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No association between XRCC1 and XRCC3 gene polymorphisms and breast cancer risk: Iowa Women's Health Study
Authors:Thyagarajan Bharat  Anderson Kristin E  Folsom Aaron R  Jacobs David R  Lynch Charles F  Bargaje Archana  Khaliq Waseem  Gross Myron D
Affiliation:University of Minnesota, Division of Epidemiology, Suite 300, West Bank Office Building, Minneapolis, MN 55454, United States.
Abstract:BACKGROUND: Genetic variation in DNA repair may contribute to differences in the susceptibility of several cancers. We evaluated two polymorphisms in the base excision repair pathway (BER) (XRCC1; Arg194Trp and Arg399Gln) and one polymorphism in the double strand DNA repair pathway (XRCC3; Thr241Met) for their association with breast cancer risk. METHODS: The association was analyzed in a nested case control study of 460 breast cancer cases and 324 cancer-free controls within the Iowa Women's Health Cohort. DNA was obtained from blood samples or paraffin embedded tissues (PET) and all samples were genotyped by one of three genotyping platforms-PCR-RFLP, PCR-INVADER, or Sequenom. RESULTS: None of the three polymorphisms studied were significantly associated with breast cancer risk (XRCC1: Arg194Trp (OR=1.21, 95% CI: 0.78-1.88); Arg399Gln (OR=1.20, 95% CI: 0.80-1.79); XRCC3: Thr241Met (OR=1.04, 95% CI: 0.76-1.41). CONCLUSIONS: These results suggest that independently these polymorphisms of XRCC1 and XRCC3 genes do not contribute significantly to the genetic susceptibility of breast cancer.
Keywords:BER, base excision repair   HR, homologous recombination   PCR, polymerase chain reaction   PET, paraffin embedded tissue   RFLP, restriction fragment length polymorphism   SNP, single nucleotide polymorphism
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