中国汉族人群遗传性聋基因座位STR位点的遗传多态性研究

目的 研究中国汉族人群10个遗传性聋基因座位的短串连重复序列(STR)的遗传多态性。方法 应用PCR方法对10个位点进行扩增，变性聚丙烯酰胺凝胶电泳分离，记录基因型。采用PPAP软件计算正常人各STR位点等位片段频率、基因型频率、预期基因型频率、多态信息量(PIC)和Hardy-Weinberg平衡吻合性检验。结果 中国汉族人群D6S287、D8S1132、D13S1275、D15S130、D1S2726、D4S3038、D2S2380、D22S282、D14S1042、D7S529各位点分别检出10个、9个、8个、7个、7个、7个、6个、6个、6个及5个等位片段，多态性分布均符合Hardy-Weinberg平衡定律。各位点PIC值分别为0．879、0．854、0．864、0．821、0．686、0．794、0．764、0．732、0．773、0．712；杂合度均高于0．7。结论 中国汉族人群10个位点STR均具有较高的杂合度和多态信息量，是较理想的遗传标记。     

Subjects with <Emphasis Type="Italic">TNF-A-857TT</Emphasis> and <Emphasis Type="Italic">-1031TT</Emphasis> genotypes showed the highest <Emphasis Type="Italic">Helicobacter pylori</Emphasis> seropositive rate compared with those with other genotypes

Background A possible association between Helicobacter pylori seropositivity and tumor necrosis factor (TNF) A G-308A has been reported in Korea. The present study examined the associations of H. pylori with functional polymorphisms, TNF-A G-308A, C-857T, and T-1031C, and TNF-B A252G in Japanese subjects.Methods The total of 1374 study subjects included 241 outpatients who participated in an H. pylori eradication program (HPE), 679 first-visit outpatients (FVO) at a regional cancer hospital, and 454 local residents who received a health checkup examination (HCE).Results The frequency of the TNF-A -308A allele was only 1.3% of 480 chromosomes in the HPE group, so the FVO and HCE groups were not genotyped for that polymorphism. The genotype frequency of TNF-A C-857T was 69.2% CC, 27.7% CT, and 3.1% TT; that of TNF-A T-1031C was 69.4% TT, 28.1% TC, and 2.5% CC; and that of TNF-B A252G was 36.8% AA, 48.2% AG, and 15.0% GG. TNF-A -857T was tightly linked to TNF-A -1031T and TNF-B 252A. No significant associations between H. pylori seropositivity and polymorphisms of TNF-A C-857T and TNF-B A252G were observed. However, a reduced odds ratio adjusted for sex, age, and recruitment source was observed for TNF-A -1031CC (0.43; 95% confidence interval, 0.20–0.91) relative to TNF-A -1031TT. Subjects with TNF-A -857CC and -1031CC showed the lowest seropositivity (38.2% of 34 participants), while those with TNF-A -857TT and -1031TT showed the highest (66.7% of 42 participants).Conclusions This study suggests that the possibly high expression genotype of TNF-A may increase susceptibility to persistent H. pylori infection.     

AP-PCR和set1、set2两基因PCR用于志贺菌基因多态性研究

目的与方法 :　应用随机引物 PCR(简称 AP- PCR或 PAPD)和 set1、set2两基因 PCR方法分析了 71株F2 a志贺菌的基因多态性。　结果 :两种引物的 AP- PCR中 ,引物 12将 71株 F2 a志贺菌分为两种不同的基因型 ,引物 17和 set1、set2两基因 PCR将所有菌株分为四种不同的基因型 ,两种方法结合则可分为七种不同的基因型 ;其中 6 5株 F2 a志贺菌基因型相同 ,其余 6株各为独立的型别。本研究表明 AP- PCR和 set1、set2两基因 PCR为志贺菌基因多态性分析的有效手段 ,二者结合则更为完善 ;研究结果还表明 ,在我国南北不同地区不同时间分离到的无论是暴发株还是散发株 ,均具有相同的优势克隆。　结论 :上述菌株是引起国内菌痢散发和暴发的主要基因型 ,是流行病学研究和防治的重点     

