Effect of Zn doping on phase transition and electronic structures of Heusler-type Pd2Cr-based alloys: from normal to all-d-metal Heusler

Based on first-principles calculations, for Heusler alloys Pd₂CrZ (Z = Al, Ga, In, Tl, Si, Sn, P, As, Sb, Bi, Se, Te, Zn), the effect of Zn doping on their phase transition and electronic structure has been studied in this work. These alloys can be divided into two classes: (i) all-d-metal Heusler Pd₂CrZn and (ii) other normal Heusler alloys Pd₂CrZ (Z = Al, Ga, In, Tl, Si, Sn, P, As, Sb, Bi, Se, Te). For all-d-metal Heusler alloy Pd₂CrZn, transition metal element Zn behaves like a main group element due to its full 3d occupied state, and therefore the Zn atoms tend to occupy Wyckoff sites D (0.75, 0.75, 0.75) instead of replacing Pd atoms at A sites (0, 0, 0). The stable tetragonal L1₀ state is obtained via tetragonal deformation and the L1₀ stable state can be tuned by the uniform strain. The stability of the tetragonal state is analyzed and proved via calculation of the density of states (DOSs) and the phonon spectrum. For the series of normal Heusler alloys Pd₂CrZ, doping with Zn atoms can induce or strengthen the martensitic transformation, or regulate the large c/a ratios to a more reasonable range. It is hoped that this work can provide some guidance for further studies of the relationship between all-d-metal and normal Heusler alloys in the future.

By first-principles calculations, for Heusler alloys Pd₂CrZ (Z = Al, Ga, In, Tl, Si, Sn, P, As, Sb, Bi, Se, Te, Zn), the effect of Zn doping on their phase transition and electronic structure has been studied in this work.     

Correction: Oxidative carboxylation of olefins with CO2: environmentally benign access to five-membered cyclic carbonates

Correction for ‘Oxidative carboxylation of olefins with CO₂: environmentally benign access to five-membered cyclic carbonates’ by Liang Wang et al., RSC Adv., 2020, 10, 9103–9115.

The Royal Society of Chemistry regrets that incorrect details were given for Ref. 10b, 11b and 11c in the original article. The correct versions of Ref. 10b, 11b and 11c are given below as Ref. 1, 2a and 2b, respectively.The Royal Society of Chemistry apologises for these errors and any consequent inconvenience to authors and readers.     

Synthetic progress toward the marine natural product zamamiphidin A

An asymmetric synthetic approach to the octahydrofuro[3,4-b]pyridine framework of marine natural product zamamiphidin A has been described. The key steps include an asymmetric Michael addition of (R)-N-tert-butanesulfinyl imidate with enamidomalonate to install the C10 stereocenter, an intramolecular alkoxide exchange/Michael addition/hydrogenation sequence to construct the bicyclic ring system.

An asymmetric synthetic approach to the octahydrofuro[3,4-b]pyridine framework of marine natural product zamamiphidin A has been described.

