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基于COI 条形码序列的蛤蚧及其混伪品的DNA 分子鉴定
引用本文:张红印,石林春,刘冬,贾静,陈俊,张辉.基于COI 条形码序列的蛤蚧及其混伪品的DNA 分子鉴定[J].世界科学技术-中医药现代化,2014,16(2):269-273.
作者姓名:张红印  石林春  刘冬  贾静  陈俊  张辉
作者单位:长春中医药大学 长春 130117;中国医学科学院/北京协和医学院/药用植物研究所 北京 100193;长春中医药大学 长春 130117;长春中医药大学 长春 130117;中国医学科学院/北京协和医学院/药用植物研究所 北京 100193;长春中医药大学 长春 130117
基金项目:吉林省财政厅高等教育专项(2050205):药用动物DNA 条形码鉴定技术,负责人:张辉。
摘    要:目的:利用COI 序列对蛤蚧药材及其常见混伪品进行DNA 条形码鉴定,为蛤蚧药材鉴定提供新的方法。方法:以COI 作为条形码序列,对蛤蚧实验样品进行DNA 提取,PCR 扩增和双向测序,用MEGA6.0 对所有11 个物种的103 份样品进行序列比对和邻接(NJ)树构建。结果:所有实验样品均可以获得COI 序列,蛤蚧COI 序列种内平均K2P 距离为0.005,种内最大K2P 距离为0.013,基于COI 序列构建的NJ 树中蛤蚧单独聚在一支,与其混伪品可以相互区分。结论:运用COI 条形码序列能够准确鉴定蛤蚧及其混伪品,为保障蛤蚧药材临床用药安全和市场监管提供新的方法。

关 键 词:蛤蚧  DNA  条形码  COI  鉴定
收稿时间:2/7/2014 12:00:00 AM
修稿时间:2014/2/19 0:00:00

Identification of Gekko geeko Linnaeus and Adulterants Using the COI Barcode
Zhang Hongyin,Shi Linchun,Liu Dong,Jia Jing,Chen Jun and zhang Hui.Identification of Gekko geeko Linnaeus and Adulterants Using the COI Barcode[J].World Science and Technology-Modernization of Traditional Chinese Medicine,2014,16(2):269-273.
Authors:Zhang Hongyin  Shi Linchun  Liu Dong  Jia Jing  Chen Jun and zhang Hui
Institution:Changchun University of Chinese Medicine, Changchun 130117, China;Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, China;Changchun University of Chinese Medicine, Changchun 130117, China;Changchun University of Chinese Medicine, Changchun 130117, China;Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, China;Changchun University of Chinese Medicine, Changchun 130117, China
Abstract:DNA barcoding technology is widely opplied for species identification and discovery by using short and standard fragments of DNA sequences. In this study, the cytochrome c oxidase subunit 1 (COI) sequence as a DNA barcode was used to identify the Gekko gecko Linnaeus medicinal materials and adulterants in order to provide a new identification method of G. gecko Linnaeus. Genomic DNA was extracted from the experimental samples. The COI regions of nrDNA were amplified using polymerase chain reaction and sequenced bidirectionally. The alignment and NJ tree construction were performed in MEGA6.0. COI sequences can be obtained from all samples. The average intra-specific K2P distance of G. gecko Linnaeus was 0.005 and the maximum intra-specific distance was 0.013. All the G. gecko Linnaeus medicinal samples clustered into a clade in the NJ tree and can be distinguished from the adulterants. In a conclusion, COI can be used to correctly identify G. gecko Linnaeus, and it will be a potential DNA barcode for identification of other animal medicinal materials.
Keywords:Gekko gecko Linnaeus  COI  DNA barcoding  identification
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