Epitope mapping of human factor IX inhibitor antibodies

Summary. We have determined the location of epitopes on the factor IX for three haemophilia B inhibitor antibodies (HB-1, HB-3, HB-7) and a monoclonal anti-factor IX inhibitory antibody (designated 65–10). The main binding region of HB-1, HB-3 and HB-7 was ¹⁵⁵YVNSTEAETI¹⁶⁴ (residues 155–164), ¹⁶⁷NITQSTQSFN¹⁷⁶ and ¹⁵⁶VNSTEAETI¹⁶⁴, respectively. The binding region of 65–10 was ¹⁶⁸ITQSTQSFNDFTRVV¹⁸², which included the cleavage site (¹⁸⁰R-V¹⁸¹) for activation by factor XIa. By neutralization experiments using two peptides, ¹⁵⁶VNSTEAETI¹⁶⁴ and ¹⁶⁷NITQSTQSFN¹⁷⁶, the degree of neutralization of anti-factor IX IgG purified by protein A was determined. Neutralization of three antibodies, HB-1, HB-3 and HB-7, in the presence of 10m m of the peptides ¹⁵⁶VNSTEAETI¹⁶⁴ was 30.1%, 0% and 10.8%, respectively, and in the presence of 4 m m of ¹⁶⁷NITQSTQSFN¹⁷⁶ it was 0%, 13.5% and 17.3%, respectively. On the other hand, when plasmas of patients instead of purified IgG were used for neutralization, 10 m m of ¹⁵⁶VNSTEAETI¹⁶⁴ and 4 m m of ¹⁶⁷NITQSTQSFN¹⁷⁶ failed to neutralize the inhibitor in the plasmas.