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基于网络药理学和分子对接探讨龟鹿二仙胶治疗少、弱精子症作用机制
引用本文:丁劲,何清湖,周兴,盛文,李玲,陆包伟,李其信.基于网络药理学和分子对接探讨龟鹿二仙胶治疗少、弱精子症作用机制[J].世界科学技术-中医药现代化,2021,23(12):135-149.
作者姓名:丁劲  何清湖  周兴  盛文  李玲  陆包伟  李其信
作者单位:湖南中医药大学中西医结合学院 长沙 410208;广州中医药大学第七临床医学院附属宝安中医院 深圳 518133,湖南中医药大学中西医结合学院 长沙 410208;湖南医药学院 怀化 418000,湖南中医药大学中西医结合学院 长沙 410208;湖南中医药大学第一附属医院 长沙 410021,湖南中医药大学中西医结合学院 长沙 410208,湖南中医药大学中西医结合学院 长沙 410208,湖南中医药大学中西医结合学院 长沙 410208,广州中医药大学第七临床医学院附属宝安中医院 深圳 518133
基金项目:国家自然科学基金委员会面上项目(81774324):基于“阴平阳秘”理论从Pink1/Parkin通路探讨UU感染性不育症的线粒体自噬失衡机制及知柏地黄丸的干预作用,负责人:何清湖;湖南中医药大学中西医结合一流学科开放基金项目(2020ZXYJH29):基于“阴平阳秘”理论探讨龟鹿二仙胶调控p62自噬介导Keap1-Nrf2/HO1通路活化治疗少、弱精子症的分子机制,负责人:丁劲;湖南中医药大学校级科研基金项目(2018XJJJ02):基于“肾藏精”在少弱精症的作用探讨龟鹿二仙胶“气助阳生阴长”的理论研究,负责人:李玲。
摘    要:目的 基于网络药理学和分子对接探讨龟鹿二仙胶治疗少、弱精子症(AS)的物质基础及作用机制。方法 运用TCMSP数据库筛选龟鹿二仙胶中枸杞子、人参的活性成分及靶标,检索文献及BATMAN-TCM、DrugBank、ETCM、化学专业数据库获取鹿角胶、龟板胶活性成分及靶标;运用GeneCards、OMIM、DrugBank、TTD、DisGeNET数据库筛选AS靶标;运用R语言软件映射得到龟鹿二仙胶治疗AS靶标,运用Cytoscape平台构建龟鹿二仙胶-药物活性成分-靶标及龟鹿二仙胶-药物活性成分-靶标-AS间的互作网络图;运用STRING平台构建治疗靶标间互作网络图;运用ClueGo插件对治疗靶标行GO生物功能分析,R语言软件行KEGG通路富集分析;并运用ZINC、RCSB PDB数据库,AutoDock、PyMOL软件对药物有效活性成分与关键靶标作分子对接。结果 从龟鹿二仙胶中共获得83个有效活性成分,得到53个龟鹿二仙胶治疗AS的潜在靶标,这些靶标主要涉及氧化应激、脂质沉积负调节等生物学过程,并主要富集在PI3K/Akt,HIF-1等信号通路上;分子对接验证显示对接得分 < -5 kcal·mol-1占82.5%,即大部分靶标与成分的结合活性较好。结论 通过网络药理学及分子对接证实了龟鹿二仙胶多成分、多靶标、多途径的作用特点,预测了龟鹿二仙胶可能通过PI3K/Akt,HIF-1等途径,从而调控氧化应激、脂质代谢等生物学过程治疗AS的可能作用机制,为进一步研究其活性成分和作用机制提供理论依据。

关 键 词:网络药理学  分子对接    弱精子症  龟鹿二仙胶
收稿时间:2021/4/19 0:00:00
修稿时间:2022/2/8 0:00:00

Mechanism of Guilu-Erxian-Glue in Treating Oligozoospermia and Asthenospermia (AS) Based on Network Pharmacology and Molecular Docking
Ding Jin,He Qinghu,Zhou Xing,Sheng Wen,Li Ling,Lu Baowei and Li Qixin.Mechanism of Guilu-Erxian-Glue in Treating Oligozoospermia and Asthenospermia (AS) Based on Network Pharmacology and Molecular Docking[J].World Science and Technology-Modernization of Traditional Chinese Medicine,2021,23(12):135-149.
Authors:Ding Jin  He Qinghu  Zhou Xing  Sheng Wen  Li Ling  Lu Baowei and Li Qixin
Institution:College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China;Affiliated Bao''an Hospital of Traditional Chinese Medicine, The Seventh Clinical Medical College, Guangzhou University of Traditional Chinese Medicine, Shenzhen 518133, China,College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China;Hunan University of Medicine, Huaihua 418000, China,College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China;The First Hospital of Hunan University of Chinese Medicine, Changsha 410011, China,College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China,College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China,College of Integrated Traditional Chinese and Western Medicine, Hunan University of Chinese medicine, Changsha 410208, China,Affiliated Bao''an Hospital of Traditional Chinese Medicine, The Seventh Clinical Medical College, Guangzhou University of Traditional Chinese Medicine, Shenzhen 518133, China
Abstract:Objective To explore the material basis and mechanism of Guilu-Erxian-Glue (GLEXG) in treating oligozoospermia and asthenospermia (AS) based on network pharmacology and molecular docking.Methods TCMSP database was used to screen the active components and targets of Fructus Lycii and Radix Ginseng, and the literatures, BATMAN-TCM, DrugBank, ETCM and Chemical Professional database were used to screen the components and targets of Antler Gum and Tortoise Shell Gum; GeneCards, OMIM, DrugBank, TTD, DisGeNET database were used to screen AS targets. The therapeutic target of GLEXG was mapped by R language, and Cytoscape platform was used to construct the interaction network of GLEXG-component-target and GLEXG-component-AS-target. The interaction network diagram of therapeutic target was constructed by STRING; the function of GO biology was analyzed by ClueGo platform; KEGG pathway was enriched by R language; ZINC and RCSB PDB database, AutoDock and PyMOL software were used for molecular docking between potential components and key targets.Results 83 active components and 53 potential targets of GLEXG were obtained in treating AS. These targets were mainly involved in biological processes such as oxidative stress and negative regulation of lipid storage, and mainly concentrated in PI3K/Akt, HIF-1 signal pathways; Molecular docking verification showed that the docking score was < -5 kcal·mol-1 accounted for 82.5%, which means that most of the targets had high docking activity with the components.Conclusion The characteristics of multi-component, multi-target and multi-pathway of GLEXG were confirmed by network pharmacology and molecular docking, and the potential mechanism of GLEXG in treating AS is predicted via PI3K/Akt, HIF-1 pathway to regulate oxidation stress and lipid metabolism, which can provide theoretical basis for further study of its components and mechanism.
Keywords:Network pharmacology  Molecular docking  Oligospermia and asthenospermia  Guilu-Erxian-Glue
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