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Lukas F. Mager Carsten Riether Christian M. Schürch Yara Banz Marie-Hélène Wasmer Regula Stuber Alexandre P. Theocharides Xiaohong Li Yu Xia Hirohisa Saito Susumu Nakae Gabriela M. Baerlocher Markus G. Manz Kathy D. McCoy Andrew J. Macpherson Adrian F. Ochsenbein Bruce Beutler Philippe Krebs 《The Journal of clinical investigation》2015,125(7):2579-2591
Myeloproliferative neoplasms (MPNs) are characterized by the clonal expansion of one or more myeloid cell lineage. In most cases, proliferation of the malignant clone is ascribed to defined genetic alterations. MPNs are also associated with aberrant expression and activity of multiple cytokines; however, the mechanisms by which these cytokines contribute to disease pathogenesis are poorly understood. Here, we reveal a non-redundant role for steady-state IL-33 in supporting dysregulated myelopoiesis in a murine model of MPN. Genetic ablation of the IL-33 signaling pathway was sufficient and necessary to restore normal hematopoiesis and abrogate MPN-like disease in animals lacking the inositol phosphatase SHIP. Stromal cell–derived IL-33 stimulated the secretion of cytokines and growth factors by myeloid and non-hematopoietic cells of the BM, resulting in myeloproliferation in SHIP-deficient animals. Additionally, in the transgenic JAK2V617F model, the onset of MPN was delayed in animals lacking IL-33 in radio-resistant cells. In human BM, we detected increased numbers of IL-33–expressing cells, specifically in biopsies from MPN patients. Exogenous IL-33 promoted cytokine production and colony formation by primary CD34+ MPN stem/progenitor cells from patients. Moreover, IL-33 improved the survival of JAK2V617F-positive cell lines. Together, these data indicate a central role for IL-33 signaling in the pathogenesis of MPNs. 相似文献
84.
Austin Stephen F. Mors Ole Nordentoft Merete Hjorthøj Carsten R. Secher Rikke G. Hesse Morten Hagen Roger Spada Marcantonio Wells Adrian 《Cognitive therapy and research》2015,39(1):61-69
Cognitive Therapy and Research - The Self Regulatory Executive Function (S-REF) model implicates maladaptive metacognitive beliefs and processes in the predisposition and/or maintenance of positive... 相似文献
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Burkert Pieske Carsten Tschpe Rudolf A. de Boer Alan G. Fraser Stefan D. Anker Erwan Donal Frank Edelmann Michael Fu Marco Guazzi Carolyn S.P. Lam Patrizio Lancellotti Vojtech Melenovsky Daniel A. Morris Eike Nagel Elisabeth Pieske-Kraigher Piotr Ponikowski Scott D. Solomon Ramachandran S. Vasan Frans H. Rutten Adriaan A. Voors Frank Ruschitzka Walter J. Paulus Petar Seferovic Gerasimos Filippatos 《European journal of heart failure》2020,22(3):391-412
Making a firm diagnosis of chronic heart failure with preserved ejection fraction (HFpEF) remains a challenge. We recommend a new stepwise diagnostic process, the ‘HFA–PEFF diagnostic algorithm’. Step 1 (P=Pre‐test assessment) is typically performed in the ambulatory setting and includes assessment for heart failure symptoms and signs, typical clinical demographics (obesity, hypertension, diabetes mellitus, elderly, atrial fibrillation), and diagnostic laboratory tests, electrocardiogram, and echocardiography. In the absence of overt non‐cardiac causes of breathlessness, HFpEF can be suspected if there is a normal left ventricular (LV) ejection fraction, no significant heart valve disease or cardiac ischaemia, and at least one typical risk factor. Elevated natriuretic peptides support, but normal levels do not exclude a diagnosis of HFpEF. The second step (E: Echocardiography and Natriuretic Peptide Score) requires comprehensive echocardiography and is typically performed by a cardiologist. Measures include mitral annular early diastolic velocity (e′), LV filling pressure estimated using E/e′, left atrial volume index, LV mass index, LV relative wall thickness, tricuspid regurgitation velocity, LV global longitudinal systolic strain, and serum natriuretic peptide levels. Major (2 points) and Minor (1 point) criteria were defined from these measures. A score ≥5 points implies definite HFpEF; ≤1 point makes HFpEF unlikely. An intermediate score (2–4 points) implies diagnostic uncertainty, in which case Step 3 (F1: Functional testing) is recommended with echocardiographic or invasive haemodynamic exercise stress tests. Step 4 (F2: Final aetiology) is recommended to establish a possible specific cause of HFpEF or alternative explanations. Further research is needed for a better classification of HFpEF. 相似文献
87.
