共调控基因谱挖掘在基因表达数据功能关联分析中的应用 |
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引用本文: | 李冬果,华琳,郑卫英,闫岩,刘红,张金旺.共调控基因谱挖掘在基因表达数据功能关联分析中的应用[J].中国优生与遗传杂志,2009(11):8-9. |
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作者姓名: | 李冬果 华琳 郑卫英 闫岩 刘红 张金旺 |
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作者单位: | 首都医科大学数学教研室,北京100069 |
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基金项目: | 本项目为北京市教育委员会科技发展计划面上项目,项目编号为:KM200910025006 |
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摘 要: | 在基因表达数据中,常采用关联模式发现(APD)方法来识别共调控基因。但这些方法不能发现潜在的隐藏模式。我们提出挖掘共调控基因谱的方法,结果显示这种方法不但可以可以发现隐藏的模式,还可以发现模式中含有的生物学相关信息。此方法优于传统的APD方法和双向聚类法。
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关 键 词: | 基因谱 关联 功能 |
Mining co-regulation gene patterns to perform function association analysis for gene expression data |
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Institution: | LI Dong - guo , HUA Lin, ZHENGWei - ying, YAN Yan, LIU Hong, ZHANG Jin - wang. ( Department of Mathematics, Capital University of Medical Science, Beijing 100069) |
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Abstract: | Association Pattern Discovery(APD)methods are often used to identify co-regulation genes for gene expression data.However,these methods can not discover those latent hidden patterns.Accordingly,we proposed a method to perform function association analysis by mining co-regulation gene patterns in this paper,which not only can discover those hidden co-regulation patterns but also can discovery many relevant biology information.Our method is prior to traditional APD methods and bicluster methods. |
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Keywords: | Gene patterns Association Function |
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