中国人幽门螺杆菌尿素酶B亚单位的基因克隆及序列分析

目的 克隆人幽门螺杆菌（ｈｅｌｉｃｏｂａｃｔｅｒ ｐｙｌｏｒｉ,Ｈｐ）尿素酶Ｂ基因（ｕｒｅＢ）,并分析其核苷酸序列的特性。方法 用ＰＣＲ技术从临床分离的Ｈｐ菌株基因组中扩增出ｕｒｅＢ基因,将其克隆至ｐＨＰ质粒上进行序列分析。结果 克隆得到的ｕｒｅＢ基因长度为１７１３ｂｐ,其核苷酸序列与ＧｅｎＢａｎｋ公布的序列有６１个碱基存在差异,同源为９６４４％,推定的氨基酸序列同源性为９９．６５％。结论：我们所     

人幽门螺杆菌18 000外膜蛋白与HspA双价疫苗的构建和表达

目的 :构建含人幽门螺杆菌 (Hp)热休克蛋白A(HspA)和Mr为 180 0 0的外膜蛋白编码基因的重组载体 ,进行核苷酸序列分析 ,并在E .coliBL2 1中表达。方法 :用PCR方法从HpDNA染色体中 ,扩增HspA编码基因片段。将目的基因HspA与载体 pET32a( )分别经kpnⅠ和BamHI双酶切后 ,进行连接、测序。同时将重组载体 pET32a( ) /HspA和pET32a( ) /Omp18,分别经HindIII和BamHI双酶切 ,通过凝胶电泳回收pET32a( ) /HspA和Mr180 0 0OMPDNA片段 ,经T4连接酶将HspA和Mr180 0 0OMP编码基因通过酶切粘端进行连接 ,而后转化并筛选含有两种目的基因的重组载体 ,并在大肠杆菌BL2 1(DE30 )中表达。表达产物经Ni NTA琼脂糖树脂纯化后 ,以Westernblot分析其抗原性。结果 :经酶切、测序表明 ,插入的基因片段为HpHspA和Mr 为 180 0 0OMP编码基因 ,由 891个碱基组成 ,与GenBank中登录的序列相比较 ,有 1.15 %的碱基发生变异 ,1.2 6 %的氨基酸残基改变。经SDS PAGE分析发现 ,融合基因表达的蛋白Mr 为 5 1× 10 3 ,其中 pET32a( )表达的蛋白Mr 约为 2 0×10 3 ,可溶性表达产物占菌体总蛋白的 18.96 %。重组蛋白经Ni NTA琼脂糖树脂纯化后 ,其纯度达 95 %以上。用Westernblot分析显示 ,该重组蛋白可被Hp阳性患者的血清及抗Mr为 180 0 0OMP单     

不同基因型HCV膜区（E2）基因克隆及亲、疏水性分析

目的 研究丙型肝炎病毒（HCV）不同基因型膜区序列变异及其变异规律。方法 克隆不同基因型HCV的膜区基因,序列测定,核苷酸和氨基酸序列比较和分析。结果 不同基因型膜区基因相似性不同,从同一血清样本获得的不同克隆间,其同源性核苷酸大于99．2％,氨基酸大于99．9％。相同亚型核苷酸和氨基酸同源性大于80％。同型基因核苷酸和氨基酸同源性分别为（63．9－75．0）％和（64．9－72．8）％。异型基因同源性核苷酸为（59．4－67．0）％,氨基酸为（56．5－66．3）％。氨基酸序列变化在某些部位有一定保守性。不同基因HCV高变区（HVR）的亲水性和疏水性变化小于其下游3′端区域。结论 HCV基因变化可能有一定规律性。     

人源肠毒素大肠杆菌CS3伞毛抗原结构基因的克隆…

利用体外基因扩增技术（ＰＣＲ）和ＤＮＡ重组技术，扩增克隆了人源肠毒素大肠杆菌（ＥＴＥＣ）的ＣＳ３伞毛抗原的结构基因。核苷酸序列分析证实克隆的ＤＮＡ片段长度为６０４核苷酸对（ｂｐ）。在该序列中含有单个开放阅读框架，并具有－１０区和－３５区启动子序列以及核糖体结合位点。根据核苷酸序列推导，ＣＳ３结构基因编码１６８个氨基酸。其中前１５个氨基酸为可能的信号肽部分。在该基因编码的氨基酸中，疏水氨基酸约占４６     

宫颈癌组织中人乳头瘤病毒16型L1基因的克隆及序列分析

目的人乳头瘤病毒１６型（ＨＰＶ１６）晚期基因区（Ｌ１）编码病毒的主要衣壳蛋白,且ＨＰＶ１６感染与宫颈癌发生、发展关系密切,故对中国妇女感染的ＨＰＶ１６基因进行克隆及序列分析有重要实际意义。方法采用聚合酶链反应技术（ＰＣＲ）扩增了３例中国妇女宫颈癌组织中ＨＰＶ１６的Ｌ１基因片段,并对其进行了克隆及全序列分析。结果发现３个ＨＰＶ１６Ｌ１基因核苷酸序列有４处均与最初报道的ＨＰＶ１６Ｌ１ＤＮＡ序列不同,并由此引起所编码的氨基酸亦发生变化。结论中国妇女宫颈癌组织中ＨＰＶ１６Ｌ１核苷酸有一定程度变异。     

