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RNA sequencing steps toward the first line
Authors:Theresa A Boyle MD  PhD  Aaron D Bossler MD  PhD
Institution:Department of Pathology, Moffitt Cancer Center, Tampa, Florida, USA
Abstract:
  • DNA is the sequence that codes for proteins.
  • Messenger RNA is transcribed from the DNA sequence of genes and translated into protein.
  • It can be difficult to predict how a change in the DNA sequence will affect messenger RNA and protein quantity and quality.
  • DNA translocation changes can cause the joining of sequences from two different genes or different parts of the same gene.
  • DNA sequencing is often used clinically to predict how DNA changes might affect proteins.
  • Alternatively, RNA sequencing can be used as a more direct measure of the effect of DNA changes on the protein products.
  • This sequencing is important for identifying changes in cancer that may indicate response to targeted therapy, prognosis, or diagnosis.
Keywords:biomarkers  fusion protein  next-generation sequencing (NGS)  nonsmall cell lung cancer  RNA sequencing  splice variant  targeted therapy  translocation
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