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超多面体模型用于Na/H交换抑制剂胍类化合物的分子筛选
引用本文:Bao XH,Lu WC,Liu L,Chen NY. 超多面体模型用于Na/H交换抑制剂胍类化合物的分子筛选[J]. Acta pharmacologica Sinica, 2003, 24(5): 472-476,480
作者姓名:Bao XH  Lu WC  Liu L  Chen NY
作者单位:[1]不详 [2]上海大学理学院化学系,中国上海200436
基金项目:Project supported by Ford-China Foundation, № 9716214.
摘    要:目的:研究N-(3—氧—3,4—二氢—2H-苯并[1,4]噁嗪—6—碳基)胍类化合物的量子化学结构参数与Na/H交换抑制活性的关系,探讨计算机辅助识别该类化合物生物活性的手段.方法:用我们独创的超多面体模型.结果:用超多面体模型总结出该类化合物(样本)在多维空间中的分布区域,建立了该类化合物的构效关系.并用“留一法”比较了PCA、Fisher方法与超多面体模型的预报能力.结论:对同一套数据的胍类化合物分子,用超多面体模型作分子筛选的准确率比用PCA和Fisher方法高.因此,超多面体模型可望成为筛选新高活性化合物的一个有力工具.

关 键 词:胍类 钠/氢交换抑制剂 超多面体模型 分子筛选

Hyper-polyhedron model applied to molecular screening of guanidines as Na/H exchange inhibitors
Bao Xin-Hua,Lu Wen-Cong,Liu Liang,Chen Nian-Yi. Hyper-polyhedron model applied to molecular screening of guanidines as Na/H exchange inhibitors[J]. Acta pharmacologica Sinica, 2003, 24(5): 472-476,480
Authors:Bao Xin-Hua  Lu Wen-Cong  Liu Liang  Chen Nian-Yi
Affiliation:Department of Chemistry, School of Sciences, Shanghai University, Shanghai 200436, China. ly046474@online.sh.cn
Abstract:AIM: To investigate structure-activity relationships of N-(3-Oxo-3,4-dihydro-2H-benzo[1,4]oxazine-6-carbonyl) guanidines in Na/H exchange inhibitory activities and probe into a new method of the computer-aided molecular screening. METHODS: The hyper-polyhedron model(HPM) was proposed in our lab. RESULTS: The samples with probably higher activities could be determined in such a way that their representing points should be in the hyper-polyhedron region where all known samples with high activities were distributed. And the predictive ability of different methods available was tested by the cross-validation experiment. CONCLUTION: The accurate rate of molecular screening of N-(3-Oxo-3,4-dihydro-2H-benzo[1,4]oxazine-6-carbonyl) guanidines by HPM was much higher than that obtained by PCA (principal component analysis) and Fisher methods for the data set available here. Therefore, HPM could be used as a powerful tool for screening new compounds with probably higher activities.
Keywords:guanidines  structure-activity relationship  sodium-hydrogen antiporter  pattern recognition  hyperpolyhedron models
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