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Advances in three-dimensional reconstruction of the experimental spinal cord injury
Authors:B S  C L  V  D  K N  R B  
Institution:

a Department of Basic Medical Sciences, School of Veterinary Medicine, Center for Paralysis Research, Purdue University, 1244 VCPR West Lafayette, IN 47907-1244, USA

b Department of Computer Sciences, Center for Computational Visualization, The University of Texas at Austin, Austin, TX, USA

c Lawrence Livermore National Laboratory Livermore, CA, USA

d Computational Engineering International, Morrisville, NC, USA

e Foundry Networks, Inc. San Jose, CA, USA

Abstract:Three-dimensional (3D) computer reconstruction is an ideal tool for evaluating the centralized pathology of mammalian spinal cord injury (SCI) where multiple anatomical features are embedded within each other. Here, we evaluate three different reconstruction algorithms to three-dimensionally visualize SCIs. We also show for the first time, that determination of the volume and surface area of pathological features is possible using the reconstructed 3D images themselves. We compare these measurements to those calculated by older morphometric approaches. Finally, we demonstrate dynamic navigation into a 3D spinal cord reconstruction.
Keywords:Three-dimensional reconstruction  3D Computer visualization  3D Morphometry  Spinal cord injury  Neurotrauma  Serial light microscopy  Registration
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