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Scanning method of identify the molecular heterogeneity of δ-globin gene especially in δ-thalassemias: Detection of three novel substitutions in the promoter region of the gene
Authors:Manoussos Papadakis  Elisavet Papapanagiotou  Afrodite Loutradi-Anagnostou
Abstract:A scanning strategy for the detection of δ-globin gene mutations and polymorphisms is presented. This procedure is based on the denaturing gradient gel electrophoresis (DGGE) of four different artificially amplified DNA fragments which cover the promoter, the exons, as well as IVS I of the reported gene. To estimate the efficiency and sensitivity of the proposed procedure, we analysed the appropriate controls of δ-thalassemic carriers, uncharacterised δ-thalassemias and cases with normal hematological phenotype, but slightly increased (up to 3.5%) HbA2. DGGE results permitted the identification of δ-globin gene mutations and the polymorphism - 199 (T→C). Three novel base substitutions inside the promoter region of the gene [−65(A→G), −55(T→C), −36(C→A)], were also revealed. These changes are either linked in cis with other mutations or are responsible for thalassemias or for positive regulatory effect in δ-globin gene expression. The proposed experimental strategy consists of an accurate, rapid, safe and inexpensive screening procedure for establishing the molecular basis of δ-globin gene defects, suitable for the application for both research and diagnostics. Hum Mutat 9:465–472, 1997 © 1997 Wiley-Liss, Inc.
Keywords:δ  -globin gene  DGGE  δ  -globin mutations  promoter mutations
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