Rapid identification and susceptibility testing using the VITEK(R) 2 system using culture fluids from positive BacT/ALERT(R) blood cultures

BACKGROUND AND PURPOSE: In order to reduce the turnaround time for laboratory diagnosis of bacteremia, the efficacy of identification and antimicrobial susceptibility testing using samples taken directly from positive BacT/ALERT(R) standard aerobic and standard anaerobic blood culture bottles was evaluated. METHODS: 160 positive blood culture bottles were examined and incubated at 35 degrees C in 5% carbon dioxide for 4-24 h, and an aliquot of the culture fluid was Gram stained. Samples containing Gram-negative bacilli were inoculated on VITEK(R) 2 ID-GNB (identification-Gram-negative bacilli) and AST (antimicrobial susceptibility testing)-GN04 cards, and those containing Gram-positive cocci were inoculated on ID-GPC (identification-Gram-positive cocci) and AST-P526 cards. The same samples were also examined by the standard method, involving subculture from positive BacT/ALERT standard blood culture bottles. RESULTS: Eighty seven of 97 Gram-negative bacilli (89.7%) and 21 of 63 Gram-positive cocci (33.3%) were correctly identified to the species level. For antimicrobial susceptibility testing, the direct method had an overall error rate of 5.4% for Gram-negative bacilli, with 0.9% very major, 0.9% major, and 3.6% minor discrepancies compared to the standard method. The overall error rate in antimicrobial susceptibility testing for the 13 Staphylococcus spp. was 10.3%, with 6.0% very major, 2.6% major, and 1.7% minor discrepancies. CONCLUSION: These data suggest that VITEK 2 cards inoculated with samples taken directly from positive Bact/ALERT blood culture bottles would provide acceptable identification and antimicrobial susceptibility testing results for Gram-negative bacilli, but not for Gram-positive cocci. Compared to the standard method, the direct method would reduce turnaround time by at least 24 h.     

PPARγ在不同周龄apoE-/-小鼠主动脉斑块表达及与斑块成份的相互关系

目的:研究PPARγ基因表达与ApoE-/-小鼠主动脉斑块成份的相互关系。方法:以20和40周龄ApoE-/-小鼠(n=10/组)为研究对象,相同基因背景和周龄C57BL/6 J小鼠设为对照。采用RT-PCR和免疫印迹技术检测各组小鼠主动脉PPARγ基因和蛋白表达变化;Movat 5色套染法和油红O染色检测ApoE-/-小鼠主动脉斑块成份;免疫组织化学技术检测斑块内PPARγ、SM-actin、MOMA-2抗原表达。结合免疫荧光技术分析PPARγ基因在主动脉斑块巨噬细胞、平滑肌细胞的表达及与脂质、弹性纤维、胶原和蛋白聚糖的相互关系。结果:20和40周龄C57BL/6 J小鼠主动脉壁有少量PPARγ表达,以20周龄组明显。ApoE-/-小鼠主动脉壁和斑块内PPARγ表达增多,以斑块内表达明显(P<0.05);与20周龄组比较,40周龄组表达最显著;且斑块脂质含量丰富;弹性纤维、胶原和蛋白聚糖含量减少,血管正性重塑明显;MOMA-2表达增加,SM-actin表达降低(P<0.05)。PPARγ在斑块内巨噬细胞、血管中膜平滑肌细胞和斑块内平滑肌细胞都有表达,但以脂质含量丰富处PPARγ表达最明显。结论:PPARγ在C57BL/6 J小鼠动脉壁表达随增龄而减少;在ApoE-/-小鼠主动脉壁和斑块内PPARγ表达随AS病变进程而增加。推测ApoE-/-小鼠主动脉斑块PPARγ表达上调可能是机体一种代偿行为和自我保护机制。     

儿童呼吸道腺病毒基因分型方法的建立及其应用

目的 利用PCR技术,建立引起儿童呼吸道感染的腺病毒的基因分型方法,便于推广和应用.方法 分析GenBank中不同型别腺病毒的六邻体基因序列特点,设计不同型腺病毒的特异性引物,以PCR方法进行基因分型,建立基因分型方法,并利用此方法对广州市2004年7月某幼儿园流行的腺病毒感染进行了基因分型.结果 建立了呼吸道腺病毒的基因分型方法.广州市2004年7月某幼儿园流行的腺病毒为3型腺病毒.结论 PCR方法可进行腺病毒的基因分型,且简便、结果可靠,便于推广应用.     

