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A homozygous variant in RRM2B is associated with severe metabolic acidosis and early neonatal death
Authors:Brent A. Penque  Leila Su  Jianghai Wang  Weizhen Ji  Allen Bale  Frank Luh  Robert K. Fulbright  Uzair Sarmast  Annalisa G. Sega  Monica Konstantino  Michele Spencer-Manzon  Richard Pierce  Yun Yen  Saquib A. Lakhani
Affiliation:1. Pediatric Genomics Discovery Program, Department of Pediatrics, Section of Critical Care Medicine, Yale University School of Medicine, New Haven, CT, USA;2. Department of Genetics, Yale University School of Medicine, New Haven, CT, USA;3. Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, USA;4. Department of Cancer Biology and Drug Discovery, College of Medical Technology, Taipei Medical University, Taipei, 110, Taiwan;5. Sino-American Cancer Foundation, Temple City, CA, USA
Abstract:RRM2B encodes the crucial p53-inducible ribonucleotide reductase small subunit 2 homolog (p53R2), which is required for DNA synthesis throughout the cell cycle. Mutations in this gene have been associated with a lethal mitochondrial depletion syndrome. Here we present the case of an infant with a novel homozygous p.Asn221Ser mutation in RRM2B who developed hypotonia, failure to thrive, sensorineural hearing loss, and severe metabolic lactic acidosis, ultimately progressing to death at 3 months of age. Through molecular modeling using the X-ray crystal structure of p53R2, we demonstrate that this mutation likely causes disruption of a highly conserved helix region of the protein by altering intramolecular interactions. This report expands our knowledge of potential pathogenic RRM2B mutations as well as our understanding of the molecular function of p53R2 and its role in the pathogenesis of mitochondrial DNA depletion.
Keywords:Corresponding author. Department of Pediatrics, Yale University School of Medicine, 333 Cedar Street, PO Box 208064, New Haven, CT 06520-8064, USA.  p53R2  Ribonucleotide reductase  Mitochondrial DNA depletion  Lactic acidosis  p53R2  p53-inducible ribonucleotide reductase small subunit 2 homolog  RNR  Ribonucleotide reductase  R1  RNR large subunit  R2  RNR small subunit  dNTPs  deoxyribonucleotide triphosphates  PICU  pediatric intensive care unit  OH  hydroxyl  CONH2  carboxamide  ms  millisecond  SNV  single nucleotide variant  GATK  Genome Analysis Toolkit  SIFT  Sorting Intolerant from Tolerant  CADD  Combined Annotation Dependent Depletion  PolyPhen2  Polymorphism Phenotyping v2
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