应用DHPLC技术分析错配修复基因(hMLH1)T1151A多态与胃肠道肿瘤的遗传易感性

目的了解中国人hMLH1基因T1151A多态与胃肠道肿瘤的遗传易感性.方法采用病例对照研究设计,提取233例大肠癌(结,直肠癌)患者,273例胃癌患者和268例健康人外周血细胞的基因组DNA.PCR扩增hMLH1基因T1151A多态所在第12外显子的部分DNA片段(217 bp),变性高效液相色谱(DHPLC)检测,DNA测序验证,比较分析T1151A基因型在胃肠道肿瘤的分布.结果正常人群中T1151A多态T/A基因型频率为6.34%,其等位基因A频率为3.28%,在大肠癌患者和胃癌患者中T/A基因型频率与正常人群相比存在显著性差异,分别为11.6%(P=0.039)和12.1%(P=0.021),尤其在＜45岁的大肠癌患者和＜50岁的胃癌患者中,等位基因A频率与正常人群相比差异更为显著,分别为10.66%(P=0.002)和11.27%(P=0.001).结论T1151A作为中国人hMLH1基因上的一个多态位点,可能是中国人大肠癌和胃癌遗传易感因素,可作为中国人胃及大肠肿瘤、尤其是低龄胃及大肠肿瘤高危人群筛选的侯选指标.     

GSTM1和GSTT1基因多态性与COPD易感性的研究

目的　探讨GSTM1、GSTT1基因多态性与COPD易感性的关系。方法　应用PCR技术对 91例COPD患者和 44例非COPD人群GSTM1、GSTT1不同基因型进行检测并根据性别、年龄及吸烟史对其易感性进行分析。结果　两组之间相比较男性及 >40岁的人群其GSTM10 / 0基因型频率有显著性差异 (P <0 0 5 ) ;在吸烟指数为≥ 3 1PY时 ,COPD组的GSTM10 / 0基因型频率显著高于对照组 (P <0 0 5 ) ;根据性别、年龄组及吸烟史分析 ,在两组人群中GSTT10 / 0基因型频率均未发现有显著性差异 (P值均 >0 0 5 ) ;两组人群综合基因型频率分析显示 ,在吸烟指数≥ 3 1PY的人群中GSTM10 / 0 -GSTT10 / 0基因型频率则显著高于对照组 (P<0 0 5 )。结论　GSTM1纯合缺失基因型可能增加了长期大量吸烟人群对COPD的易感性 ,若同时伴有GSTT1的纯合性缺失可进一步增加对COPD的易感性     

妊娠高血压综合征亚甲基四氢叶酸还原酶基因和血管紧张素转换酶基因多态性研究

目的　探讨N5,N10 亚甲基四氢叶酸还原酶 (methyenetetrahydrofolatereductase ,MTH FR)基因和血管紧张素转换酶 (angiotensin convertionenzyme,ACE)基因多态性与妊娠高血压综合征的关系。　方法　应用多聚酶链反应 限制性内切酶片段长度多态性 (PCR RFLP)技术检测 6 2例妊娠高血压综合征 (妊高征组 )患者及 12 0例正常妊娠 (对照组 )的ACE和MTHFR基因多态性。　结果　妊高征组MTHFR基因T/T基因型频率 ( 2 7% )显著高于对照组 ( 15 % ) (P <0 .0 5 ) ,T等位基因频率 ( 5 2 % )也显著高于对照组 ( 39% ) (P <0 .0 1) ,妊高征组ACE基因缺失型纯合子 (DD)频率( 4 0 % )显著高于对照组的 ( 10 % ) (P <0 .0 1) ,缺失型 (D型 )等位基因频率 ( 6 0 % )显著高于对照组的( 2 9% ) (P <0 .0 1)。MTHFR基因T等位基因与ACE基因D等位基因之间存在协同作用。　结论　MTHFR基因和ACE基因多态与妊高征的发病有关 ,ACE基因与MTHFR基因之间可能有协同作用     

Polymorphisms of interleukin (IL)-1α, IL-1β, IL-6, IL-10, and IL-18 and the risk of ovarian cancer

OBJECTIVE: Recent studies of ovarian cancer have suggested a role for inflammation in carcinogenesis. Data from a population-based case-control study in Hawaii were examined to assess the relation between polymorphisms in cytokines involved with the inflammatory response, specifically members of the interleukin (IL) family and the incidence of ovarian cancer. PATIENTS AND METHODS: The analysis of 182 epithelial ovarian cancer cases and 219 controls focused on the polymorphisms in the following genes: IL-1alpha, IL-1beta, IL-6, IL-10, and IL-18. Genotype data were obtained from blood samples collected in participants' homes, and reproductive, demographic, and lifestyle histories were collected during interview. RESULTS: There were no significant odds ratios (ORs) for ovarian cancer by allelic variants in any of the IL genes after adjusting for age, ethnicity, education, oral contraceptive pill use, pregnancy, and history of tubal ligation. Although there was a significantly reduced risk of ovarian cancer risk among women with an IL-1alpha (-4845) T allele compared to women with two G alleles (OR: 0.59; 95% confidence interval: 0.37-0.97) after adjustment for age and ethnicity, the trend was not significant (p = 0.10). Further examination of the data suggested that women with at least one IL-18 variant allele (a G to C transition at position -137) were at significantly decreased risk of advanced ovarian cancer (OR: 0.51; 95% confidence interval: 0.28-0.90) compared to women with the IL-18 GG genotype. There was a significant difference in the risk of ovarian cancer associated with the IL-18 C allele by stage at diagnosis (p = 0.04 for homogeneity in the ORs): cases with IL-18 GC or CC genotypes were less likely to be diagnosed at regional/distant stages. Analysis of the data within ethnic subgroups revealed a significant positive association of the heterozygous IL-18 GC genotype with ovarian cancer risk among Native Hawaiian women (OR: 9.96; 95% CI: 1.88-52.90). The OR for ovarian cancer was not significant for Native Hawaiian women homozygous for the IL-18 C allele, but only one case and control had the IL-18 CC genotype. CONCLUSIONS: Overall, this study does not support an association of selected IL-1alpha, IL-1beta, IL-6, IL-10, or IL-18 polymorphisms with the risk for ovarian cancer. However, the IL-18 G137C variant may be a marker for ovarian cancer progression or metastasis.     