Marine natural products have been recognized as an important source of potential lead compounds.¹ Recently, the growing attention on innovative drug discovery has propelled the identification of numerous marine-derived bioactive compounds with superior chemical novelty.² In 2013, Kobayashi and co-workers isolated a new macrocyclic diamine alkaloid zamamiphidin A (1, Fig. 1A) from an Okinawan marine sponge Amphimedon sp. (SS-1231),³ along with its biogenetically related manzamine alkaloids such as ircinic acid (2) and manzamine A (3). In the isolation work, the authors also demonstrated that compound 1 exhibited moderate antibacterial activity against Staphylococcus aureus (MIC, 32 μg mL⁻¹).³ Architecturally, zamamiphidin A was characterized by an unprecedented heptacyclic framework, comprising a highly fused pentacyclic caged core, two 11-membered rings and seven contiguous stereocenters including one all-carbon quaternary center. More specifically, the fusion of 7-oxa-2-azabicyclo[2.2.1]heptane (4, Fig. 1B), azabicyclo[3.3.1]nonane (5) and octahydrofuro[3,4-b]pyridine (6) fragments as well as the presence of quaternary ammonium salt render zamamiphidin A unique among other macrocyclic diamine alkaloids.⁴ To the best of our knowledge, the chemical synthesis of 1 has yet to be disclosed. Herein, we report our recent synthetic efforts toward zamamiphidin A (1).Open in a separate windowFig. 1Structures of (A) zamamiphidin A (1), its related manzamine alkaloids (2 and 3) and (B) fragments 4–6 of 1.From a retrosynthetic perspective (Scheme 1), we envisioned that zamamiphidin A would arise from the advanced intermediate 7 through late-stage formation of two 11-membered rings.^4,5 Central to the synthesis of the target molecule (1) would be the construction of the pentacyclic and cage-like backbone 7. Structural analysis suggested the diazapentacyclic core of 7 could be simplified as a fully substituted tetrahydrofuran moiety containing two amine functionalities at C3 and C10 (Scheme 1, in blue), which thus could be traced back to the precursor 10. Specifically, disconnecting the C1–N2 bond in 7 revealed ketone 8; and the azabicyclo[3.3.1]nonane unit in 8 could be formed by a Mannich reaction and an intramolecular Dieckmann condensation from bicycle 9. Disassembly of the piperidine ring in 9 through an intramolecular Michael addition led back to the functionalized tetrahydrofuran 10. Based on our previous studies,⁶10 could be easily traced back to the chiral malonate 12 bearing a pendant N-tert-butanesulfinyl imidate motif, relying on an intramolecular alkoxide exchange to forge the tetra-hydrofuran ring (11 to 10) and a Davis oxidation to install the C9 hydroxyl group (12 to 11). In turn, 12 could be accessed via a diastereoselective Michael addition of N-tert-butanesulfinyl imidate 13 to enamidomalonate 14.Open in a separate windowScheme 1Retrosynthetic analysis of zamamiphidin A.Our synthetic approach started from the preparation of the chiral malonate 12 (Scheme 2). First, condensation of the known primary amine 15⁷ with dimethyl methoxymethylenemalonate (16) in refluxing toluene delivered enamine 17 (92% yield), which was subsequently protected with Boc to give compound 14. The key asymmetric Michael addition of (R)-N-tert-butanesulfinyl imidate 13 to enamidomalonate 14 proceeded smoothly by employing LiHMDS as base,^6,8–10 providing adduct 12 as the major diastereomer in 72% yield (d.r. = 7 : 1 at C10). We supposed that the addition would preferentially take place through Ts-18 to avoid the significant steric repulsion between the tert-butyl group of 13 and the N-Boc side chain of 14, thus favoring the generation of 12. The configuration of the newly generated C10 stereocenter in 12 could be confirmed later by further transformations (vide infra). As far as we knew, this example represents the first asymmetric conjugate addition of N-tert-butanesulfinyl metalloenamines by using enamidomalonate as the Michael acceptor, which would be useful for the preparation of β-amino acid.¹¹Open in a separate windowScheme 2Synthesis of the chiral malonate 12.With malonate 12 available, we next sought to construct the octahydrofuro[3,4-b]pyridine ring system of zamamiphidin A (Scheme 3). To this end, our first task was to introduce a hydroxyl group at C9 in 12. After exploring various oxidative conditions such as Mn(OAc)₃/AcOH,¹² IBX/DMSO/H₂O,¹³ and O₂/I₂/NaOAc,¹⁴ we found that a Davis protocol¹⁵ (Davis'' oxaziridine/NaH/THF, −50 °C) was successful to convert 12 to 11 with 82% yield. Formation of the tetrahydrofuran ring from 11 proceeded in the presence of Et₃N/toluene at reflux temperature via an intramolecular alkoxide exchange, resulting in 19 (71% yield). Desilylation of 19 with HF afforded the primary alcohol 20 (85% yield). The latter then underwent a two-step synthetic sequence including oxidation of the hydroxyl group to aldehyde and Wittig olefination of the resulting aldehyde with methyl(triphenylphosphoranylidene)acetate (21), providing enoate 10 in 64% overall yield. Upon treating 10 with NaH in the presence of HMPA at −20 °C, an intramolecular Michael addition reaction occurred to enable the coupling of C4 and C4a, leading to the formation of the bicyclic intermediate 22 (72% yield). The structure of 22 was determined through extensive interpretation of the NMR data of its deprotected derivative 23. Unfortunately, we found that the configuration of the newly formed C4a stereocenter was opposite to that in the natural product zamamiphidin A. Inversion of the C4a stereochemistry through generation of the C4–C4a double bond (22 to 24) followed by hydrogenation (24 to 