A proposal for the addressing the needs of the pediatric pulmonary work force

Unprecedented opportunities and daunting difficulties are anticipated in the future of pediatric pulmonary medicine. To address these issues and optimize pediatric pulmonary training, a group of faculty from various institutions met in 2019 and proposed specific, long‐term solutions to the emerging problems in the field. Input on these ideas was then solicited more broadly from faculty with relevant expertise and from recent trainees. This proposal is a synthesis of these ideas. Pediatric pulmonology was among the first pediatric specialties to be grounded deliberately in science, requiring its fellows to demonstrate expertise in scientific inquiry (1). In the future, we will need more training in science, not less. Specifically, the scope of scientific inquiry will need to be broader. The proposal outlined below is designed to help optimize the practices of current providers and to prepare the next generation to be leaders in pediatric care in the future. We are optimistic that this can be accomplished. Our broad objectives are (a) to meet the pediatric subspecialty workforce demand by increasing interest and participation in pediatric pulmonary training; (b) to modernize training to ensure that future pediatric pulmonologists will be prepared clinically and scientifically for the future of the field; (c) to train pediatric pulmonologists who will add value in the future of pediatric healthcare, complemented by advanced practice providers and artificial intelligence systems that are well‐informed to optimize quality healthcare delivery; and (d) to decrease the cost and improve the quality of care provided to children with respiratory diseases.     

CD4+ T Cells: Guardians of the Phagosome

SUMMARY

CD4⁺ T cells are key cells of the adaptive immune system that use T cell antigen receptors to recognize peptides that are generated in endosomes or phagosomes and displayed on the host cell surface bound to major histocompatibility complex molecules. These T cells participate in immune responses that protect hosts from microbes such as Mycobacterium tuberculosis, Cryptococcus neoformans, Leishmania major, and Salmonella enterica, which have evolved to live in the phagosomes of macrophages and dendritic cells. Here, we review studies indicating that CD4⁺ T cells control phagosomal infections asymptomatically in most individuals by secreting cytokines that activate the microbicidal activities of infected phagocytes but in a way that inhibits the pathogen but does not eliminate it. Indeed, we make the case that localized, controlled, persistent infection is necessary to maintain large numbers of CD4⁺ effector T cells in a state of activation needed to eradicate systemic and more pathogenic forms of the infection. Finally, we posit that current vaccines for phagosomal infections fail because they do not produce this “periodic reminder” form of CD4⁺ T cell-mediated immune control.     

Reconciling discrepant findings for P3 brain response in criminal psychopathy through reference to the concept of externalizing proneness

We sought to address inconsistencies in the literature on amplitude of P3 brain potential response in offenders diagnosed with psychopathy. These inconsistencies contrast with the reliable finding of reduced P3 in relation to externalizing tendencies, which overlap with impulsive‐antisocial features of psychopathy, as distinguished from the affective‐interpersonal features. Employing a sample of incarcerated male offenders (N = 154) who completed the Psychopathy Checklist–Revised along with a three‐stimulus visual oddball task, we tested the hypothesis that impulsive‐antisocial features of psychopathy would selectively exhibit an inverse relationship with P3 amplitude. Clear support for this hypothesis was obtained. Our findings clarify the discrepant findings regarding psychopathy and P3, and establish P3 as a neurophysiological point of contact between psychopathy and externalizing proneness from the broader psychopathology literature.     

Novel insights on the role of CD8+ T cells and cytotoxic responses during Helicobacter pylori infection

Helicobacter pylori chronically persists in 50% of the human population and causes serious gastric and duodenal pathologies in 15% of infected people. Research on the immune response to the infection has mainly focused on the induction of CD4+ T cell responses. Human studies emphasize the potential clinical relevance of CD8+ cytotoxic T lymphocytes, however this cell type has barely been reported in studies employing mouse or gerbil models. Traditionally characterized as an extracellular bacterium, H. pylori has been identified inside epithelial and immune cells. Similarly to other intracellular bacteria, H. pylori infection of macrophages can alter autophagy and phagosome processing. A novel animal model of H. pylori infection demonstrates for the first time the induction of cytotoxic CD8+ T cell responses in pigs and localization of intracellular H. pylori within lymphoid aggregates. Here, we discuss novel mechanisms of host-H. pylori interactions that could lead to the induction of cytotoxic responses.     

Systems analysis of sex differences reveals an immunosuppressive role for testosterone in the response to influenza vaccination

