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DNA 条形码技术在黑瞎子岛鼠类鉴定中的应用
引用本文:刘润吉,张荣波,李明,刘丽娟,呼满霞,王静,曹晓梅,郭天宇,张晓龙.DNA 条形码技术在黑瞎子岛鼠类鉴定中的应用[J].寄生虫与医学昆虫学报,2014,0(1):48-53.
作者姓名:刘润吉  张荣波  李明  刘丽娟  呼满霞  王静  曹晓梅  郭天宇  张晓龙
作者单位:刘润吉(安徽理工大学,安徽淮南232000 中国检验检疫科学研究院,北京100123);张荣波(安徽理工大学,安徽淮南,232000); 李明 (黑龙江出入境检验检疫局,哈尔滨,150001); 刘丽娟 (中国检验检疫科学研究院,北京,100123); 呼满霞 (黑龙江出入境检验检疫局,哈尔滨,150001); 王静 (中国检验检疫科学研究院,北京,100123); 曹晓梅 (中国检验检疫科学研究院,北京,100123); 郭天宇 (中国检验检疫科学研究院,北京,100123); 张晓龙 (中国检验检疫科学研究院,北京,100123);
基金项目:国家科技支撑计划项目(2012BAK11B05);国家质检总局科技计划项目(项目编号:IK149)
摘    要:为了探索基于COⅠ基因的DNA条形码技术在鼠类鉴定中的应用,本研究检测了黑瞎子岛地区2科3属4种41只鼠类的COⅠ基因序列,进行比对分析,基于Kimura双参数模型计算种内种间遗传距离,用NJ法构建系统发育树,结果表明种间遗传距离显著大于种内遗传距离,聚类分析表现为很短的种内分支和较长的种间分支,同种个体聚为高支持度的单一分支。5只红背Clethrionomys rutilus 被误判为棕背 Clethrionomys rufocanus,24只莫氏田鼠Microtus maximowiczii被误判为东方田鼠Microtus fortis,1只大林姬鼠Apodemus peninsulae被误判为东方田鼠。研究结果表明, DNA条形码不仅能够纠正形态学鉴定中的错误,还能鉴别形态相近的近缘种。基于COⅠ基因的DNA条形码技术能够方便、快捷、准确的鉴定鼠类。

关 键 词:COⅠ基因  DNA条形码  黑瞎子岛  鼠种

DNA BARCODING IN SURVEYS OF RATS FROM HEIXIAZI ISLAND,SINO-RUSSIAN BORDER
LIU Run-Ji,ZHANG Rong-Bo,LI Ming,LIU Li-Juan,HU Man-Xia,WANG Jing,CAO Xiao-Mei,GUO Tian-Yu,ZHANG Xiao-Long.DNA BARCODING IN SURVEYS OF RATS FROM HEIXIAZI ISLAND,SINO-RUSSIAN BORDER[J].Acta Parasitologica et Medica Entomologica Sinica,2014,0(1):48-53.
Authors:LIU Run-Ji  ZHANG Rong-Bo  LI Ming  LIU Li-Juan  HU Man-Xia  WANG Jing  CAO Xiao-Mei  GUO Tian-Yu  ZHANG Xiao-Long
Institution:1. Anhui University of Science and Technology, Huainan 232000, China; 2. Chinese Academy of Inspection and Quarantine, Beijing 100123, China; Heilongjiang Entry-Exit Inspection and Quarantine Bureau, Harbin 150001, China)
Abstract:To explore the application of DNA barcoding in the identification of rats, the mitochondrial cytochrome c oxidase subunit I genes of 41 rats from Heixiazi Island, belonging to 2 families, 3 generas and 4 species, were amplified.Blast comparisons were made in NCBI.The Intraspecific genetic distance and interspecific genetic distance were calculated with MEGA 5.0 based on Kimura double parameter model.The NJ tree was ultimately carried out.The results indicated that the interspecific genetic distance was remarkably greater than the intraspecific genetic distance .The phylogenetic analysis suggested that the lengths of interspecific branches were much longer than those of intraspecific branches.The rat samples of the same species constituted monophyletic groups .5 Clethrionomys rutilus rats were based on morphologic characters as Clethrionomys rufocanus.24 Microtus maximowiczii rats were based on morphologic characters as Microtus fortis.One Apodemus peninsulae rat was misidentified as Microtus fortis.Our research indicated that DNA barcode can not only identify correctly without morphological diagnoses, but also identify allied species.DNA barcoding based on COⅠgene can provide convenient and accurate identification of rats.
Keywords:COⅠ gene  DNA Barcoding  Heixiazi Island  Rat
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