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ABO genotyping of various hematopoietic cell lines to select model cells for research purposes
Authors:Kensaku Aki  Azusa Izumi  Wataru Oboshi  Atsumi Sone  Masao Hirose  Eiji Hosoi
Affiliation:1. Department of Cells and Immunity Analytics, Subdivision of Biomedical Laboratory Sciences, Division of Health Science, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan;2. Clinical Laboratory, Mie Prefectural Shima Hospital, Mie, Japan;3. Department of Medical Technology and Sciences, International University of Health and Welfare, Chiba, Japan;4. Subdivision of Biomedical Laboratory Sciences, Graduate School of Health Sciences, Tokushima University, Tokushima, Japan;5. Naruto University of Education Graduate School, Tokushima, Japan
Abstract:Various cells from humans and animals have been established as cell lines, and their features, characteristics, and origins have been reported. Many laboratories use cell lines as model cells, which are selected to suit research purposes.We attempted to identify the ABO genotypes of 31 human leukemia and lymphoma cell lines stored in our laboratory using three methods: the PCR amplification of specific alleles (PASA), PCR-restriction fragment length polymorphism (RFLP), and the direct DNA sequencing of PCR products.We distinguished 31 human leukemia and lymphoma cell lines examined into six major ABO genotypes: A/O (A101/O01: n = 1, A101/O12: n = 4, A101/O26: n = 1, A101/O49: n = 1, A102/O01: n = 3), A/A (A101/A101: n = 1, A102/A102: n = 2), B/O (Bw29/O01: n = 1), B/B (B101/B101: n = 2), O/O (O01/O01: n = 9, O01/O02: n = 1, O01/O26: n = 1, O02/O03: n = 1), and A/B (A102/B101: n = 3).To the best of our knowledge, this is the first study to identify the ABO genotypes of various cell lines. The ABO genotypes of cell lines are important when selecting an experimental model cell for an ABO blood group study, and are essential information for cell lines. These results may be employed by research and clinical laboratories as well as in the forensic field.
Keywords:Corresponding author at: Department of Cells and Immunity Analytics, Subdivision of Biomedical Laboratory Sciences, Division of Health Science, Tokushima University Graduate School of Biomedical Sciences, Kuramoto-cho 3-18-15, Tokushima City, Tokushima 770-8509, Japan.  PBPC(s)  peripheral blood progenitor cell(s)  PASA  PCR amplification of specific alleles  LOH  loss of heterozygosity  ABO blood-group system  DNA sequencing  Cultured cell
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