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娑罗子基原物种的DNA条形码鉴定研究
引用本文:石召华,陈士林,姚 辉,叶利春,宋经元,关小羽,刘享平. 娑罗子基原物种的DNA条形码鉴定研究[J]. 中草药, 2013, 44(18): 2593-2599
作者姓名:石召华  陈士林  姚 辉  叶利春  宋经元  关小羽  刘享平
作者单位:1.武汉爱民制药有限公司,湖北 鄂州 436070 2.湖北省天然组分药物工程技术研究中心,湖北 鄂州 436070 3.中国中医科学院 中药研究所,北京 100700 4.中国医学科学院 北京协和医学院药用植物研究所,濒危药材繁育国家工程实验室,北京 100193
基金项目:湖北省重大科技攻关项目(2012BCA02)
摘    要:目的 筛选出适用于鉴定七叶树属药用植物的条形码序列。方法 考察了七叶树属10个物种42份样品的核ITS、ITS2与叶绿体psbA-trnHrbcLmatK序列的PCR扩增和测序效率、种内及种间变异、鉴定效率,对初筛后的序列进行barcoding gap检验及NJ树聚类分析。结果 psbA-trnH序列的PCR扩增和测序效率均为100%,种间最小变异大于其种内最大变异,且鉴定效率为候选序列中最高,barcoding gap检验结果表明该序列在种间、种内变异重合比例较小,且NJ树聚类分析结果也表明psbA-trnH序列能够提供充分的辨析效果。结论 psbA-trnH序列能准确鉴定七叶树属药用植物,可作为七叶树属药用植物条形码序列。

关 键 词:七叶树属;DNA条形码;物种鉴定;psbA-trnHrbcLmatK

DNA barcode identification of original species in Aesculus Linn.
SHI Zhao-hu,CHEN Shi-lin,YAO Hui,YE Li-chun,SONG Jing-yuan,GUAN Xiao-yu,LIU Xiang-ping. DNA barcode identification of original species in Aesculus Linn.[J]. Chinese Traditional and Herbal Drugs, 2013, 44(18): 2593-2599
Authors:SHI Zhao-hu  CHEN Shi-lin  YAO Hui  YE Li-chun  SONG Jing-yuan  GUAN Xiao-yu  LIU Xiang-ping
Affiliation:1.Wuhan Aimin Pharmaceutical Co., Ltd., Ezhou 436070, China 2.Hubei Engineering Technology Centre of Natural Component Medicine, Ezhou 436070, China 3.Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China 4.National Engineering Laboratory for Breeding of Endangered Medicinal Materials, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
Abstract:Objective To screen the DNA barcodes for identifying the species in genus Aesculus Linn. Methods The PCR amplification and sequencing efficacy, intraspecific and interspecific variation, and identification efficiency of nuclear ITS, ITS2, chlroplast psbA-trnH, rbcL, and matK sequences from 42 samples of 10 species in genus Aesculus Linn. were investigated. The screened sequences were determined by barcoding gap and NJ tree clustering analysis. Results The PCR amplification and sequencing efficacy of psbA-trnH were 100%, the interspecific minimum variation was larger than the intraspecific maximum variation, and psbA-trnH had the highest identification efficacy. The psbA-trnH sequence had less polymerization of intraspecific and interspecific variation. By constructing the NJ tree, thorough verifying the three original plants could be used to separate with other related species. Conclusion The psbA-trnH sequence is a powerful, though not perfect, barcode for the identification of species in Aesculus Linn.
Keywords:Aesculus Linn.   DNA barcode   species identification   psbA-trnH   rbcL   matK
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