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Genetic variability in the coat protein gene of Potato virus X and the current relationship between phylogenetic placement and resistance groupings
Authors:Belinda A Cox  Roger A C Jones
Institution:(1) Western Australian State Agricultural Biotechnology Centre, Murdoch University, Perth, WA, 6150, Australia;(2) Department of Agriculture and Food, Bentley Delivery Centre, Locked Bag No. 4, Perth, WA, 6983, Australia;
Abstract:The complete coat protein nucleotide sequences of 11 Potato virus X isolates from Australia and two from Britain were compared to those of 72 others. On phylogenetic analysis, clade I contained all 11 Australian sequences, and sub-clade II-1 contained the two new British sequences. Clade I isolates were from six different continents, but those in sub-clades II-1 and II-2 were only from Europe and the Americas, respectively. Clade I contained isolates in strain groups 1, 3 and 4, and sub-clades II-1 and II-2, isolates in strain groups 2 and 4. Thus, strain group 4 now occurs within both clades.
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