逆转录聚合酶链反应微孔板反向杂交检测丙型肝炎病毒

近几年研究结果表明,丙型肝炎病毒（ＨＣＶ）是引起输血后肝炎的主要病原之一。１９９０年Ｗｅｉｎｅｒ等〔１〕首先建立了ＲＴＰＣＲ法检测ＨＣＶＲＮＡ,近几年来已被广泛应用于ＨＣＶ的研究,但该法采用套式ＰＣＲ技术,操作繁琐耗时且易引起交叉污染而出现假阳性。为此,我们建立了ＲＴＰＣＲ微孔板反向杂交法,采用ＨＣＶ特异性探针与ＰＣＲ扩增产物进行反向杂交,经酶呈色观察结果,不仅提高了检测敏感度与特异性,而且简化了操作,节省了时间,应用于临床后反应较好,现报告如下。材料与方法标本来源：标本来自本院传染科门诊与…     

广西不同人群庚型肝炎病毒感染状况的调查

目的 了解庚型肝炎病毒（ＨＧＶ）感染在广西柳州地区不同人群中的感染状况，并比较静脉毒瘾者与健康体检者ＨＧＶ，乙型肝炎病毒（ＨＢＶ）、丙型肝炎病毒（ＨＣＶ）与ＨＧＶ共同感染的特点，方法 应用酶联免疫法（ＥＬＡ）检测抗－ＨＧＶ，抗－ＨＣＶ，ＨＢＶＭ（ＨＢｓＡｇ，ＨＢｓＡｂ，ＨＢｅＡｇ，ＨＢｅＡｂ，ＨＢｃＡｂ），并对抗－ＨＧＶ阳性者随机抽取２０例（１９％）进一步用逆转录套式ＰＣＲ（ＰＴ－ｎＰＣＲ）法检测     

肝癌病人血清中庚型肝炎病毒非结构基因（NS）5区cDN …

通过逆转录－套式－聚合酶链反应，从２例肝癌患者血清中扩增出长９９４ｂｐ的庚型肝炎病毒（ＨＧＦ）ｃＤＮＡ序列，聚合酶链反应（ＰＣＲ）产物纯化后以双脱氧末端终止法从双向直接测定其序列。结果，所分离的２株ＨＧＶ ＮＳ５区９９４ｂｐ核苷酸与国外已发表的３株ＨＧＶ序列比较，同源性为８７．２１％￣９３．６７％；２株间的同源性为９３．９２％。根据所测得的ｃＤＮＡ序列推导出其编码的３１３氨基酸序列，在氨基酸水平上     

广州地区散发性戊型肝炎病毒基因片段序列分析

目的对广州地区散发性戊型肝炎病毒（ＨＥＶ）作基因片段序列分析。方法用逆转录套式聚合酶链反应（ＲＴ－ｎｅｓｔｅｄＰＣＲ）检测了８例广州地区散发性戊肝患者粪便和血清中的ＨＥＶＲＮＡ，其中３例粪便阳性。对阳性ＰＣＲ产物进行基因克隆、核酸序列分析。结果广州地区Ｇ１、Ｇ２、Ｇ３株与缅甸株（Ｂ）、巴基斯坦株（Ｐ）、墨西哥株（Ｍ）、中国新疆株（Ｃｈ１．１）和广州血清株（Ｇ－９）的核苷酸和氨基酸的同源性均值分别为８０．６７％和８８．６０％（Ｂ）、８１．２５％和８９．２０％（Ｐ）、７７．４５％和８４．８１％（Ｍ）、８１．２５％和８９．２０％（Ｃ）、９７．８５％和９６．２０％（Ｇ）。结论广州ＨＥＶ株有一定程度的变异。     

酶联免疫吸附法检测庚型肝炎病毒抗体

目的 探讨抗庚型肝炎病毒（ＨＧＶ）ＩｇＧ与各种病毒感染,丙氨到转氨酶（ＡＬＴ）及ＨＧＶ ＲＮＡ的相关性。方法 用酶联免疫吸附试验（ＥＬＩＳＡ）法检测了３１５例各种肝炎病毒（Ａ￣Ｅ）感染乾和１１７例健康献血员血清的抗－ＨＧＶ ＩｇＧ,并测定其ＡＬＴ,对抗－ＨＧＶ ＩｇＧ阳性的标本用逆转录－聚合酶链反应（ＲＴ－ＰＣＲ）法检测ＨＧＶ ＲＮＡ。结果 献血员抗－ＨＧＶ ＩｇＧ的阳性率为３．４２％（４／１１７     

