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长江中下游地区菱属植物的DNA分子鉴别
引用本文:保曙琳,丁小余,常俊,沈洁,唐凤.长江中下游地区菱属植物的DNA分子鉴别[J].中草药,2004,35(8):926-930.
作者姓名:保曙琳  丁小余  常俊  沈洁  唐凤
作者单位:南京师范大学生命科学学院,江苏,南京,210097
基金项目:江苏省教育厅自然基金资助项目 ( 0 1KJB180 0 0 5 )
摘    要:目的 对野生菱和栽培菱种rDNA ITS片段进行分析,探讨该片段在两大群体中的系统学及鉴别研究意义。方法 对菱的rDNA ITS区进行了PCR扩增、测序,运用clustal、Mega 2.0等软件对ITs区进行序列分析鉴别。结果 获得rDNAI TS1、ITS2和5.8S rDNA完整序列,10个居群菱的ITS1与ITS2序列的长度分别为234~236 bp和220~221 bp,5.8S区均为164bp,不同居群的碱基差异为0.22%~2.94%。变异位点数为16个,信息位点数6个。用NJ法根据ITS序列数据构建系统发生树。结论 尽管菱属各居群间rDNA ITS的差异百分率较小,其亲缘关系较近,但根据ITS序列的特征可以很好地鉴别野生菱、栽培菱,菱属植物有可能都起源于同一种野生类居群。

关 键 词:菱属  rDNA  ITS序列  种质鉴别  物种起源
文章编号:0253-2670(2004)08-0926-05
收稿时间:2003/10/27 0:00:00

Identification of Trapa L. plants along middle-low reaches of Changjiang River by analyzing their DNA sequences
BAO Shu-lin,DING Xiao-yu,CHANG Jun,SHEN Jie and TANG Feng.Identification of Trapa L. plants along middle-low reaches of Changjiang River by analyzing their DNA sequences[J].Chinese Traditional and Herbal Drugs,2004,35(8):926-930.
Authors:BAO Shu-lin  DING Xiao-yu  CHANG Jun  SHEN Jie and TANG Feng
Institution:College of Life Science, Nanjing Normal University, Nanjing 210097, China;College of Life Science, Nanjing Normal University, Nanjing 210097, China;College of Life Science, Nanjing Normal University, Nanjing 210097, China;College of Life Science, Nanjing Normal University, Nanjing 210097, China;College of Life Science, Nanjing Normal University, Nanjing 210097, China
Abstract:Object To analyze the rDNA ITS sequences between wi ld plants and cultivars of Trapa L. and study the utility in p hylogenesis and identification of these two groups. Methods The ITS gene fragments were PCR amplified and sequenced. The rDNA ITS regions w ere analyzed by means of the software of Clustal and Mega 2.0. Result s The rDNA sequences of 234-236 bp ITS1, 220-221 bp ITS2 gene fragment , and 5.8 S rDNA for 164 bp evenly were obtained from ten populations of Trapa L. The intraspecific substitution varies from 0.22% to 2. 94%. The variable sites are 16 while informative sites are six. The phylogenet ic tree based on ITS data was set up by NJ method. Conclusion ITS sequence is a pretty good molecular marker which can identify wild plants of Trapa L. from their cultivars. Diversity of ITS in differen t populations is less at intraspecific level. It is infered that the plants of Trapa L. may be derived from the same population of one species .
Keywords:Trapa L    rDNA ITS sequences  spe cies identification  origin of species
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