In order to structure the sensory environment our brain needs to detect changes in the surrounding that might indicate events of presumed behavioral relevance. A characteristic brain response presumably related to the detection of such novel stimuli is termed mismatch negativity (MMN) observable in human scalp recordings. A candidate mechanism underlying MMN at the neuronal level is stimulus-specific adaptation (SSA) which has several characteristics in common. SSA is the specific decrease in the response to a frequent stimulus, which does not generalize to an interleaved rare stimulus in a sequence of events. SSA was so far mainly described for changes in the response to simple pure tone stimuli differing in tone frequency. In this study we provide data from the awake rat auditory cortex on adaptation in the responses to frequency-modulated tones (FM) with the deviating feature being the direction of FM modulation. Adaptation of cortical neurons to the direction of FM modulation was stronger for slow modulation than for faster modulation. In contrast to pure tone SSA which showed no stimulus preference, FM adaptation in neuronal data differed sometimes between upward and downward FM. This, however, was not the case in the local field potential data recorded simultaneously. Our findings support the role of the auditory cortex as the source for change-related activity induced by FM stimuli by showing that dynamic stimulus features such as FM modulation can evoke SSA in the rat in a way very similar to FM-induced MMN in the human auditory cortex. 相似文献
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89.
Samuel Sutiono Katharina Satzinger Andr Pick Jrg Carsten Volker Sieber 《RSC advances》2019,9(51):29743
Pyruvate decarboxylase (PDC) is a key enzyme for the production of ethanol at high temperatures and for cell-free butanol synthesis. Thermostable, organic solvent stable PDC was evolved from bacterial PDCs. The new variant shows >1500-fold-improved half-life at 75 °C and >5000-fold-increased half-life in the presence of 9 vol% butanol at 50 °C.Pyruvate decarboxylase (PDC) is a key enzyme for the production of ethanol at high temperatures and for cell-free butanol synthesis.For many years, bioethanol has been used widely as an additive in gasoline or as a fuel by itself.1 To avoid competition with food, production of ethanol from plant-derived starch or sugar (first generation) has shifted to lignocellulosic biomass (second generation). To date, most of the bioethanol produced industrially still utilises yeasts as the main fermentation organism.1–3 However, in recent years, several efforts have been made to use thermophilic microorganisms as the new framework.1,3 The main motivating forces behind this are the volatility of ethanol at higher temperatures, which facilitates easy product removal, reduced risk of contamination and feasibility of consolidated bioprocessing (CBP). In this process, cellulolytic ethanologenic thermophilic microorganisms are applied, thus reducing the energy consumption required for heat exchange between biomass pre-treatment, fermentation and product separation and to avoid cellulase inhibition by accumulating glucose.3,4There are two major pathways for producing ethanol from pyruvate, the central metabolite in glycolysis: non-oxidative decarboxylation via pyruvate decarboxylase (PDC) and oxidative decarboxylation via pyruvate dehydrogenase (PDH) or pyruvate ferredoxin oxidoreductase (PFOR). Non-oxidative ethanol productions are commonly found in yeasts and other ethanologenic bacteria, while PDH and PFOR routes are described in thermophilic microorganisms.3,4 PDC mode may offer advantages compared with PDH and PFOR, as it is thermodynamically more favourable and will not lead to any other organic acid by-products.3–5 In fact, all industrially relevant ethanol producing organisms use PDC. Thermostable PDCs are, therefore, suggested to play an important role in creating homo-ethanologenic, thermophilic microorganisms.5,6Until recently, there were only limited efforts described in literature for improving the thermostability of PDC. Ancestral sequence reconstruction, supposedly a powerful method of resurrecting ancient thermostable enzymes, did not yield more thermostable PDC.7 A computational Rosetta-based design resulted in several variants with improved stability, determined by differential interference contrast (DIC) microscopy; unfortunately, the work was not corroborated by kinetic activity and stability data.8 Another effort to redirect the