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Structure and conformation of linear peptides VII.
Authors:V. LALITHA  R. MURALI  E. SUBRAMANIAN
Abstract:The tripeptide, L-valyl-glycyl-glycine (C9H17N3O4, molecular weight = 231), crystallizes in the monoclinic space group C2, with a = 24.058(3)Å, b = 4.801(1), c = 10.623(2), β = 110.02(1)° and Z = 4. The structure was determined by direct methods and refined to a final R-index of 0.043 for 830 reflections (sinθ/Λ ≤ 0.53 A-1) with I> 1.0s?. The molecule exists as a zwitterion. The peptide units are trans and one of them shows significant deviations from planarity (Δω2 = 9.3°). The peptide chain repeat distance, 1Cα-3Cα, is 7.23Å and the molecule displays a highly extended conformation with backbone torsion angles of ψ1 = 123.1°, ω1 = - 179.4°, ø2 = - 155.1°, ψ;2 = 154.7°, ω2 = 170.7°, ø3 = - 146.6° and ψ3 = 180.0°. For the valyl side chain, χ11 = - 52.5°, χ12 = 174.2°. The packing involves hydrogen-bonded interactions between successive molecules related by the β-translation of the lattice, giving rise to the familiar parallel β-sheet structure which appears to be the most extended one observed to date.
Keywords:conformation  crystal structure  parallel beta sheet  tripeptide  valyl-glycyl-glycine
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