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Formulating causal questions and principled statistical answers
Authors:Els Goetghebeur  Saskia le Cessie  Bianca De Stavola  Erica EM Moodie  Ingeborg Waernbaum  “on behalf of” the topic group Causal Inference (TG7) of the STRATOS initiative
Affiliation:1. Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium;2. Department of Clinical Epidemiology/Biomedical Data Sciences, Leiden University Medical Center, Leiden, The Netherlands;3. Great Ormond Street Institute of Child Health, University College London, London, UK;4. Division of Biostatistics, McGill University, Montreal, Quebec, Canada;5. Department of Statistics, Uppsala University, Uppsala, Sweden
Abstract:Although review papers on causal inference methods are now available, there is a lack of introductory overviews on what they can render and on the guiding criteria for choosing one particular method. This tutorial gives an overview in situations where an exposure of interest is set at a chosen baseline (“point exposure”) and the target outcome arises at a later time point. We first phrase relevant causal questions and make a case for being specific about the possible exposure levels involved and the populations for which the question is relevant. Using the potential outcomes framework, we describe principled definitions of causal effects and of estimation approaches classified according to whether they invoke the no unmeasured confounding assumption (including outcome regression and propensity score-based methods) or an instrumental variable with added assumptions. We mainly focus on continuous outcomes and causal average treatment effects. We discuss interpretation, challenges, and potential pitfalls and illustrate application using a “simulation learner,” that mimics the effect of various breastfeeding interventions on a child's later development. This involves a typical simulation component with generated exposure, covariate, and outcome data inspired by a randomized intervention study. The simulation learner further generates various (linked) exposure types with a set of possible values per observation unit, from which observed as well as potential outcome data are generated. It thus provides true values of several causal effects. R code for data generation and analysis is available on www.ofcaus.org , where SAS and Stata code for analysis is also provided.
Keywords:causation  instrumental variable  inverse probability weighting  matching  potential outcomes  propensity score
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