specificity of a thermostable, acetolactate synthase to perform a PDC-like reaction by conventional directed evolution did not yield variants either, with activity similar to that of bacterial PDC.9 Thus, creating thermostable PDC variants remains as the main challenge towards second generation ethanol production by thermophilic microorganisms.Besides acting as an important enzyme for ethanol production, PDC has also been applied in the in vitro production of n-butanol (Scheme 1).10,11 Butanol together with other longer-chain alcohols, such as 1-propanol, isobutanol and isopentanol, is regarded as the next-generation biofuel, due to its closer resemblance to traditional gasoline.12 Thus, there is an increasing demand to produce longer-chain alcohols sustainably.12 Industrially, butanol is still produced from petroleum-derived propene utilizing Co-catalyst, H2, and CO via oxo synthesis and Reppe process.13 Albeit its efficiency, production of butanol from petroleum is not sustainable.Open in a separate windowScheme 1Simplified pathway to produce ethanol and 1-butanol from lignocellulosic biomass via pyruvate decarboxylase (PDC). There are two major pathways for producing 1-butanol via pyruvate: CoA-dependent or proline-dependent condensation. ADH is an alcohol dehydrogenase.In a more sustainable way, butanol can be produced via an acetone–butanol–ethanol (ABE) process, utilising Clostridium acetobutylicum.12,14 Recent work on metabolic engineering has demonstrated the possibility of producing butanol in other microorganisms.15,16 However, one of the major challenges in butanol fermentation is still the toxicity of butanol to many microorganisms at relatively low concentrations (<2 vol%).17,18 This effect, however, is less pronounced for the enzymes catalysing butanol production in vitro.10,19 Many enzymes can already tolerate higher organic solvent concentrations than the corresponding microorganisms.20 Furthermore, engineering enzyme stability towards organic solvents is less challenging than evolving microorganisms to withstand the same concentration of organic solvents.17,21 Therefore, in vitro butanol production emerges as a very promising alternative to traditional butanol fermentation. Thus, in this work, we focused on the engineering of PDC towards higher thermal stability for prospective ethanol production in thermophilic microorganisms and improved stability in butanol for applications in in vitro, artificial butanol synthesis.Prior to engineering a PDC, we characterised two new yeast PDCs from Candida glabrata (CgPDC) and Zygosaccharomyces rouxii (ZrPDC), as well as other PDCs reported in the literature, to determine the most suitable template. As presented in 22 Characterisation of bacterial PDCs showed similar findings to the previous report, with PDC from Acetobacter pasteurianus (ApPDC) demonstrating the highest kinetic stability (T501 h) and melting temperature (Tm).22T501 h is defined as the temperature at which 50% of the enzymes remained active after 1 h incubation, while Tm is defined as the temperature at which 50% of the enzymes are in an unfolded state.23 In general, bacterial PDCs showed higher activity at 25 °C and overall stability (T501 h and Tm) than newly characterised CgPDC and ZrPDC.Summary of kinetic characterisations and thermostability of WT PDCs and variants
Open in a separate windowa T 50 1 h is defined as the temperature at which the enzyme gives 50% remaining activity after 1 h incubation (Fig. S1).23bMelting temperature was determined using Thermofluor assay (Fig. S1).cThe Hill coefficient was determined according to the equation: . Cg is Candida glabrata, Zr is Zygosaccharomyces rouxii, Ap is Acetobacter pasteurianus, Zm is Zymomonas mobilis and Zp is Zymobacter palmae.Another PDC that was reported to have improved stability, called 5TMA (Rosetta-designed ZmPDC), was also characterised in this study to fill the gap remaining due to the lack of data on activity and kinetic stability in the original study.8 It was claimed that 5TMA did not show any loss of molar ellipticity, measured by circular dichroism and that it was stable at 60 °C, observed by DIC microscopy. However, our kinetic stability studies based on activity suggested otherwise. We observed that 5TMA was less stable than wild-type (WT) ZmPDC, the parental PDC, in respect to T501 h and Tm (8 It is worth mentioning that during our T501 h experiment, we observed that 5TMA did not show any aggregation in contrast to other WT PDCs. This could explain why the authors did not observe