Checkpoint-blocker-induced autoimmunity is associated with favourable outcome in metastatic melanoma and distinct T-cell expression profiles

Background Immune checkpoint blockers (ICBs) activate CD8⁺ T cells, eliciting both anti-cancer activity and immune-related adverse events (irAEs). The relationship of irAEs with baseline parameters and clinical outcome is unclear.Methods Retrospective evaluation of irAEs on survival was performed across primary (N = 144) and secondary (N = 211) independent cohorts of patients with metastatic melanoma receiving single agent (pembrolizumab/nivolumab—sICB) or combination (nivolumab and ipilimumab—cICB) checkpoint blockade. RNA from pre-treatment and post-treatment CD8⁺ T cells was sequenced and differential gene expression according to irAE development assessed.Results 58.3% of patients developed early irAEs and this was associated with longer progression-free (PFS) and overall survival (OS) across both cohorts (log-rank test, OS: P < 0.0001). Median survival for patients without irAEs was 16.6 months (95% CI: 10.9–33.4) versus not-reached (P = 2.8 × 10⁻⁶). Pre-treatment monocyte and neutrophil counts, but not BMI, were additional predictors of clinical outcome. Differential expression of numerous gene pathway members was observed in CD8⁺ T cells according to irAE development, and patients not developing irAEs demonstrating upregulated CXCR1 pre- and post-treatment.Conclusions Early irAE development post-ICB is associated with favourable survival in MM. Development of irAEs is coupled to expression of numerous gene pathways, suggesting irAE development in-part reflects baseline immune activation.Subject terms: Immunotherapy, Melanoma     

基于TCGA 数据库卵巢癌患者的miR-301b 表达量与生存状况生物信息学分析

目的 研究肿瘤基因图谱（the cancer genome atlas，TCGA）数据库中microRNA-301b（miR-301b）在478 例卵巢癌患者中的表达量与卵巢癌患者生存状况的关系。方法 对TCGA 数据库中478 例卵巢癌患者的miR-301b 表达量与生存状况进行分析，预测其靶基因及生物学活性。结果 miR-301b 高表达患者具有更长的生存时间, 是卵巢癌患者预后的保护因素（OS:P<0.001, DFS:P<0.05），综合3 个靶基因数据库的预测结果得到12 个靶基因，编码的蛋白多数与肿瘤的发生发展有关，其中靶基因TEA 结构域家族成员1（TEA domain family member 1，TEAD1） 与胞质多糖基化元件结合蛋白4(cytoplasmic polyadenylation element binding protein 4, CPEB4)的表达量与卵巢癌患者的预后相关（TEAD1:P<0.05，CPEB4:P<0.05）。结论 miR-301b 表达对卵巢癌患者的预后具有重要的意义，表现出抑癌因子的作用，对卵巢癌的预后评估和治疗具有重要的指导意义。     

山东济宁某医院门诊患者幽门螺杆菌感染检测分析

目的探讨分析山东济宁地区自然人群幽门螺杆菌的流行病学特征,为防治提供参考。方法于2012-05/2013-05采集山东济宁市第一人民医院胃镜室就诊患者580例,采用14C-UBT检测法与血清幽门螺杆菌Ig G抗体ELISA法对所有研究对象的幽门螺杆菌感染情况进行检测,并结合相关问卷调查,分析其流行病学特征。结果该医院门诊患者幽门螺杆菌总感染率45.2%,其中男性感染率59.5%,女性感染率40.5%,不同性别感染幽门螺杆菌感染阳性率差异比较无统计学意义(P0.05);各年龄段幽门螺杆菌的感染率从31.4%~53.1%不等,农民、商人及工人幽门螺杆菌感染率分别为78.6%、70.7%、68.8%,高于其他职业,差异有统计学意义(P0.05),但各年龄段间幽门螺杆菌感染率的差异比较无统计学意义(P0.05)。幽门螺杆菌感染与吸烟、饮酒、家庭收入无关,差异无统计学意义(均P0.05),与个人饮食卫生习惯、家庭教育程度及职业有关,差异有统计学意义(P0.05)。结论山东济宁市某医院门诊患者幽门螺杆菌总感染率较高,其感染率与职业、个人及家庭生活习惯等有关。     

Aging changes agonist induced contractile responses in permeabilized rat bladder

Aging alters bladder functions where a decrease in filling, storage and emptying is observed. These changes cause urinary incontinence, especially in women. The aim of this study is to examine how aging affects the intracellular calcium movements due to agonist-induced contractions in permeabilized female rat bladder. Urinary bladder isolated from young and old female Sprague-Dawley rats were used. Small detrusor strips were permeabilized with β-escin. The contractile responses induced with agonists were compared between young and old groups. Carbachol-induced contractions were decreased in permeabilized detrusor from old rats compared to young group. Heparin and ryanodine decreased carbachol-induced contractions in young rats where only heparin inhibited these contractions in olds. Caffeine-induced contractions but not inositol triphosphate (IP₃)-induced contractions were decreased in old group compared to youngs. The cumulative calcium response curves (pCa 8–4) were also decreased in old rats. Carbachol-induced calcium sensitization responses did not alter by age where GTP-β-S and GF-109203X but not Y-27632 inhibited these responses. Carbachol-induced contractions decrease with aging in rat bladder detrusor. It can be postulated as IP₃-induced calcium release (IICR) is primarily responsible for the contractions in older rats where the decrease in carbachol contractions in aging may be as a result of a decrease in calcium-induced calcium release (CICR), rather than carbachol-induced calcium sensitization.     

Binding mode of conformations and structure-based pharmacophore development for farnesyltransferase inhibitors

Farnesyltransferase (FTase) is one of the prenyltransferase family enzymes that catalyse the transfer of 15-membered isoprenoid (farnesyl) moiety to the cysteine of CAAX motif-containing proteins including Rho and Ras family of G proteins. Inhibitors of FTase act as drugs for cancer, malaria, progeria and other diseases. In the present investigation, we have developed two structure-based pharmacophore models from protein–ligand complex (3E33 and 3E37) obtained from the protein data bank. Molecular dynamics (MD) simulations were performed on the complexes, and different conformers of the same complex were generated. These conformers were undergone protein–ligand interaction fingerprint (PLIF) analysis, and the fingerprint bits have been used for structure-based pharmacophore model development. The PLIF results showed that Lys164, Tyr166, TrpB106 and TyrB361 are the major interacting residues in both the complexes. The RMSD and RMSF analyses on the MD-simulated systems showed that the absence of FPP in the complex 3E37 has significant effect in the conformational changes of the ligands. During this conformational change, some interactions between the protein and the ligands are lost, but regained after some simulations (after 2 ns). The structure-based pharmacophore models showed that the hydrophobic and acceptor contours are predominantly present in the models. The pharmacophore models were validated using reference compounds, which significantly identified as HITs with smaller RMSD values. The developed structure-based pharmacophore models are significant, and the methodology used in this study is novel from the existing methods (the original X-ray crystallographic coordination of the ligands is used for the model building). In our study, along with the original coordination of the ligand, different conformers of the same complex (protein–ligand) are used. It concluded that the developed methodology is significant for the virtual screening of novel molecules on different targets.     

Erratum to: Specific stressors in endonasal skull base surgery with and without navigation

European Archives of Oto-Rhino-Laryngology -