庚型肝炎病毒感染对慢性丙型肝炎的临床与病理学影响

目的 探讨庚型肝炎病毒（ＨＧＶ）感染对慢性丙型肝炎（ＣＨ－Ｃ）的临床与病理学影响。方法 应用逆转录－聚合酶链反应（ＲＴ－ＰＣＲ）法对５３例经肝穿活检确诊的ＣＨ－Ｃ患者血清标本进行了ＨＣＶ－ＲＮＡ检测,并将合并与未合并ＨＧＶ感染者进行了临床与病理学对比。结果 ＨＣＶ－ＲＮＡ阳性１５例（２８．３０％）。合并与未合并ＨＧＶ感染者在临床表现、肝功能等生化指标水平、ＨＣＶ－ＲＮＡ阳性率及肝脏病理损害等方面差     

肝病患者中庚型肝炎病毒感染的检测

目的探讨临床肝病病人中庚型肝炎病毒（ＧＢＶ－Ｃ／ＨＧＶ）感染情况及临床特点。方法应用庚型肝炎病毒基因组５’ＵＴＲ两对寡核苷酸作为引物，建立逆转录套式聚合酶链反应，检测１６９例不同肝病患者血清标本中ＧＢＶ－Ｃ／ＨＧＶＲＮＡ，并对其中１例ＰＣＲ扩增产物进行克隆及测序。结果１６９例各型肝病病人ＧＢＶ－Ｃ／ＨＧＶＲＮＡ总的检出率为９５％（１６／１６９）。在２９例有手术输血史患者中，３１０％（９／２９）ＧＢＶ－Ｃ／ＨＧＶＲＮＡ呈阳性，明显高于无手术输血史组（５％，Ｐ＜００１）。序列分析显示１株庚肝病毒５’ＵＴＲ部分基因片段与已知庚肝病毒株核苷酸同源性在８９１４％～９８９１％之间。结论ＧＢＶ－Ｃ／ＨＧＶ感染普遍存在于临床肝病患者中，病人感染ＧＢＶ－Ｃ／ＨＧＶ的临床表现未发现有特殊性，ＧＢＶ－Ｃ／ＨＧＶ可能不是非甲～戊型肝炎的主要致病因子。     

急性白血病患儿脑脊液PCR扩增HCMV－DNA的研究

应用多聚酶链式反应（ＰＣＲ）扩增和洋地黄探针杂交的方法，对５３例急性白血病（ＡＬ）患儿脑脊液（ＣＳＦ）样本进行了检测。经过ＰＣＲ扩增，可见明显的人巨细胞病毒ＤＮＡ（ＨＣＭＶ－ＤＮＡ）４００ｂｐ扩增带；经洋地黄探针特异性杂交鉴定，ＡＬ患儿ＣＳＦ标本ＰＣＲ扩增产物的ＨＣＭＶ－ＤＮＡ阳性检出率为８３．０２％。本实验为ＡＬ病人ＣＳＦ的ＨＣＭＶ检测提供了一个简便方法。     

用重组结构区抗原检测抗丙型肝炎病毒IgM抗体方法？…

目的 检测抗丙型肝炎病毒（ＨＣＶ）结构区蛋白ＩｇＭ抗体。方法 采用丙型肝炎病毒Ｃ，Ｅ１、Ｅ２区重组抗原混合包被和分别包被酶标板；用兔抗人γ链血清处理人血清标本，再用固相包被羊抗兔抗体吸附兔抗人γ链－人ＩｇＧ复合物，建立了抗－ＨＣＶＩｇＭ检测方法。结果 对７６例现型肝炎病人血清进行抗－ＨＣＶ ＩｇＭ检测，同时与逆转录－巢式聚合酶链反应（ＲＴ＋ＰＣＲ）检测结果进行比较，再会得具有相关性（Ｐ〈０．００５     

