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LINE-1 methylation in leukocyte DNA,interaction with phosphatidylethanolamine N-methyltransferase variants and bladder cancer risk
Authors:S M Tajuddin  A F S Amaral  A F Fernández  S Chanock  D T Silverman  A Tardón  A Carrato  M García-Closas  B P Jackson  E G Tora?o  M Márquez  R G Urdinguio  R García-Closas  N Rothman  M Kogevinas  F X Real  M F Fraga  N Malats  for the Spanish Bladder Cancer/EPICURO Study investigators
Abstract:

Background:

Aberrant global DNA methylation is shown to increase cancer risk. LINE-1 has been proven a measure of global DNA methylation. The objectives of this study were to assess the association between LINE-1 methylation level and bladder cancer risk and to evaluate effect modification by environmental and genetic factors.

Methods:

Bisulphite-treated leukocyte DNA from 952 cases and 892 hospital controls was used to measure LINE-1 methylation level at four CpG sites by pyrosequencing. Logistic regression model was fitted to estimate odds ratios (ORs) and 95% confidence intervals (95% CIs). Interactions between LINE-1 methylation levels and environmental and genetic factors were assessed.

Results:

The risk of bladder cancer followed a nonlinear association with LINE-1 methylation. Compared with subjects in the middle tertile, the adjusted OR for subjects in the lower and the higher tertiles were 1.26 (95% CI 0.99–1.60, P=0.06) and 1.33 (95% CI 1.05–1.69, P=0.02), respectively. This association significantly increased among individuals homozygous for the major allele of five single-nucleotide polymorphisms located in the phosphatidylethanolamine N-methyltransferase gene (corrected P-interaction<0.05).

Conclusions:

The findings from this large-scale study suggest that both low and high levels of global DNA methylation are associated with the risk of bladder cancer.
Keywords:bladder cancer  LINE-1 repetitive sequences  DNA methylation  one-carbon metabolism  epigenetic–  gene interaction
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