Initial steps of inactivation at the K+ channel selectivity filter

K⁺ efflux through K⁺ channels can be controlled by C-type inactivation, which is thought to arise from a conformational change near the channel’s selectivity filter. Inactivation is modulated by ion binding near the selectivity filter; however, the molecular forces that initiate inactivation remain unclear. We probe these driving forces by electrophysiology and molecular simulation of MthK, a prototypical K⁺ channel. Either Mg²⁺ or Ca²⁺ can reduce K⁺ efflux through MthK channels. However, Ca²⁺, but not Mg²⁺, can enhance entry to the inactivated state. Molecular simulations illustrate that, in the MthK pore, Ca²⁺ ions can partially dehydrate, enabling selective accessibility of Ca²⁺ to a site at the entry to the selectivity filter. Ca²⁺ binding at the site interacts with K⁺ ions in the selectivity filter, facilitating a conformational change within the filter and subsequent inactivation. These results support an ionic mechanism that precedes changes in channel conformation to initiate inactivation.Potassium (K⁺) channels are activated and opened by a variety of stimuli, including ligand binding and transmembrane voltage, to enable K⁺ efflux and thus, modulate physiological processes related to electrical excitability, such as regulation of action potential firing, smooth muscle contraction, and hormone secretion (1). In addition, many K⁺ channels are further controlled by a gating phenomenon known as C-type inactivation, in which K⁺ conduction is stopped, despite the continued presence of an activating stimulus (2). The mechanisms underlying C-type inactivation in voltage-gated K⁺ channels (Kv channels) are linked to both intracellular and extracellular permeant ion concentrations, and several lines of evidence have suggested that C-type inactivation is associated with a conformational change near the external mouth of the K⁺ channel pore (i.e., at the canonical K⁺ channel selectivity filter) (3–11).In Shaker Kv channels, C-type inactivation is known to be enhanced and recovery from inactivation is slowed by impermeant cations accessing the cytoplasmic side of the channel (5, 6, 10). Enhancement of inactivation by these cations suggests a working hypothesis, in which the impermeant ion prevents refilling of the selectivity filter with K⁺ (6). Thus, K⁺ presumably dissociates from the filter to the external solution, and this vacancy leaves the filter susceptible to a conformational change that underlies the nonconducting, inactivated state. However, the physical basis for the relation between ion movements and C-type inactivation as well as the structural underpinnings of the mechanism remain unclear.Here, we use divalent metal cations (Mg²⁺, Ca²⁺, and Sr²⁺) as probes of inactivation mechanisms in MthK, a model K⁺ channel of known structure (Fig. 1) (12–14). Specifically, we analyze conduction and gating of single MthK channels by electrophysiology combined with analysis of ion and protein movements by molecular simulation. Our electrophysiological experiments indicate that, although each of these divalent metal ions can reduce the size of single channel currents, only Ca²⁺ and Sr²⁺ can enhance inactivation, whereas Mg²⁺ does not. Using molecular simulation and potential of mean force (PMF) calculations, we find that Ca²⁺, but not Mg²⁺, can shed its hydration shell waters to access a site, termed S5, at the entry to the channel’s selectivity filter (Fig. 1C) after displacement of K⁺ ions to the extracellular side of the channel. Subsequent dissociation of a K⁺ ion from the filter, in turn, favors a conformational change within the selectivity filter, contributing to enhanced inactivation. These results support a working hypothesis that directly relates dissociation of K⁺ with a structural change in the selectivity filter to initiate inactivation of K⁺ channels.Open in a separate windowFig. 1.Structure and activation properties of MthK. (A) Presumed biological structure of MthK shown as a Cα-trace [Protein Data Bank (PDB) ID code 3RBZ]. The channel consists of a transmembrane pore domain tethered to a ring of RCK domains, which mediate channel activation by cytoplasmic Ca²⁺ (green spheres). The gray-shaded region represents the presumed plasma membrane; dashed lines represent the linker region between the pore and RCK gating ring that is unresolved in the crystal structure. (B) High-resolution structure of the MthK pore domain, with the selectivity filter shown in ball and stick representation (PDB ID code 3LDC). Subunits in the front and back have been removed for clear visualization of the conduction pathway (inside dashed rectangle), with K⁺ ions shown as purple spheres and ordered water molecules shown as red spheres. (C) –Magnified view of the MthK conduction pathway (boxed region in B) with potential ion binding sites (S0–S_cav) indicated. (D) Po vs. [Ca²⁺] (black symbols) and [Cd²⁺] (red symbols) from currents recorded at −100 mV. MthK activation requires ∼20-fold lower [Cd²⁺] compared with [Ca²⁺]. Curves represent fits with a Hill equation with the following parameters: EC₅₀ = 1.0 mM and n_H = 9.5 for Ca²⁺; EC₅₀ = 49 μM and n_H = 8.4 for Cd²⁺. (E) Representative single channel currents from reconstituted MthK at depolarized voltages with 200 mM KCl at both sides of the membrane and Ca²⁺ or Cd²⁺ at the cytoplasmic side of the channel as indicated. Cd²⁺ can fully activate MthK at concentrations that produce much less fast blockade than Ca²⁺. O and C indicate open and closed current levels, respectively. (F) Unitary current vs. voltage for MthK channels activated with 30 and 100 μM Cd²⁺ (green and red, respectively) and 2 mM Ca²⁺ (black). Smooth curves are drawn for display only; 100 μM Cd²⁺ results in nominal levels of fast blockade, yielding large outward current.