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Ten years of dengue drug discovery: Progress and prospects
Authors:Siew Pheng Lim  Qing-Yin Wang  Christian G Noble  Yen-Liang Chen  Hongping Dong  Bin Zou  Fumiaki Yokokawa  Shahul Nilar  Paul Smith  David Beer  Julien Lescar  Pei-Yong Shi
Institution:1. Novartis Institute for Tropical Diseases, 10 Biopolis Road, 05-01 Chromos, Singapore 138670, Singapore;2. School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore
Abstract:To combat neglected diseases, the Novartis Institute of Tropical Diseases (NITD) was founded in 2002 through private–public funding from Novartis and the Singapore Economic Development Board. One of NITD’s missions is to develop antivirals for dengue virus (DENV), the most prevalent mosquito-borne viral pathogen. Neither vaccine nor antiviral is currently available for DENV. Here we review the progress in dengue drug discovery made at NITD as well as the major discoveries made by academia and other companies. Four strategies have been pursued to identify inhibitors of DENV through targeting both viral and host proteins: (i) HTS (high-throughput screening) using virus replication assays; (ii) HTS using viral enzyme assays; (iii) structure-based in silico docking and rational design; (iv) repurposing hepatitis C virus inhibitors for DENV. Along the developmental process from hit finding to clinical candidate, many inhibitors did not advance beyond the stage of hit-to-lead optimization, due to their poor selectivity, physiochemical or pharmacokinetic properties. Only a few compounds showed efficacy in the AG129 DENV mouse model. Two nucleoside analogs, NITD-008 and Balapiravir, entered preclinical animal safety study and clinic trial, but both were terminated due to toxicity and lack of potency, respectively. Celgosivir, a host alpha-glucosidase inhibitor, is currently under clinical trial; its clinical efficacy remains to be determined. The knowledge accumulated during the past decade has provided a better rationale for ongoing dengue drug discovery. Though challenging, we are optimistic that this continuous, concerted effort will lead to an effective dengue therapy.
Keywords:DENV  dengue virus  WNV  West Nile virus  YFV  yellow fever virus  TBEV  tick-borne encephalitis virus  HCV  hepatitis C virus  WEEV  Western equine encephalitis virus  VSV  vesicular stomatitis virus  HBV  hepatitis B virus  HIV  human immunodeficiency virus  DAA  direct antiviral agent  PI  protease inhibitors  HTS  high-throughput screening  MTase  methyltransferase  RdRp  RNA-dependent RNA polymerase  NI  nucleoside analog inhibitors  NNI  non-nucleoside inhibitor  PoC  proof-of-concept  TI  therapeutic index  SAR  structure&ndash  activity relationship  ER  endoplasmic reticulum  DHF/DSS  dengue hemorrhagic fever/dengue shock syndrome  SPA  scintillation proximity assay  FP  fluorescence polarization
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