Polymorphisms at locus D1S80 and other hypervariable regions in the analysis of Eastern European ethnic group relationships |
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| Authors: | D A Verbenko P A Slominsky V A Spitsyn N A Bebyakova E K Khusnutdinova A I Mikulich |
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| Institution: | 1. Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russiadav@img.ras.ru;3. Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia;4. Medical and Genetics Scientific Centre, Russian Academy of Medical Sciences, Moscow, Russia;5. Northern State Medical University, Arkhangelsk, Russia;6. Institute of Biochemistry and Genetics, Ural Branch of Russian Academy of Sciences, Ufa, Russia;7. Institute of Art History, Ethnography and Folklore, National Academy of The Republic of Belarus, Minsk, Belarus |
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| Abstract: | Background: It has been hypothesized that, whereas many loci are used to generate phylogenetic relationships, the utilization of those that yield the most information could increase the accuracy of any multilocus phylogenetic reconstruction. Among these is the D1S80 hypervariable minisatellite region, which has been shown to be highly polymorphic globally, and it was of interest to compare the nearest neighbours and distant populations of Eastern Europe using the D1S80 polymorphism.Aim: The study evaluated the capacity of the D1S80 locus to discriminate between populations from different ethnic groups in Russia and the Republic of Belarus, revealing the polymorphism parameters of the populations studied.Subjects and methods: Hypervariable D1S80 minisatellite polymorphism was studied in 15 populations, belonging to six distinct ethnic groups from the Russian Federation (Russians, Komis, Maris, Udmurts, Kalmyks, and Yakuts) and the Republic of Belarus (Byelorussians). The data were analysed with other results reported for D1S80 polymorphism among Eastern Europeans, and were analysed together with those previously reported for Eastern European populations for the 3′ApoB, DMPK, DRPLA, and SCA1 hypervariable loci. Genetic diversity analysis was carried out using multidimensional scaling (MDS) of Nei's genetic distances.Results: The Eastern Slavonic populations (Russians, Ukrainians, and Byelorussians) are closely associated, and outermost from populations of Asian origin (Kalmyks and Yakuts). The populations that inhabit the Volga–Ural region (Udmurt, Komi, Mari, and Bashkir ethnic groups) revealed intermediate characteristics.Conclusion: The clustering of populations demonstrated here using D1S80 alone coincides with the analysis of five hypervariable region (HVR) loci, and is consistent with linguistic, geographic, and ethnohistorical data. These results are in agreement with most studies of mtDNA, Y-chromosomal, and autosomal DNA diversity in Eastern Europe. The D1S80 locus is convenient for population analyses, and may be used as part of a set of similar markers, which should allow the easy resolution of small differences in population structures. |
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| Keywords: | Genetic diversity hypervariable DNA polymorphisms D1S80 ethnic groups |
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