25) was investigated. When compound 22 was treated with LDA and PhSeCl followed by oxidation and spontaneous elimination under the conditions of H₂O₂/pyridine/CHCl₃, the above reaction gave a complex mixture, with only 5–10% yield of the desired product 24 isolated. We attempted to improve this transformation by employing various bases (e.g., LiHMDS, NaHMDS, KHMDS, LiTMP) and different oxidants (e.g., m-CPBA, NaIO₄, AcOOH), which all proved to be unsuccessful. These failures impeded further transformations.Open in a separate windowScheme 3Synthesis of the tricyclic compound 28.On the other hand, we investigated the construction of the oxazolidine ring starting from the bicyclic intermediate 22 (Scheme 3). Thus, reduction of the imine double bond in 22 with borane dimethyl sulfide afforded sulfinamide 26 in 55% yield. Subjecting 26 to the conditions of HCl/MeOH¹⁶ followed by treatment of the resulting primary amine with 2-hydroxypyridine in refluxing toluene¹⁷ furnished an unexpected tricyclic compound 28. The structure of 28 was determined unambiguously through X-ray crystallographic analysis, which again confirmed the C4a stereochemistry generated in the aforementioned intramolecular Michael addition reaction (10 to 22). Formation of the undesired 28 was due to the lactamization occurred at C18 rather than at C1 that was initially envisaged to establish the oxazolidine ring. These results indicated that the correct configuration of C4a might be crucial for the subsequent synthesis.In our revised synthetic approach, a propiolate group was employed to replace the originally used enoate for the Michael addition. We envisioned that hopefully reduction of the double bond generated in the Michael addition of the corresponding propiolate would secure the right configuration at the C4a position. As shown in Scheme 4, the known propargyl alcohol 29 was prepared on a decagram scale from 3-butyl-1-ol over two steps.¹⁸ After acylation of 29 and subsequent deprotection of the TBS group with TBAF, the resulting primary alcohol 30 was converted into phthalimide 31via a Mitsunobu reaction in the presence of phthalimide/PPh₃/DIAD (64% overall yield for three steps). Deacylation of 31 followed by silylation of the resulting primary alcohol with TBSCl/Et₃N/DMAP provided 32 in 36% yield over two steps. Exposure of 32 to hydrazine hydrate in refluxing methanol resulted in removal of the phthalimide group and delivered a free amine, which was directly condensed with 16 to afford the secondary enamine 33 in 80% overall yield. Further protection of the amino group in 33 with Boc produced intermediate 34. Next, compound 34 underwent a similar three-step transformation to that performed on enamidomalonate 14, involving asymmetric 1,4-conjugate addition with imidate 13, Davis oxidation to install the C9 hydroxyl group (35 to 36), and cyclization with Et₃N to assemble the tetrahydrofuran ring, yielding the intermediate 37 smoothly. To reach propiolate 39, the precursor of the key Michael addition for forming C4–C4a bond, further functional group manipulations of 37 were conducted. These included desilyation with HF (37 to 38), Dess–Martin oxidation, Pinnick oxidation, and esterification (38 to 39). Gratifyingly, upon treating 39 with LDA and HPMA in THF at −20 °C, compound 24 was formed with 42% yield through an intramolecular Michael addition and spontaneous migration of the double bond from C4a–C8a to C4–C4a.Open in a separate windowScheme 4Synthesis of compound 24.With compound 24 in hand, selective reduction of the C4–C4a double bond was carried out under catalytic hydrogenation conditions (RANEY® Ni/H₂) and furnished 25 (70% yield) as a single diastereomer with correct C4 and C4a configurations (Scheme 5). Ensuing reduction of the imine group in 25 using borane dimethyl sulfide delivered the tert-butyl sulfonamide 40 with excellent diastereoselectivity (single isomer, 72% yield). The structures of both 25 and 40 were extensively interpreted by NMR spectroscopy. As a consequence, the configurations at C3, C4, C4a and C10 were found to be consistent with the ones in zamamiphidin A.¹⁹ Furthermore, transformations of 25 or 40 into the core of the target zamamiphidin A were investigated. Subjecting 25 to various conditions (NaH, NaOMe, t-BuOK, LDA, LiHMDS, AlCl₃, TiCl₄, etc.) for a Dieckmann condensation failed to construct the C1–C8a bond and give the desired product 41. Instead, ring-opening of the tetrahydrofuran unit in 25 was observed under some circumstances, leading to the byproduct 42via a retro-Michael reaction.Open in a separate windowScheme 5Synthesis of 25 and attempted further transformations.Meanwhile, attempts to synthesize the tricyclic β-keto ester 43 or lactam 44 from compound 40 were also unsuccessful. Most of these experiments suffered from either no reaction or decomposition of the starting materials.In conclusion, we have established a synthetic approach to the octahydrofuro[3,4-b]pyridine core of the complex natural product zamamiphidin A. The synthesis features an intermolecular asymmetric Michael addition (compounds 34 to 35) to form the first chiral center at C10 and a Michael addition/hydrogenation sequence (compounds 39 to 25) to secure the correct configurations at C4 and C4a. The highly functionalized bicyclic intermediate (i.e., 40) prepared in the present work contains four contiguous stereocenters and all the requisite heteroatoms at the right positions. While further transformations of related intermediates to zamamiphidin A were unfruitful, efforts to develop a feasible strategy for total synthesis of the target molecule are ongoing in our laboratory.     

