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Genetic characterization of hantaviruses transmitted by the Korean field mouse (Apodemus peninsulae), Far East Russia
Authors:Lokugamage Kumari  Kariwa Hiroaki  Hayasaka Daisuke  Cui Bai Zhong  Iwasaki Takuya  Lokugamage Nandadeva  Ivanov Leonid I  Volkov Vladimir I  Demenev Vladimir A  Slonova Raisa  Kompanets Galina  Kushnaryova Tatyana  Kurata Takeshi  Maeda Kenji  Araki Koichi  Mizutani Tetsuya  Yoshimatsu Kumiko  Arikawa Jiro  Takashima Ikuo
Affiliation:Hokkaido University, Sapporo, Japan.
Abstract:In an epizootiologic survey of 122 rodents captured in Vladivostok, Russia, antibodies positive for hantavirus were found in Apodemus peninsulae (4/70), A. agrarius (1/39), and Clethrionomys rufocanus (1/8). The hantavirus sequences identified in two seropositive A. peninsulae and two patients with hemorrhagic fever with renal syndrome (HFRS) from the Primorye region of Far East Russia were designated as Solovey and Primorye, respectively. The nucleotide sequences of the Solovey, Primorye, and Amur (obtained through GenBank) sequences were closely related (>92% identity). Solovey and Primorye sequences shared 84% nucleotide identity with the prototype Hantaan 76-118. Phylogenetic analysis also indicated a close relationship between Solovey, Primorye, Amur, and other viruses identified in Russia, China, and Korea. Our findings suggest that the Korean field mouse (A. peninsulae) is the reservoir for a hantavirus that causes HFRS over a vast area of east Asia, including Far East Russia.
Keywords:Hantavirus   Apodemus peninsulae   hemorrhagic fever with renal syndrome   HFRS   Far East Russia
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