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基因芯片高通量检测乙型肝炎病毒拉米夫定耐药株及对其突变热点的分析
引用本文:李兵,周伯平,彭劲甫,陈立炎,李丽雄,王召钦,王敏,刘赛云,蒋小玲. 基因芯片高通量检测乙型肝炎病毒拉米夫定耐药株及对其突变热点的分析[J]. 中华肝脏病杂志, 2004, 12(11): 673-676
作者姓名:李兵  周伯平  彭劲甫  陈立炎  李丽雄  王召钦  王敏  刘赛云  蒋小玲
作者单位:1. 518020,深圳市东湖医院、深圳市肝病研究所
2. 深圳市益生堂生物企业有限公司
摘    要:目的 通过大规模、多位点检测深圳地区拉米夫定耐药株,进一步了解拉米夫定耐药突变的各种分布状况。方法 用基因芯片法对552份乙型肝炎患者血清进行检测,得出l92份拉米夫定耐药突变标本,再对192份耐药标本检测结果进行分析。结果 192份耐药标本中,191份YMDD突变,124份528位点突变,9份555位点突变。YMDD突变中88%为:YVDD、528位点同时突变;YIDD单独突变;YIDD、528位点同时突变。YMDD突变密码子91%为:GTG、ATT;9%为:ATA、ATC。结论 552位点(YMDD)突变为核心突变,528、555位点的突变为协同突变。YVDD突变总是与528位点同时出现;YIDD突变则表现为多样化。YMDD突变密码子约有9%为少见密码子ATA、ATC,这可能是传统聚合酶链反应法检测YMDD突变阳性率较低的原因。

关 键 词:基因芯片 高通量检测 乙型肝炎病毒 拉米夫定耐药株 基因突变
修稿时间:2003-12-26

High-flux detection of HBV lamivudine resistant strains by genechip and analysis of mutant hotspots in those strains
LI Bing",ZHOU Bo-ping,PENG Jin-fu,CHEN Li-yan,LI Li-xiong,WANG Zhao-qin,WANGMin,LIU Sai-yun,JIANG Xiao-ling. "Shenzhen Eastlake Hospital,Shenzhen ,China. High-flux detection of HBV lamivudine resistant strains by genechip and analysis of mutant hotspots in those strains[J]. Chinese journal of hepatology, 2004, 12(11): 673-676
Authors:LI Bing"  ,ZHOU Bo-ping,PENG Jin-fu,CHEN Li-yan,LI Li-xiong,WANG Zhao-qin,WANGMin,LIU Sai-yun,JIANG Xiao-ling. "  Shenzhen Eastlake Hospital,Shenzhen ,China
Affiliation:Shenzhen Eastlake Hospital, Shenzhen 518020, China.
Abstract:Objective Lamivudine resistant HBV strains in Shenzhen were detected at multiple sites and in large amounts to understand further the distribution of lamivudine resistant mutants. Methods 552 Hepatitis B patients' sera were examined using genechip method. Among them, 192 samples of lamivudine resistant mutant were further analyzed. Results In those 192 lamivudine resistant samples, 191 were YMDD mutants, 124 mutants of codon 528 and 9 mutants of codon 555. 88% YMDD mutants were multi-mutants of YVDD and codon 528; single mutants of YIDD; multi-mutants of YIDD and codon 528. 91% codon of YMDD mutants were GTG, ATX; the other 9% were ATA, ATC. Conclusions These results suggest that mutants of codon 552 (YMDD) are core mutants. Mutants of codon 528 and 555 are incidental mutants, YVDD mutants always emerge with mutants of codon 528, but YIDD mutants appear differently. 9% YMDD mutants' codons are ATA or ATC. This may be the reason for the low positive rate shown by using the conventional PCR methods.
Keywords:Hepatitis B virus  Lamivudine  Codon  Mutation  Oligonucleotide array sequence analysis
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