Nomenclature for factors of the HLA system, update May 2009 |
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Authors: | Compiled by Steven G E Marsh |
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Institution: | HLA Typing Laboratory, Blood Center of Zhejiang Province, Hangzhou, Zhejiang Province, China; Key Laboratory of Blood Safety Research, Ministry of Health, Hangzhou, Zhejiang Province, China; Medical Testing Laboratory, The Center Hospital of Yuncheng, Yuncheng, Shanxi Province, China |
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Abstract: | Major histocompatibility complex class I chain-related gene A ( MICA ) is located 46 kb centromeric to HLA-B locus and encodes a stress-inducible protein. MICA allelic variation is thought to be associated with disease susceptibility and immune response to transplants. In this study, polymerase chain reaction sequence-based typing (PCR-SBT) method for MICA alleles has been established. Genomic DNAs from 100 healthy Chinese Han individuals were typed for MICA alleles by this method. The microsatellite polymorphism in the exon 5 of MICA gene, MICA * Del allele, and human leukocyte antigen-B alleles was also detected by the polymerase chain reaction–GeneScan, polymerase chain reaction sequence-specific primer, and PCR-SBT methods, respectively. Fourteen MICA alleles were found in the population, with MICA * 00801/04 having the highest frequency of 27.0%. MICA * A4 , * A5 , * A5.1 , * A6 , and * A9 microsatellites were identified. Two samples with HLA-B * 4801 were MICA * Del positive, with the frequency of 1.0%. The data showed that the new PCR-SBT method for MICA alleles was reliable and Chinese Han population was distinct in distribution of MICA alleles. |
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Keywords: | allele frequency major histocompatibility complex class I chain-related gene A sequence-based typing short tandem repetition |
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