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Microscopy visualisation confirms multi‐species biofilms are ubiquitous in diabetic foot ulcers
Authors:Khalid Johani  Matthew Malone  Slade Jensen  Iain Gosbell  Hugh Dickson  Honhua Hu  Karen Vickery
Affiliation:1. Surgical Infection Research Group, Faculty of Medicine and Health Sciences, Macquarie University, Sydney, NSW, Australia;2. Central Military Laboratories and Blood Bank, Prince Sultan Military Medical City, Riyadh, Saudi Arabia;3. Infectious Diseases and Microbiology, School of Medicine, Western Sydney University, Sydney, NSW, Australia;4. Liverpool Diabetes Collaborative Research Unit, Ingham Institute of Applied Medical Research, Sydney, NSW, Australia;5. High Risk Foot Service, Liverpool Hospital, South West Sydney LHD, Sydney, NSW, Australia;6. Antimicrobial Resistance and Mobile Elements Group, Ingham Institute of Applied Medical Research, Sydney, NSW, Australia;7. South Western Sydney Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia;8. Ambulatory Care Department (PIXI), Liverpool Hospital, South West Sydney LHD, Sydney, NSW, Australia
Abstract:Increasing evidence within the literature has identified the presence of biofilms in chronic wounds and proposed that they contribute to delayed wound healing. This research aimed to investigate the presence of biofilm in diabetic foot ulcers (DFUs) using microscopy and molecular approaches and define if these are predominantly mono‐ or multi‐species. Secondary objectives were to correlate wound observations against microscopy results in ascertaining if clinical cues are useful in detecting wound biofilm. DFU tissue specimens were obtained from 65 subjects. Scanning electron microscopy (SEM) and peptide nucleic acid fluorescent in situ hybridisation (PNA‐FISH) techniques with confocal laser scanning microscopy (CLSM) were used to visualise biofilm structures. Next‐generation DNA sequencing was performed to explore the microbial diversity. Clinical cues that included the presence of slough, excessive exudate, a gel material on the wound bed that reforms quickly following debridement, poor granulation and pyocyanin were correlated to microscopy results. Of the 65 DFU specimens evaluated by microscopy, all were characterised as containing biofilm (100%, P < 0·001). The presence of both mono‐species and multi‐species biofilms within the same tissue sections were detected, even when DNA sequencing analysis of DFU specimens revealed diverse polymicrobial communities. No clinical correlations were identified to aid clinicians in identifying wound biofilm. Microscopy visualisation, when combined with molecular approaches, confirms biofilms are ubiquitous in DFUs and form either mono‐ or multi‐species biofilms. Clinical cues to aid clinicians in detecting wound biofilm are not accurate for use in DFUs. A paradigm shift of managing DFUs needs to consider anti‐biofilm strategies.
Keywords:Biofilms  Diabetic foot ulcers  Fluorescent in situ hybridisation  Microscopy  Scanning electron microscopy
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