颅内海绵状血管瘤 CCM1基因第12外显子及其5′端内含子新突变位点

目的　探讨 CCM1基因突变在中国人颅内海绵状血管瘤 ( intracranial cavernous angiomas,ICCA)发病中所起的作用。方法　收集我院神经外科 2 0 0 2年 6月～ 2 0 0 3年 2月收治并经手术病理证实的2 1例 ICCA患者及 15名正常健康对照者 ,从外周静脉血中提取 DNA,PCR法扩增 CCM1基因第 12外显子及其两侧部分内含子序列 ,应用 DNA直接测序技术对扩增产物进行检测。结果　 5例患者中检测出 3处 CCM1基因突变 ,均为首次发现。其中 ,5例患者中均存在 1172 C→ T的错义突变 ,使编码 KRIT1蛋白391位的氨基酸由丝氨酸变成苯丙氨酸。另有 1例患者存在 116 0 A→ C的错义突变 ,使编码 KRIT1蛋白387位氨基酸的谷氨酰胺变成脯氨酸。另一个突变发生在第 12外显子 5′端内含子区域 ,5例患者中有 4例第 4个碱基 C被 T取代。对照组检测结果无异常。结论　中国 ICCA患者存在 CCM1基因第 12外显子的突变 ,并与 ICCA的发病有关     

Antigenic classification of Rickettsia felis by using monoclonal and polyclonal antibodies

Rickettsia felis is a flea-transmitted rickettsia. There is a discrepancy between its reported phylogenic and phenotypic identifications. Following the first report of R. felis, it was considered by tests with serologic reagents to be closely related to another recognized flea-transmitted rickettia, R. typhi. Subsequently, it appeared to be more closely related to spotted fever group (SFG) rickettsiae by genetic analysis. In the present work, R. felis was studied by microimmunofluorescence (MIF) serologic typing and with monoclonal antibodies (MAbs). Mouse polyclonal antisera to R. felis cross-reacted only with SFG rickettsiae. A neighbor-joining analysis based on MIF indicated that R. felis is actually related to SFG rickettsiae antigenically, clustering with R. australis, R. akari, and R. montanensis. A panel of 21 MAbs was raised against a 120-kDa protein antigen or a 17-kDa polypeptide of R. felis. They cross-reacted with most members of the SFG rickettsiae but not with R. prowazekii, R. typhi, or R. canadensis of the typhus group (TG) rickettsiae. Sixty-four MAbs previously generated to seven other ricketttsial species were tested with R. felis. Three MAbs reacted with the 120-kDa antigen and were generated by R. africae, R. conorii, and R. akari, respectively. They exhibited cross-reactivities with R. felis. All our data show that R. felis harbors the antigenic profile of an SFG rickettsia.     

伴有22三体的t(5;17)变异易位急性早幼粒细胞白血病

目的 探讨一例核型为47,XY,t(5;17),+22的少见急性早幼粒细胞白血病(acute promyelo-cytic leukemia,APL)的临床和实验特征.方法 在常规核型分析的基础上,应用荧光原位杂交(fluorescencein situ hybridization,FISH)和多重荧光原位杂交(multiplex fluorescence in situ hybridization,M-FISH)技术进一步检测该病例的细胞遗传学异常,并结合文献分析此类少见变异易位的临床特点.结果 FISH检测PML-RARa阴性,但77%的细胞显示存在17号RARa基因的重排或复制;BCR-ABL阴性,但74%的细胞显示有22号染色体的复制或重排.M-FISH明确RARa基因重排系5号与17号染色体易位所致,并证实了22号三体的存在.结论 变异型t(5;17)易位,形成NPM-RARa融合基因的急性早幼粒细胞白血病是APL中少见的类型.骨髓形态表现为奥氏小体缺如,核型中常伴有其它附加染色体异常,全反式维甲酸(all-trans retinoicacid,ATRA)联合化疗有效,但易复发,合并弥漫性血管内凝血及高白细胞者预后凶险.     

