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Kinetics of methotrexate binding to dihydrofolate reductase from Neisseria gonorrhoeae
Authors:D P Baccanari  R L Tansik
Affiliation:The Wellcome Research Laboratories, Research Triangle Park, NC 27709, U.S.A.
Abstract:The kinetics of methotrexate inhibition of dihydrofolate reductase from Neisseria gonorrhoeae have been investigated. Methotrexate was shown to be a tight-binding inhibitor (Kt = 13 pM) competitive with dihydrofolate. However, "stoichiometric" or "pseudoirreversible" inhibition could not be demonstrated. Progress curves of inhibited assays quickly attained steady state regardless of the order of substrate addition, indicating that methotrexate association and dissociation processes were rapid. Kinetic techniques were used to measure the rate of methotrexate dissociation from the enzyme-NADPH-methotrexate ternary complex. At 30 degrees, the first-order off-rate constant (koff) was calculated to be 0.56 min-1. This value is approximately 40-fold greater than the dissociation rate constant of methotrexate for Escherichia coli dihydrofolate reductase. At lower temperatures, progress curves of methotrexate-inhibited gonococcal enzyme assays displayed marked increases in both curvature and the time to reach steady state. At 9 degrees, the methotrexate dissociation rate was slow enough (koff = 0.04 min-1) so that initial velocities of the reaction could be measured, and under these conditions methotrexate inhibition was shown to be "stoichiometric".
Keywords:total inhibitor (free + bound)  total enzyme (free + bound)  free enzyme  free substrate  free inhibitor  product  first- or second-order rate constants where odd numbers denote forward rates and even numbers reverse rates  the second-order association rate constant for binding to the ternary complex  the first-order methotrexate dissociation rate constant for the ternary complex  the methotrexate dissociation constant of the ternary complex  Michaelis constant  reaction velocity in the absence of inhibitor  reaction velocity in the presence of inhibitor  halftime  relative mobility
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