A naphthalimide-based turn-on fluorescence probe for peroxynitrite detection and imaging in living cells

Peroxynitrite (ONOO⁻) is a potent biological oxidant that plays a significant role in diverse physiological and pathological processes. A novel fluorescent probe HCA-OH was developed for specific and sensitive detection of peroxynitrite, and displayed a significant fluorescence turn-on signal. With low cytotoxicity and good photostability, the probe HCA-OH could be applied in imaging ONOO⁻ distribution in HepG2 cells and live C. elegans in real time. Therefore, the probe can be a promising tool for imaging in vivo.

A novel fluorescent probe HCA-OH was designed for selective detection of peroxynitrite and imaging in HepG2 cells and C. elegans.     

In vitro characterization,ADME analysis,and histological and toxicological evaluation of BM1, a macrocyclic amidinourea active against azole-resistant Candida strains

BackgroundCandida species are one of the most common causes of nosocomial bloodstream infections among the opportunistic fungi. Extensive use of antifungal agents, most of which were launched on the market more than 20 years ago, led to the selection of drug-resistant or even multidrug-resistant fungi. We recently described a novel class of antifungal macrocyclic compounds with an amidinourea moiety that is highly active against azole-resistant Candida strains.ObjectiveA compound from this family, BM1, was investigated in terms of in vitro activity against various Candida species, including C. auris isolates, interaction with the ABC transporter, CDR6, and in vivo distribution and safety.MethodsIn vitro assays (CYP inhibition, microsomal stability, permeability, spot assays) were used to collect chemical and biological data; animal models (rat) paired with LC-MS analysis were utilised to evaluate in vivo toxicology, pharmacokinetics, and distribution.ResultsThe current research shows BM1 has a low in vivo toxicity profile, affinity for the renal system in rats, and good absorption, distribution, metabolism, and excretion (ADME). BM1 also has potent activity against azole-resistant fungal strains, including C. auris isolates and CDR6-overexpressing strains.ConclusionsThe results confirmed low minimum inhibitory concentrations (MICs) against several Candida species, including preliminary data vs. C. auris. BM1 has good ADME and biochemical characteristics, is suitable and safe for daily administration and is particularly indicated for renal infections. These data indicate BM1 and its derivatives form a novel, promising antifungal class.     

Alterations in Gut Vitamin and Amino Acid Metabolism are Associated with Symptoms and Neurodevelopment in Children with Autism Spectrum Disorder

Journal of Autism and Developmental Disorders - Metabolic disturbance may be implicated in the pathogenesis of autism. This study aimed to investigate the gut metabolomic profiles of autistic...     

Early-onset spontaneously relieved spasms of infancy in sleep: Electroclinical characteristics and differential diagnoses

PurposeInfantile spasm-like paroxysms are often difficult to classify as epileptic or non-epileptic. We aimed to study spontaneously relieved (non-epileptic) spasms of infancy in sleep. Elucidation of the electroclinical characteristics and differential diagnoses of such spasms could facilitate accurate diagnosis in the future.MethodsWe retrospectively analyzed the clinical data, video-EEG recordings, and other laboratory test results of patients with spontaneously relieved spasms of infancy during sleep. All the enrolled patients were followed up for at least 5 months.ResultsSeven infants were included in this study. The median age at spasm onset was 0.5 months (range: 0.1–2 months). The episodes were characterized by clusters of non-epileptic spasms of the head, trunk, or extremities lasting approximately 0.5–2 s, and were validated by ictal electromyography (EMG)/video EEG. Episodes occurred several times daily in clusters, particularly during sleep; two patients also experienced episodes while awake. Additionally, non-epileptic jerks were recorded in 3 patients. All non-epileptic spasms were completely resolved 2 weeks to 3 months after onset. Moreover, neuropsychomotor development in all patients was normal at the last follow-up (5 to 12 months).ConclusionsSpontaneously relieved spasms of infancy in sleep is a self-limiting movement disorder characterized by onset between 0.1 and 2 months of age, and by clusters of spasms occurring in sleep. Correct differential diagnosis relies on familiar clinical and electrophysiological features.