IPFM，MIPFM模型产生的仿真心率变异性信号的周期图与AR谱分析研究

为了研究不同心电序列转换方式及不同谱估计方法对心率变异性（ＨＲＶ）信号谱分析结果的影响，本文对积分脉冲频率调制（ＩＰＦＭ）模型及修正积分脉冲频率调制（ＭＩＰＦＭ）模型在输入不同振幅与频率的正弦信号时所产生的随机点过程，用两种心电序列转换方法进行转换得到仿真ＨＲＶ信导；然后，采用周期图与自回归（ＡＲ）谱估计方法计算这种厉真ＨＲＶ信号的功率谱。研究结果表明：①对于ＭＩＰＦＭ模型产生的随机点过程，同一心电序列转换方法所得出的仿真ＨＲＶ信号的ＡＲ谱与周期图的谱峰功率估计基本一致；而对ＩＰＦＭ模型则不完全一致。②ＭＩＰＦＭ模型仿真实验表明，对实际ＨＲＶ信号谱分析，使用低，高频谱峰功率比（ＲＦ）作为反映心脏自主神经张力平衡的指标时，除心电序列传换及谱估计方法可能造成的误差外，当低频谱峰靠近极低频谱峰时，根据ＲＦ值解释生理实验结果会有校大误差。③座分析实际ＨＲＶ信号的工作中，不同心电序列转换方式产生的伪谐波对ＨＲＶ谱分析结果的影响不大。     

Parkin基因启动子区-258T/G多态性与广西地区散发性帕金森病的相关性分析

Objective To investigate the association between the-258T/G polymorphism.in the pro-moter of parkin gene and the risk for sporadic parkinson's disease (SPD) in Guangxi Province, and in relationto the age of onset, of PD patients. Methods PCR-RFLP and sequence analysis were used to determine thegenotype of-258T/G polymorphism between all patients and healthy controls. Results The G allele was morecommon in patients than controls (55.20%:43.33% ,x2=6.898, P<0.05, OR=1.61, 95% CI: 1.13 ～2.30). The frequency of GG genotype was higher in patients than in controls (28.00 %: 18.33%, x2=7.159, P<0.05, OR=2.75, 95% CI : 1.31 ～ 5.77). The frequency of TG + GG genotype was higher in pa-tients than in controls (82.40%:68.33%, x2=6.551, P<0.05, OR=2.17.95%CI: 1.20 ～3.93). Afterbeing stratified by onset age, the frequencies of the G allele and GG genotype were significantly higher in pa-tients with onset age over 50 years than those in controls respectively. On the other hand, the frequency was notsignificantly different between the younger onset PD patients and the controls. Conclusion The parkin promot-er-258T/G polymorphism might be a risk factor for PD in Guangxi Province, and the G allele was increasedwith increasing age.     

用PCR扩增tim基因检测蓝氏贾第鞭毛虫

采用聚合酶链反应 (PCR)对蓝氏贾第鞭毛虫 (Giardialamblia)的磷酸丙糖异构酶 (triosephosphateisomerase ,缩写为tim)基因进行特异性扩增 ,结果扩增出 1条 6 83bp的DNA片段。此方法的特异性可高达10 0 % ,而其它DNA样本 ,如日本血吸虫 (Schistosomajaponicum)、刚地弓形虫 (Toxoplasmagondii)、微小隐孢子虫 (Cryptosporidiumparvum)、溶组织内阿米巴 (Entamoebahistolytica)、旋毛虫 (Trichinellaspiralis)和阴道毛滴虫 (Trichomonasvaginalis) ,以及人体血细胞等均未出现扩增反应。本法的敏感性也很高 ,可检测到0 4pg贾第虫包囊的DNA。 13株来自不同地理位置和 或宿主的贾第虫DNA样本在PCR中均各产生 1条长为 6 83bp的目的片段。上述结果表明本实验建立的检测贾第虫的PCR方法有效