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Recalibrated estimates of non-bacteremic and bacteremic pneumococcal community acquired pneumonia in hospitalized Canadian adults from 2010 to 2017 with addition of an extended spectrum serotype-specific urine antigen detection assay
Institution:1. Canadian Center for Vaccinology (CCfV), IWK Health Centre, Nova Scotia Health Authority (NSHA), and Dalhousie University, Halifax, Nova Scotia, Canada;2. Division of Microbiology, Department of Pathology and Laboratory Medicine, Nova Scotia Health Authority (NSHA), Halifax, Nova Scotia, Canada;3. National Microbiology Laboratory (NML), Public Health Agency of Canada (PHAC), Winnipeg, Manitoba, Canada;4. Centre Hospitalier Universitaire de Québec, Québec, Québec, Canada;5. Vancouver General Hospital, and University of British Columbia, Vancouver, British Columbia, Canada;6. Mount Sinai Hospital, Toronto, Ontario, Canada;7. Public Health Ontario and University of Toronto, Toronto, Ontario, Canada;8. McMaster University, Hamilton, Ontario, Canada;9. Ottawa Hospital General Campus and University of Ottawa, Ottawa, Ontario, Canada;10. McGill University Health Centre, Montreal, Québec, Canada;11. Centre Intégré Universitaire de Santé et de Services Sociaux de l’Estrie – Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Québec, Canada;12. Saint John Regional Hospital, Saint John, New Brunswick, Canada
Abstract:Objective(s)In the context of age- and risk-based pneumococcal vaccine recommendations in Canada, this study presents updated data from active surveillance of pneumococcal community acquired pneumonia (pCAP) and invasive pneumococcal disease (IPD) in hospitalized adults from 2010 to 2017.MethodsS. pneumoniae was detected using culture (blood and sputum), and urine antigen detection (UAD). Serotyping was performed with Quellung, PCR, or using the PCV13- and PPV23 (non-PCV13)-specific UADs. Laboratory results, demographic, and outcome data were categorized by age (16–49, 50–64, and 65 + ) and by disease non-bacteremic pCAP, bacteremic pCAP, and IPD(non-CAP)].Results11,129 CAP cases and 216 cases of IPD (non-CAP) were identified. Laboratory testing for S. pneumoniae was performed in 8912 CAP cases, identifying 1264 (14.2%) as pCAP. Of pCAP cases, 811 (64.1%) were non-bacteremic and 455 (35.9%) were bacteremic. Adults 65 + years represented 54.5% of non-bacteremic pCAP, 41.4% of bacteremic pCAP, and 48.6% of IPD cases. Adults 50–64 years contributed 30.3%, 33.1%, and 29.9%, respectively. In pCAP, PCV13 serotypes declined between 2010 and 2014 due to declines in serotypes 7F and 19A, then plateaued from 2015 to 2017 with persistence of serotype 3. In later study years, non-bacteremic pCAP was predominant, and PPV23 (non-PCV13) serotypes increased from 2015 to 2017, with serotypes 22F, 11A, and 9 N being most frequently identified. Compared to non-pCAP, pCAP cases were more likely to be admitted to intensive care units and require mechanical ventilation. These outcomes and mortality were more common in bacteremic pCAP and IPD, versus non-bacteremic pCAP.Conclusion(s)Along with IPD, pCAP surveillance (bacteremic and non-bacteremic) is important as their trends may differ over time. With insufficient herd protection from PCV13 childhood immunization, or use of PPV23 in adults, this study supports direct adult immunization with PCV13 or higher valency conjugate vaccines to reduce the residual burden of pCAP and IPD.
Keywords:Community-acquired pneumonia (CAP)  Non-bacteremic  Invasive pneumococcal disease (IPD)  Vaccine  Serotype  Adult  Burden  Urine antigen  BMI"}  {"#name":"keyword"  "$":{"id":"k0055"}  "$$":[{"#name":"text"  "_":"Body mass index  CAP"}  {"#name":"keyword"  "$":{"id":"k0065"}  "$$":[{"#name":"text"  "_":"community acquired pneumonia  CI"}  {"#name":"keyword"  "$":{"id":"k0075"}  "$$":[{"#name":"text"  "_":"confidence intervals  CIRN"}  {"#name":"keyword"  "$":{"id":"k0085"}  "$$":[{"#name":"text"  "_":"Canadian Immunization Research Network  ICU"}  {"#name":"keyword"  "$":{"id":"k0095"}  "$$":[{"#name":"text"  "_":"intensive care units  IPD"}  {"#name":"keyword"  "$":{"id":"k0105"}  "$$":[{"#name":"text"  "_":"invasive pneumococcal disease  LOS"}  {"#name":"keyword"  "$":{"id":"k0115"}  "$$":[{"#name":"text"  "_":"length of hospital stay  NACI"}  {"#name":"keyword"  "$":{"id":"k0125"}  "$$":[{"#name":"text"  "_":"National Advisory Committee on Immunization  non-pCAP"}  {"#name":"keyword"  "$":{"id":"k0135"}  "$$":[{"#name":"text"  "$$":[{"#name":"__text__"  "_":"CAP cases testing negative for "}  {"#name":"italic"  "_":"S  pneumoniae  NVTs"}  {"#name":"keyword"  "$":{"id":"k0145"}  "$$":[{"#name":"text"  "_":"serotypes not found in pneumococcal vaccines  or non-vaccine types  PCV7"}  {"#name":"keyword"  "$":{"id":"k0155"}  "$$":[{"#name":"text"  "_":"pneumococcal community acquired pneumonia (pCAP)  7-valent conjugate vaccine  PCV1"}  {"#name":"keyword"  "$":{"id":"k0165"}  "$$":[{"#name":"text"  "_":"13-valent pneumococcal conjugate vaccine  PCV15"}  {"#name":"keyword"  "$":{"id":"k0175"}  "$$":[{"#name":"text"  "_":"15-valent pneumococcal conjugate vaccine  PCV20"}  {"#name":"keyword"  "$":{"id":"k0185"}  "$$":[{"#name":"text"  "_":"20-valent pneumococcal conjugate vaccine  PPV23"}  {"#name":"keyword"  "$":{"id":"k0195"}  "$$":[{"#name":"text"  "_":"23-valent pneumococcal polysaccharide vaccine  SOS"}  {"#name":"keyword"  "$":{"id":"k0205"}  "$$":[{"#name":"text"  "_":"Serious Outcomes Surveillance  UAD"}  {"#name":"keyword"  "$":{"id":"k0215"}  "$$":[{"#name":"text"  "_":"urine antigen detection  UAD-1"}  {"#name":"keyword"  "$":{"id":"k0225"}  "$$":[{"#name":"text"  "_":"PCV13-specific UAD  UAD-2"}  {"#name":"keyword"  "$":{"id":"k0235"}  "$$":[{"#name":"text"  "_":"PPV23(non-PCV13)-specific UAD
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