a phase transition in DIC of 5TMA, but did for WT ZmPDC.Our previous work on evolving thermostable, branched-chain α-keto acid decarboxylase from Lactococcus lactis (LlKdcA) showed that improved thermostability was also translated to increased stability against isobutanol.24 The direct relationship between thermostability and organic solvent stability has also been described in other enzyme classes.21,25,26 Therefore, to save time and expense in finding PDC variants with increased thermostability and butanol-stability, we developed a simple screening platform to screen only for improved thermostability. For library development, staggered extensions process (StEP) was utilised.27 StEP has been shown in previous work to be a robust and relatively easy approach for increasing thermostability.27 Three PDCs from Zymomonas mobilis (ZmPDC), Zymobacter palmae (ZpPDC) and ApPDC with relatively similar stability and activity, were chosen as parental templates.After screening about 800 colonies, we obtained several variants that showed improved thermostability in comparison with our control (WT ApPDC). The most thermostable variant (renamed PDC-Var. 1) was selected, and the mutations were determined by DNA sequencing. PDC-Var. 1 showed the highest sequence similarity to ApPDC (98%), bearing 13 substitutions (Fig. S2 and S3†). In comparison with ApPDC, the most thermostable PDC reported to date, PDC-Var. 1 exhibited increases of 8.2 °C and 7.0 °C in T501 h and Tm, respectively. Surprisingly, PDC-Var. 1 also showed improved activity in comparison with WT ApPDC, without significant change in Km (28 We later used this new variant as a new template to further increase its thermostability.In a previous work with LlKdcA, we successfully improved its thermal and isobutanol-stability by introducing seven amino acid substitutions (Var. 7M.D).24 As ApPDC and LlKdcA belong to the same α-keto acid decarboxylase family, we intended to transfer the seven beneficial substitutions of Var. 7M.D to our new PDC-Var. 1. A similar screening procedure was applied. From the seven libraries, only one variant showed improved stability. We named the new variant PDC-Var. 2, which displays a change at position 441 of PDC-Var. 1 from isoleucine to valine (Fig. S3†).24 PDC-Var. 2 exhibited T501 h and Tm of 78.5 °C and 82.0 °C, respectively, meaning an improvement of 5.4 °C and 5.0 °C compared with PDC-Var. 1 or an increase of 13.6 °C and 12.0 °C compared with WT ApPDC.To check the stability of PDC-Var. 2 in comparison with WT ApPDC for ethanol fermentation applications via thermophilic microorganisms, both enzymes were incubated at 65 °C, 70 °C and 75 °C (Fig. 1). At 65 °C, WT ApPDC showed a first-order deactivation kinetics, with a half-life of 57 min, while PDC-Var. 2 showed a half-life of 18 h. This improvement represented an almost 19-fold increase. At higher temperatures, the stability effect of PDC-Var. 2 became even more apparent. At 70 °C, WT ApPDC completely lost its activity after 10 min of incubation, while PDC-Var. 2 retained 25% of initial activity after 24 h incubation. At 75 °C, WT ApPDC was completely deactivated after 2 min, while PDC-Var. 2 retained more than 20% of initial activity after 12 h incubation. Based on a first-order kinetic deactivation, WT ApPDC exhibited half-lives of 1.2 min and 10.8 s at 70 °C and 75 °C, respectively. For PDC-Var. 2, the half-lives at 70 °C and 75 °C are 10.7 h and 7.3 h, respectively. As such, the improved stability of PDC-Var. 2 corresponded to a 522-fold and a 2438-fold increased half-life at 70 °C and 75 °C (Fig. 1), respectively. PDC-Var. 2 also demonstrated improved stability towards ethanol by tolerating ethanol up to 40 vol% at 50 °C in comparison with WT ApPDC that showed stability up to only 22 vol% (Fig. S4†). We stress that this new improved characteristic is important for ethanol production in vitro.19Open in a separate windowFig. 