Females have generally more robust immune responses than males for reasons that are not well-understood. Here we used a systems analysis to investigate these differences by analyzing the neutralizing antibody response to a trivalent inactivated seasonal influenza vaccine (TIV) and a large number of immune system components, including serum cytokines and chemokines, blood cell subset frequencies, genome-wide gene expression, and cellular responses to diverse in vitro stimuli, in 53 females and 34 males of different ages. We found elevated antibody responses to TIV and expression of inflammatory cytokines in the serum of females compared with males regardless of age. This inflammatory profile correlated with the levels of phosphorylated STAT3 proteins in monocytes but not with the serological response to the vaccine. In contrast, using a machine learning approach, we identified a cluster of genes involved in lipid biosynthesis and previously shown to be up-regulated by testosterone that correlated with poor virus-neutralizing activity in men. Moreover, men with elevated serum testosterone levels and associated gene signatures exhibited the lowest antibody responses to TIV. These results demonstrate a strong association between androgens and genes involved in lipid metabolism, suggesting that these could be important drivers of the differences in immune responses between males and females.The variability in the biology of human populations poses significant challenges in understanding different disease outcomes and developing successful therapeutics. The sources of this variation are likely the consequence of genetics, epigenetics, and the history of antigenic exposure (1, 2). As therapies targeting immune function are developed to improve clinical outcomes in cancer, viral and bacterial infections, autoimmune diseases, and transplantation, identifying the sources of immunological variation and finding biomarkers for immune health and dysfunction are crucial for their success (3).An important source of immunological variation is known to be the sex of the individual. Males experience a greater severity and prevalence of bacterial, viral, fungal, and parasitic infections than females, who also exhibit a more robust response to antigenic challenges such as infection and vaccination (4, 5). This stronger immune response in females could also explain why they more frequently develop immune-mediated pathologies during influenza infection, such as an overproduction of cytokines (cytokine storm) that contribute to an increase in capillary permeability and lung failure (6). Furthermore, females are at a higher risk for developing autoimmune diseases. In this later context, it is interesting to note that a recent study showed that females had, on average, 1.7 times the frequency of self-specific T cells as males (7). Despite the fact that initial observations relating the sex of the individual with the immune response were made many years ago (8), little is known about the mechanisms underlying these differences.Some sex-specific variations in the immune response can be directly attributed to sex hormones (9). In humans, sex steroids can bind to intracellular receptors located in immune cells such as monocytes, B cells, and T cells and activate hormone-responsive genes, suggesting that they can directly affect sex-related differences in both innate and adaptive immune responses (10). Whereas estrogens are associated with inflammation and can stimulate proliferation and differentiation of lymphocytes and monocytes, androgens suppress the activity of immune cells by increasing the synthesis of anti-inflammatory cytokines (11, 12).To date, no clear associations have been found between biological and clinical differences in the immune response between males and females in humans. In one study, results from public gene expression data (13) showed that many of the genes induced by a yellow fever vaccine were preferentially activated in females (14). However, whether these differences correlate with poor antibody outcomes remains to be determined.In this study, we sought to determine whether we could identify biomarkers from peripheral blood that could explain the sex-related differences in the serological response to the trivalent inactivated seasonal influenza vaccine (TIV) in both young and older cohorts.Young and older females had higher neutralizing antibodies than age-matched males, consistent with previous reports (15). Females also showed higher expression of inflammatory markers. However, none of these specific sex-related differences correlated with the observed disparities in the antibody response to TIV. Nevertheless, using a machine learning approach, we identified a set of genes previously shown to be regulated by testosterone and participating in lipid biosynthesis, whose expression was negatively associated with antibody responses to TIV in the male subjects in our study. Moreover, males with high levels of serum testosterone and expressing related gene signatures in blood cells showed the lowest neutralizing responses to TIV. These results suggest that testosterone might be immunosuppressive in vivo in humans, and indicate that its effect on an influenza vaccine and other immune responses could be due to the regulation of genes implicated in the metabolism of lipids.     

Psychiatric Diagnoses and Psychosocial Needs of Outpatient Deaf Children and Adolescents

Deaf youth may be more vulnerable to psychiatric disorders but very little research data is available. The current study identified prevalence rates of psychiatric disorders and examined the psychosocial needs and strengths of deaf youth aged 4–17 receiving specialized outpatient mental health services for the deaf. Compared to hearing peers, deaf youth had greater rates of attention deficit hyperactivity disorder, conduct, autism-spectrum and bipolar disorders and spent three times longer in treatment than their hearing peers. In the deaf subsample, moderate-severe risk was found in social functioning (33.3 %) and suicidal behavior (14 %). Deaf youth had moderate to severe impairment in social relationships (54.8 %), school functioning (42.9 %). Over one-third of deaf youth had impaired family relationships, living situation, communication, judgment and physical health. Deaf youth present with higher rates of certain clinical disorders and have deficits in multiple life domains that may impact functioning and create a longer treatment course.     

Enzyme functional evolution through improved catalysis of ancestrally nonpreferred substrates

In this study, we investigated the role for ancestral functional variation that may be selected upon to generate protein functional shifts using ancestral protein resurrection, statistical tests for positive selection, forward and reverse evolutionary genetics, and enzyme functional assays. Data are presented for three instances of protein functional change in the salicylic acid/benzoic acid/theobromine (SABATH) lineage of plant secondary metabolite-producing enzymes. In each case, we demonstrate that ancestral nonpreferred activities were improved upon in a daughter enzyme after gene duplication, and that these functional shifts were likely coincident with positive selection. Both forward and reverse mutagenesis studies validate the impact of one or a few sites toward increasing activity with ancestrally nonpreferred substrates. In one case, we document the occurrence of an evolutionary reversal of an active site residue that reversed enzyme properties. Furthermore, these studies show that functionally important amino acid replacements result in substrate discrimination as reflected in evolutionary changes in the specificity constant (k(cat)/K(M)) for competing substrates, even though adaptive substitutions may affect K(M) and k(cat) separately. In total, these results indicate that nonpreferred, or even latent, ancestral protein activities may be coopted at later times to become the primary or preferred protein activities.