MICA1078: A novel allele identified in a Moroccan individual affected by celiac disease

A novel MICA allele, MICA¹078, has been identified during HLA/MICA high resolution typing of Moroccan patients with celiac disease. MICA¹078 shows an uncommon variation at a highly conserved nucleotide position (nt 493, G → A), resulting in one amino acid change at codon 142 (V → I) of MICA gene (compared to MICA¹002:01), located in the α2-domain, in which V142 is the common residue.     

汉族人群组织激肽释放酶基因调控序列多态性分析

目的　分析组织激肽释放酶基因 5’端启动子区域多态性在四川地区汉族人群中的分布。方法　应同PCR技术结合等位基因特异寡核苷酸片段分析的方法 (ASO)对 13 2例四川地区健康汉族人的组织激肽释放酶基因用十种探针进行检测 ,分析等位基因频率的分布。结果　组织激肽释放酶基因的A、B、C、D、E、H、K、P的频率分别为 2 2 .7%、9.8%、9.8%、3 .0 %、9.1%、2 3 .1%、16.3 %、6.1%。结论　在我国四川地区的健康汉族人群中 ,该位点确实存在多态性。     

2型糖尿病患者载脂蛋白E基因多态性的研究

目的：探讨中国人2型糖尿病患者载脂蛋白E（apoE)基因多态性及其与血脂和载脂蛋白水平的关系。方法：采用聚合酶链反应－限制性酶切片段长度多态性法，分别对74例2型糖尿病患者及191例血脂、血糖正常且无糖尿病史者的apoE基因型、空腹血脂及载脂蛋白AI、AⅡ、B100、CⅡ、CⅢ及E进行全面分析。结果：2型糖尿病患者的血清甘油三酯（TG）、总胆固醇（TC），低密度脂蛋白胆固醇（LDLC），非高密度脂蛋白胆固醇（nHDLC),载脂蛋白B100、CⅡ、CⅢ、E水平及TG／HDLC比值较对照组显著升高（P＜0．01）；血清高密度脂蛋白胆固醇（HDLC），apoE/apoCⅢ比值显著降低（P＜0．05）。2型糖尿病组与对照组apoE基因频率分布无显著性差异（P＞0．05）。携带ε2等位基因组血清TG／HDLC比值较E3／3基因型显著降低；而携带ε4等位基因组血清apoAⅡ水平较E3／3基因型及携带ε2等位基因组显著升高（P＜0．001）。结论：2型糖尿病患者apoE基因多态性与血TG／HDLC及apoAⅡ有一定关联。     

Amplified fragment length polymorphism analysis of the VNTR locus D1S80 in central Spain

Summary The polymorphism of the D1S80 locus has been analyzed in a population sample of 203 unrelated individuals living in Madrid (central Spain) by PCR and subsequent semi-dry discontinuous polyacrylamide gel electrophoresis (Tris-chloride/Tris-glycine buffer system) followed by silver staining, The electrophoretic system described in this study offers high resolution in the separation of the different D1S80 alleles allowing the detection of microvariability around the allele T22 in the spanish population. Twenty different alleles containing 17–40 repeats of the basic 16bp unit were distinguished. The alleles T18 and T24 were found to be relatively common in Spain, as in other populations:, with frequencies of 0.224 and 0.372, respectively. No evidence of significant deviations from Hardy-Weinberg equilibrium was found in these preliminary population data.     

中国汉族人群APOE等位基因频率的初步研究

载脂蛋白Ｅ（ａｐｏｌｉｐｏｐｒｏｔｅｉｎＥ，ＡＰＯＥ）基因是一个多功能基因，除调节脂类及脂蛋白代谢之外，近年来还发现它与Ａｌｚｈｅｉｍｅｒ病及Ⅲ型高血脂症等病之间有密切关系。为对上述疾病进行病因学研究，作者采用一步法ＰＣＲ技术对４３８名无亲缘关系的中国汉族健康受试者的ＡＰＯＥ基因进行分型，并计算其基因频率分布，结果表明，中国治疗人群ＡＰＯＥ３种等位基因的频率分别为：Ｅ２＝０．０４００，Ｅ３＝０．８     

样本量对等位基因检出数量的影响

以中国37个不同民族9个常染色体STR基因座的群体遗传研究数据资料为例，探讨群体遗传学研究中常染色体STR基因座等位基因检出数量与样本量之间的关系，即样本量对等住基因检出数量的影响。结果显示在一定范围之内，样本量的大小与所观测到的不同基因座等位基因检出数量之间存在正相关关系。当超过一定范围时，样本量的继续增加不再明显影响等位基因的检出数量。杂合度较低的位点随样本量的变化波动较大，杂合度较高的位点随样本量的变化波动较小。     