我国急性散发性戊型肝炎病毒部分核苷酸序列分析

用逆转录套式聚合酶链反应（ＲＴ－ｎＰＣＲ）自深圳、长春、杭州等地４１份急性散发性戊型肝炎病人血清中获得２８株ＨＥＶｃＤＮＡ，对其中３株ＨＥＶｃＤＮＡ的ＯＲＦ２基因片段，用荧光法直接测定其核苷酸序列，并与戊型肝炎病毒墨西哥株（Ｍ）、缅甸株（Ｂ）和新疆流行株（ＣＨ１·１）进行了比较，结果该３株散发性ＨＥＶ与Ｍ株的核苷酸序列同源性分别为８０．２％、７９．９％和７９．４％；与Ｂ流行株的同源性为９５．５％、９３．９％和９５．１％；与散发株的同源性为９３．４％、９２．３％和９３．８％；与ＣＨ１·１的同源性为９７．０％、９６．５％和９５．９；表明该３株散发性ＨＥＶ与ＨＥＶ（Ｂ）和ＣＨ１·１的核酸序列同源性较高，可能属同一亚型。     

一种同时检测丙型与庚型肝炎病毒的逆转录—巢式？…

目的 庚型肝炎病毒（ＨＧＶ）与丙型肝炎病毒（ＨＣＶ）同属黄病毒科，且传播途径相似，重叠感染率高，本研究旨在建立一种同时检测ＨＧＶ与ＨＣＶ感染的方法。方法 根据ＨＣＶ与ＨＧＶ的基因序列分别选取５‘－ＵＴＲ（ＨＣＶ）与ＮＳ３（ＨＧＶ）的两套引物，在同一管内进行逆转录－巢式聚合酶锭反应，并初步应用于１５３例标本。结果 该方法能同时检出ＨＧＶ与ＨＣＶ感洒，扩增片段大小与设计相符。结论 该方法简便特异，适用     

Heterogeneity in E2 region of GBV-C/hepatitis G virus and hepatitis C virus

GB virus C/hepatitis G virus (GBV-C/HGV) is related distantly to hepatitis C virus (HCV). HCV has a hypervariable region (HVR), and exists as quasispecies in vivo. Although GBV-C/HGV also has replaceable amino acids in the presumed antigenic region, the existence and fluctuation of population of heterogeneous virus have not been evaluated. In this study, the heterogeneity of GBV-C/HGV and HCV was investigated by the single-strand conformation polymorphism (SSCP) analysis in six concomitantly infected patients. Two patients were observed for 4 years without any treatment, and four were treated with interferon-α (IFN). By SSCP analysis, amplicons of GBV-C/HGV RNA were separated into 1–5 bands on gels for each patient. The amplicons had different nucleotide but the same amino acid sequences in the presumed antigenic region. The amplicons of HCV RNA, separated into 1–4 bands, had different nucleotide and amino acid sequences in the HVR. In the two patients without treatment, the predominant strain of GBV-C/HGV was unchanged for the 4 years. In the four patients administered IFN, some strains of GBV-C/HGV disappeared after IFN therapy, whereas other strains persisted. The mean genetic distance among GBV-C/HGV strains represented by SSCP analysis was significantly lower than that of HCV (P < 0.05). The data indicate that: 1) GBV-C/HGV can be devoid of antigenic drift unlike HCV; 2) GBV-C/HGV has no HVR as seen in HCV in the presumed antigenic region; and 3) the sensitivity to IFN differs among GBV-C/HGV strains in the same hosts, as with HCV. J. Med. Virol. 55:109–117, 1998. © 1998 Wiley-Liss, Inc.     

Determination of hepatitis B virus genotype by flow-through reverse dot blot.

