEB  Global Rating of Side-Effect Burden  SCL-90-R  Symptom Checklist-90-Revised  BDI  Beck Depression Inventory  DSM-IV-TR  Diagnostic and Statistic Manual  fourth edition text revision  ICD-10  International Classification of Diseases 10th edition  LPR  linked polymorphic region [in the serotonin transporter gene]  SLC6A4  serotonin transporter  HTR2A  serotonin 2A receptor
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