亚甲基四氢叶酸还原酶基因多态性与甘肃汉族2型糖尿病肾病的关系

目的 研究亚甲基四氢叶酸还原酶(MTHFR)基因多态性与汉族2型糖尿病肾病的关系。方法 应用聚合酶链反应—限制性片段长度多态性的方法，检测甘肃汉族人2型糖尿病患者91例，其中单纯糖尿病组50例，糖尿病肾病组41例，正常对照组35例，比较各组间MTHFR等位基因和基因型频率。结果 纯合基因型TT和杂合基因型CT在糖尿病肾病组的频率为34．1％和51．2％，高于糖尿病组(16％和48％)和正常对照组(14.3％和25．7％)，糖尿病肾病组的等位基因T频率(59．8％)也高于糖尿病组(40％)和正常对照组(27．1％)，差异均有统计学意义，糖尿病组和正常对照组之间的分布无统计学差异。结论 MTHFR基因C677T变异与甘肃汉族2型糖尿病患者糖尿病肾病的发病有关，等位基因T可能是糖尿病肾病的易感基因。     

NRAMP1基因INT4和3’UTR位点多态性与肺结核易感性的研究

目的 探讨人类自然抵抗相关巨噬细胞蛋白1（NRAMP1）基因INT4和3＇UTR位点多态性与中国北方汉族成人肺结核发病的关系.方法 采用1：1配对的病例对照研究设计,用聚合酶链反应-限制性片段长度多态性分析方法检测NRAMP1基因中INT4和3＇UTR两个多态性位点,对与肺结核相关的危险因素进行问卷调查,进行单因素和多因素条件logistic回归分析,同时对基因型与肺结核病变的性质和程度进行研究.结果 对124对研究对象进行了INT4和3＇UTR两个多态性位点的基因分型,3＇UTR TGTG＋/del基因型病例组频率显著高于对照组,粗OR值（95%CI）为2.923（1.557～5.487）.病例组和对照组INT4各基因型频率比较差异均无统计学意义.对17个环境危险因素进行了单因素分析,在多因素分析中调整卡痕、体重指数、人均居住面积、家族史4个因素后,3＇UTR TGTG＋/del基因型仍与肺结核显著相关,调整OR值（95%CI）为2.955（1.369～6.381）.在INT4不同基因型中,病例组和对照组肺结核病变性质差异具有统计学意义（x2=9.634,P＜0.05）.结论 NRAMP1基因3＇UTR位点多态性可能是中国北方汉族成人肺结核的易感因素,而INT4多态性可能与肺结核的病变性质有关系.     

干扰素γ基因内含子1+874位点多态性与乙型肝炎病毒感染关系的研究

目的 研究干扰素γ（IFN-γ）基因内含子1＋874位点多态性与乙型肝炎病毒（HBV）感染、转归的关系,探讨慢性HBV感染的遗传易感因素.方法 采用序列特异性引物-聚合酶链反应（PCR-SSP）技术检测231例慢性HBV携带患者、165例自限性HBV感染者和135名正常对照者IFN-γ基因内含子1＋874位点T/A单核苷酸多态性.结果 慢性HBV感染组IFN-γ基因＋874位点AA基因型频率（TT、TA、AA频率分别为9.1%、12.1%、78.8%）高于正常对照组（TT、TA、AA频率分别为12.6%、23.0%、64.4%）（x2=9.60,P=0.008）;而自限性HBV感染组（TT、TA、AA频率分别为13.9%、23.7%、62.4%）和对照组之间差异无显著性（x2=0.16,P=0.92）.结论 IFN-γ基因内含子1＋874位点多态性与慢性HBV感染有关,该位点多态性可能在决定个体HBV感染遗传易感性方面有一定意义.