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Systematic assessment of the tagging polymorphisms of the COL1A1 gene for high myopia
Authors:Chung-Ling Liang  Kuo-Sheng Hung  Yueh-Ying Tsai  Wansu Chang  Hsin-Shih Wang  Suh-Hang Hank Juo
Affiliation:(1) Bright-Eyes Clinic, Kaohsiung, Taiwan;(2) Graduate Institute of Clinical Medical Sciences, Chang Gung University, Taoyuan, Taiwan;(3) Clinical Research Center, Taipei Medical University Wan Fang Hospital, Taipei, Taiwan;(4) Graduate Institute of Medical Genetics, Kaohsiung Medical University, 100 TzYou First Road, Kaohsiung, 807, Taiwan;(5) Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan;(6) Department of Medical Research, Mackay Memorial Hospital, Taipei, Taiwan
Abstract:Reduced scleral collagen accumulation has been found in the development of myopia. Single nucleotide polymorphisms (SNPs) at the type I collagen α-1 gene (COL1A1) may cause different susceptibilities to myopia. We conducted a case–control study to systematically examine COL1A1 as a candidate gene for high myopia. A case was defined as spherical refraction ≤−6 D and control ≥−1.5 D. The study comprised 471 cases and 623 controls, and ten tagging SNPs were genotyped. None of the SNPs reached the significant level of 0.05. Subset analysis on cases with a strong family history did not demonstrate significant results. We could not find an interaction between gene and near work. Exploratory analyses by changing the cutoff values to re-define cases and controls did not improve the results. Haplotype analysis did not yield significant association with myopia. This study failed to demonstrate COL1A1 as a significant risk factor for high myopia. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.
Keywords:SNP  COL1A1  Haplotype  Myopia  Case–  control study
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