BACKGROUND: The clinical outcome and response to therapy of hepatitis B virus infection differ depending upon viral genotype. Most methods of determining the viral genotype are relatively time-consuming and costly. Moreover, the results of some methods are influenced by single nucleotide mutations. OBJECTIVES: To develop a novel HBV genotyping process insensitive to single nucleotide mutations using an improved reverse dot blot method employing the principle of "flow-through hybridization". STUDY DESIGN: The flow through reverse dot blot (FT-RDB) method was developed using DNA from different HBV genotypes. HBV sequences from Genebank were used to design primers and probes. Specificity and sensitivity of the method were evaluated with clinical samples in which the HBV viral load was quantified by real-time PCR. Results were compared to those of multiplex PCR and sequencing. Another 59 clinical samples were used to test the clinical applicability of the method. RESULTS: We showed that FT-RDB could be made insensitive to single nucleotide mismatch by adjusting the hybridization temperature. All HBV-negative samples showed no signals in the assay. The detection sensitivity of the method was found to be between 10(3) and 10(4) DNA copies/ml. The results of FT-RDB were 84% concordant with those of multiplex PCR, and 96% concordant with sequencing results in 101 cases. The genotype all 59 clinical samples was accurately identified. CONCLUSIONS: We demonstrated that the FT-RDB method was rapid, reliable, accurate and inexpensive. It appears to be useful for routine clinical HBV genotyping even in non-specialized hospital laboratories.     

广西HCV高危人群庚型肝炎病毒的新基因型核苷酸序列分析

目的 探讨广西HCv高危人群庚型肝炎病毒(HGv)的感染情况及其新基因型的核苷酸序列。方法 静脉药瘾者(IVDAs)85份、肝病患者(PLDs)80份和献血员(BDs)50份血清标本．用PCR法检测庚型肝炎病毒RNA，EIA法检测HBsAg、抗-HCV和抗-HIV；随机选出62份庚型肝炎病毒RNA阳性标本进行核苷酸序列分析，构建种系发生树作基因分型。结果 215份血清中HGv阳性者85份(39.53％)，HBsAg、抗-HGV和抗-HIV的阳性率分别为39.07％、42．79％和0；11份HGV RNA的测序结果证实其有3种基因型，其中5株为新基因型(亚洲型)，51份补测序，其中GBV—C型占3．23％，HGV型占30.65％，亚洲型占64．51％。结论 HGV的3种基因型中存在不同的基因亚型；广西IVDAs、PLDs和BDs中感染庚型肝炎病毒以亚洲型和HGV型为主。     

Genetic heterogeneity and molecular epidemiology of GB virus C/hepatitis G virus in China

OBJECTIVE: The inter- and intrapatient genetic variation of GB virus C (GBV-C)/hepatitis G virus (HGV) was investigated to characterize the molecular epidemiologic profile of GBV-C/ HGV infection in China, an area endemic for viral hepatitis. The intrapatient variation of hepatitis C virus (HCV) from the same patients was compared to that of GBV-C/HGV. STUDY DESIGN/METHODS: GB virus C/HGV RNA was amplified by polymerase chain reaction in 88 patients with hepatitis C, hepatitis B or presumed non-A-E hepatitis from three cities in China. Five clones of the GBV-C/HGV NS3 region were sequenced from each GBV-C/HGV RNA-positive patient. The corresponding region of HCV was also sequenced from patients co-infected with HCV. Representative sequences of the GBV-C/HGV NS3 region from each patient and those of isolates from other continents were subjected to phylogenetic analyses. RESULTS: GB virus C/HGV was detected in 22 (25.25%) of 88 patients: 9 (21.4%) of 42 patients with presumed non-A-E hepatitis, 10 (27.7%) of 36 patients with hepatitis C, 3 (30.0%) in 10 patients with hepatitis B and C, and in none of 60 volunteer blood donors. The extent of nucleotide variation was less between Chinese isolates (2.4-17%; median, 10.4%) than between Chinese isolates and seven isolates from outside China (10.5-19.5%; median, 15.3%). Intrapatient sequence variation ranged from 0 to 1.75%, with a mean of 0.57 +/- 0.51%. Phylogenetic analysis grouped most Chinese isolates into four geographically specific clusters with a divergence of 10% to 16% from each other. The ratio of nonsynonymous to synonymous substitutions of GBV-C/HGV (Ka/Ks 0.019) was much lower than for HCV (0.071) in the same patients. CONCLUSION: Chinese isolates of GBV-C/HGV are genetically distinct. There are local strains as well as shared strains between different locales. The extent of amino acid sequence conservation suggests strong selection against nonsynonymous substitutions in the GBV-C/HGV genome.