1Kinetic stability of WT ApPDC in comparison with PDC-Var. 2 at 65 °C (A), 70 °C (B) and 75 °C (C). Thermal denaturations of the WT and PDC-Var. 2 followed first order kinetics at any given temperature. Half-lives of WT ApPDC are 57 min, 1.2 min and 10.8 s at 65, 70 and 75 °C, respectively. Half-lives of Variant 2 are 18, 10.7 and 7.3 h at 65, 70 and 75 °C, respectively. Standard deviations are shown from three independent technical replications.Biotechnological production of butanol is challenging, mainly due to its high toxicity for microbial cells. Until now, no microorganism has been found in nature that can grow at butanol concentrations higher than 4 vol%.29 Recently, production schemes were proposed that utilise the solubility limit of butanol in water (9 vol% at 50 °C).10,11 Using solvent-stable enzymes and hands-on in vitro enzyme cascade, cell-free butanol production within a two-phase water/butanol system can be envisioned. Some enzymes from thermophilic microorganisms can already tolerate higher alcohol concentrations, such as aldolase from Saccharolobus solfataricus (previously known as Sulfolobus solfataricus), which was shown to retain full activity in a two-phase system.19At 50 °C, the most thermostable WT PDC, ApPDC, showed stability up to only 5.6 vol% butanol after incubation for 1 h (Fig. 2A). In 7 vol% butanol, WT ApPDC was completely deactivated. As expected, PDC-Var. 2 demonstrated exceptional stability, by retaining more than 70% of its initial activity in 9 vol% butanol after 1 h incubation at 50 °C (Fig. 2A). Further kinetic stability studies revealed that WT ApPDC was completely deactivated after 30 s incubation at 9 vol% butanol at 50 °C (Fig. 2B). PDC-Var. 2, however, maintained more than 40% of its initial activity after 24 h incubation and 15% of its initial activity after 48 h incubation (Fig. 2B). This corresponds to a half-life of 15 h and thus an over 5000-fold increase in half-life in comparison with WT ApPDC.Open in a separate windowFig. 2Stability of WT ApPDC and PDC-Var. 2 in the presence of butanol. (A) Stability of the WT ApPDC and the variant after incubation in different concentrations of butanol for 1 at 50 °C. Lines are drawn to ease reading. (B) Stability of the WT ApPDC and the variant over time in 9 vol% butanol at 50 °C. Standard deviations are shown from three independent technical replications.When a higher temperature is desired, e.g. 60 °C, as indicated by previous work, WT ApPDC could retain 50% of its activity only up to 2 vol% of butanol at 60 °C, while PDC-Var. 2 started to lose 50% of initial activity in the presence of 8 vol% butanol (Fig. S5†).10,11 Hence, with this new improved process stability and high activity (3,5 Improved butanol stability of PDC-Var. 2 should drive forward the already developed in vitro butanol production, either via CoA dependent or proline-facilitated aldehyde condensation pathways (Scheme 1).10,11 Additionally, improved thermostability and stability in the presence of butanol of PDC-Var. 2 will facilitate simpler product removal at high temperatures in cell-free butanol synthesis. 相似文献
Enzyme | V max (U mg−1) | K m (mM) | T 50 1 h a (°C) | T m b (°C) |
---|---|---|---|---|
CgPDC | 22.2 ± 0.4 | 9.1 ± 0.2 h: 2.02c | 49.6 | 55.5 |
ZrPDC | 16.7 ± 0.4 | 11.6 ± 0.4 h: 2.39c | 42.9 | 50.5 |
ApPDC | 80.3 ± 0.6 | 1.9 ± 0.1 | 64.9 | 70.0 |
ZmPDC | 92.5 ± 0.7 | 1.3 ± 0.1 | 62.4 | 66.5 |
ZpPDC | 79.7 ± 0.4 | 0.8 ± 0.1 | 61.2 | 65.0 |
5NPU7 | 20.7 ± 0.8 | 4.8 ± 0.4 h: 1.28c | 51.9 | 55.5 |
5TMA8 | 87.0 ± 0.7 | 1.8 ± 0.1 | 54.7 | 59.5 |
PDC-Var. 1 | 91.7 ± 0.7 | 2.1 ± 0.1 | 73.1 | 77.0 |
PDC-Var. 2 | 71.6 ± 0.7 | 1.5 ± 0.1 | 78.5 | 82.0 |
90.
Combination of in ovo electroporation and time‐lapse imaging to study migrational events in chicken embryos 下载免费PDF全文
Background : During embryonic development cell migration plays a principal role in several processes. In past decades, many studies were performed to investigate migrational events, occurring during embryonic organogenesis, neurogenesis, gliogenesis or myogenesis, just to name a few. Although different common techniques are already used for this purpose, one of their major limitations is the static character. However, cell migration is a sophisticated and highly dynamic process, wherefore new appropriate technologies are required to investigate this event in all its complexity. Results and Conclusions: Here we report a novel approach for dynamic analysis of cell migration within embryonic tissue. We combine the modern transfection method of in ovo electroporation with the use of tissue slice culture and state‐of‐the‐art imaging techniques, such as confocal laser scanning microscopy or spinning disc confocal microscopy, and thus, develop a method to study live the migration of myogenic precursors in chicken embryos. The conditions and parameters used in this study allow long‐term imaging for up to 24 hr. Our protocol can be easily adapted for investigations of a variety of other migrational events and provides a novel conception for dynamic analysis of migration during embryonic development. Developmental Dynamics 243:690–698, 2014. © 2013 Wiley Periodicals, Inc. 相似文献