Ethnic variation in the HER-2 codon 655 genetic polymorphism previously associated with breast cancer

HER-2, a protooncogene located on chromosome 17q21, encodes a transmembrane glycoprotein (p185) with tyrosine kinase activity. Alterations of the HER-2 gene have been implicated in the carcinogenesis and prognosis of breast cancer and other solid tumors. It is also a cancer-therapeutic target for antibody-based therapy against the HER-2 protein. A single-nucleotide polymorphism (SNP) at codon 655, resulting in a G-to-A transition (Ile655Val) in the transmembrane domain-coding region of this gene has been associated with an increased risk of breast cancer, particularly among younger women. To understand the importance of this finding throughout the world, we evaluated this polymorphism in Ghanaian, Kenyan, Sudanese, Caucasian, African–American, Saudi, and Filipino subjects using a polymerase chain reaction-restriction fragment length polymorphism assay. The frequency of the Val allele, which is associated with increased breast cancer risk, was highly variable between populations (0%–24%). Continental African populations had a lower frequency of the Val allele than did Saudi, Chinese, Filipino, Caucasian, and African–American subjects. The data suggest that this SNP has variable frequency in different ethnic groups. The findings in this study correspond with the lower incidence and lower risk of breast cancer in African women compared with Caucasian and African–American women. Received: December 13, 2001 / Accepted: January 16, 2002     

乌鲁木齐市老年人群ApoE基因与脑梗死、心肌梗死关联性研究

目的研究乌鲁木齐市老年人群载脂蛋白E(ApoE)基因与脑梗死(CI)和心肌梗死(MI)之间的相关性.方法应用聚合酶链式反应扩增技术及限制性片段长度多态性技术对56例脑梗死患者、60例心肌梗死患者及104例对照者的ApoE基因进行分型,分别计算各组ApoE等位基因、基因型的频率.结果脑梗死组和心肌梗死组ε3/ε4、ε4/ε4基因型频率明显高于对照组(P＜0.05),ε2/ε2基因型频率明显低于对照组(P＜0.05);脑梗死组的ApoEε4等位基因频率明显高于对照组(P＜0.05);ApoE基因多态与心肌梗死间未发现关联.结论 ApoEε4等位基因可能是脑梗死潜在的危险因子,ε2等位基因对脑梗死的发生可能具有一定保护作用.     

HLA-DRB1等位基因在皖籍类风湿关节炎患者的分布

目的探讨HLA-DRB1基因在皖籍类风湿关节炎患者的分布。以寻找皖籍类风湿关节炎患者的易感性和保护性HLA-DRB1等位基因及这些等位基因的意义。方法采集类风湿关节炎患者（106例）和正常对照（340例）外周静脉血，采用SSP多重PCR技术扩增两组成员HLA-DRB1等位基因。计算并比较两组等位基因携带率。结果HLA-DRB1＊04、DRB1＊09和DRB1＊1001在RA组的频率显著高于正常对照组，两组差异有显著性（P〈0．01）；而HLA-DRB1＊11、DRB1＊15和DRB1＊07的频率显著低于对照组，两组差异有显著性（P〈0．01）；其余等位基因在两组分布差异无显著性（P〉0．05）。结论HLA-DRB1＊04、DRB1＊09和DRB1＊1001可能是皖籍RA患者的易感性等位基因，HLA—DRB1＊11、DRB1＊15和DRB1＊07可能是保护性等位基因。     

Population genetics of the hypervariable locus D12S391 in Koreans

The hypervariable short tandem repeat (STR) locus D12S391 was investigated in a Korean population and 34 fragments were sequenced to confirm the structure of alleles. From these sequenced fragments an allelic ladder containing 13 sequenced alleles was constructed. From 595 unrelated Koreans, 14 alleles were detected and one variant allele 19.3 was observed. The observed heterozygosity was 0.795 and no deviation from Hardy-Weinberg equilibrium was observed in the Korean population (p = 0.606). The allele frequency distribution in the Korean population was not similar to other racial or ethnic groups except for Egyptians, Yemenis, Japanese and Caucasoids from the Rhine area. No mutations were observed in the 702 meioses from 144 Korean families. This study demonstrates that the STR locus D12S391 is a useful tool for forensic identification and parentage testing. Received: 15 September 1999 / Accepted: 18 December 1999