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无标记探针技术检测IL-6基因启动子单核苷酸多态性
引用本文:郜莉娜,尤崇革,潘云燕,李光迪,王芳芳.无标记探针技术检测IL-6基因启动子单核苷酸多态性[J].第四军医大学学报,2009(16):1484-1487.
作者姓名:郜莉娜  尤崇革  潘云燕  李光迪  王芳芳
作者单位:兰州大学第二医院检验科;
摘    要:目的:探讨无标记探针技术检测IL-6基因启动子单核苷酸多态性(SNP)的实用性.方法:采用新型荧光染料EvaGreen和无标记探针技术对IL-6基因启动子SNP进行基因分型.以其-597G〉A位点为例设计PCR扩增引物和无标记探针,按PCR扩增效率和产物特异性进行Mg^2+浓度、不对称PCR引物比例以及模板浓度等条件的优化.并用此优化体系基因分型100例临床标本,杂合型与突变型以测序验证.结果:结果显示EvaGreen荧光PCR检测体系是最适Mg^2+浓度为2.5mmol/L,不对称PCR引物比例为0.1/0.5umol/L,模板浓度为10ng/10uL的两步法不对称PCR.该体系对100例样本进行IL-6基因~597G〉A位点基因分型,发现7例杂合型和1例突变型,经测序与检测结果一致.结论:无标记探针技术检测基因SNP是一种值得推广的简便易行、低成本、常规化的基因分型方法.

关 键 词:白细胞介素6  EvaGreen  无标记探针  多态性  单核苷酸

Unlabeled probe genotyping for detection of single nucleotide polymorphism of IL-6 promoter
GAO Li-Na,YOU Chong-Ge,PAN Yun-Yan,LI Guang-Di,WANG Fang-Fang Clinical Laboratory,Second Hospital of Lanzhou University,Lanzhou ,China.Unlabeled probe genotyping for detection of single nucleotide polymorphism of IL-6 promoter[J].Journal of the Fourth Military Medical University,2009(16):1484-1487.
Authors:GAO Li-Na  YOU Chong-Ge  PAN Yun-Yan  LI Guang-Di  WANG Fang-Fang Clinical Laboratory  Second Hospital of Lanzhou University  Lanzhou  China
Institution:GAO Li-Na,YOU Chong-Ge,PAN Yun-Yan,LI Guang-Di,WANG Fang-Fang Clinical Laboratory,Second Hospital of Lanzhou University,Lanzhou 730030,China
Abstract:AIM:To study the practicality of using unlabeled probe genotyping for detecting single nucleotide polymorphism(SNP)of IL-6 gene promoter.METHODS:SNP of IL-6 gene promoter was genotyped with a new fluorescent dye EvaGreen and the latest unlabeled probe technique,and the PCR primers and unlabeled probe were designed on the SNP site-597G>A of IL-6 gene promoter.The PCR amplification system was optimized,including the concentration of Mg2+,the ratio of asymmetric PCR primer,the lowest concentration of template ...
Keywords:intekleukin-6  EvaGreen  unlabeled probes  polymorphism  single nucleotide  
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