牛IL-18基因的克隆及遗传进化分析

目的：克隆牛白细胞介素18（IL-18）全基因，并对其进行序列分析。方法：从ConA刺激培养的牛外周血淋巴细胞提取总RNA，利用巢式RT-PCR方法扩增出牛IL-18全长cDNA，将其克隆到pMDl8-T载体上，测序后进行序列分析。结果：成功地克隆到了牛IL-18全基因，序列分析表明，实验中所克隆到的牛IL-18序列与GeneBank所登录的牛IL-18核苷酸序列及其推导氨酸序列同源性分别是99．5％和99％。与人、猕猴、野猪、山羊属、马等核苷酸序列及其推导氨基酸序列同源性分别在84．9％-99．5％和74．9％～99％之间，研究结果在国内还未见报道。结论：成功地从牛外周血中克隆到了牛IL-18的基因，其全长为598bp。     

福氏2a志贺菌磷酸烯醇丙酮酸盐合成酶基因的克隆与序列分析

目的：福氏2a志贺菌301株染色体编码与代谢相关的酶类基因，分析结构特点并进行同源性比较，以期部分阐明其与大肠杆菌生化特性相似的分子生物学基础。方法：鸟枪法随机克隆福氏2a志贺菌染色体DNA，经探针杂交和末端核苷酸序列测定筛选出带有磷酸烯醇丙酮酸合成酶（pps）完整基因的阳性克隆，利用exouclease Ⅲ制备嵌套缺失体亚克隆，采用双脱氧链末端终止法测定核苷酸序列。结果：福氏2a志贺菌301株pps基因（全长2474bp）与大肠杆菌pps基因核苷酸及氨基酸序列的同源性分别为98．8％和97．6％。编码区上游和下游存在较多变异。福氏2a志贺菌301株pps基因与GenBank中其它菌株pps基因的同源性均低于55％。结论：福氏2a志贺菌pps基因苷酸序列与大肠杆菌pps基因核酸序列高度同源。     

人淋巴细胞免疫反应性生长激素基因调控序列的克隆与鉴定

目的：克隆和鉴定人淋巴细胞免疫反应性生长激素（ｉｒＧＨ）基因调控序列的核苷酸顺序。方法：通过ＰＣＲ扩增出人淋巴细胞ｉｒＧＨ基因５＇近端的调控序列,然后将其与质粒ＰＧＥＭ７Ｚｆ（＋）连接,经转化蓝白斑筛选、酶切鉴定,获得ＰＧＥＭ７Ｚｆ（＋）－ｉｒＧＨ ＤＮＡ（－４８４－＋２ｂｐ）重组质粒,进行序列测定。结果：显示ｉｒＧＨ基因５＇近端的调控序列与垂体细胞ＧＨ基因的５＇近端调控序列的核苷酸顺序完全相同。     

柔嫩艾美耳球虫（E.tenella）BJ株TA4基因的克隆的序列分析

对柔嫩艾美耳球虫（Ｅ．ｔｅｎｅｌｌａ）ＢＪ株ＴＡ４基因进行了克隆和测序分析。经纯化的Ｅ．ｔｅｎｅｌｌａＢＪ株７ｈ孢子化卵囊的总ＲＮＡ为模板，根据国外报道的序列设计一对引物，用ＲＴ－ＰＣＲ方法扩增出ＢＪ虫株的ＴＡ４基因。用常规基因克隆方法把ＢＪ株ＴＡ４基因插入ｐＧＥＭ－Ｔ克隆载体，选取正方向插入的一个阳性克隆进行酶切分析及插入片段的全序列测序分析。结果表明：该序列全长１２２７个核苷酸，有一个含２３０     

Dystrophin基因常见易缺失外显子片段的克隆

目的对Dystrophin基因18个常见易缺失外显子片段进行克隆、鉴定,以克隆产物作为核苷酸探针为研制Dystrophin基因缺失检测微阵列作准备。方法以人类基因组DNA为模板,应用18对引物,对Dystrophin基因常见易缺失外显子片段进行PCR扩增。将扩增产物与pGEM-T Easy载体连接,转化E．coli JM109感受态细胞。通过平板培养,挑选阳性克隆。提取重组质粒,Not I酶切,获得完整的探针片段,并作测序鉴定。通过核酸序列数据库相似性检索工具验证序列的来源及其与GeneBank收录序列的相似性。结果PCR扩增出18个片段,与Dystrophin基因预期扩增片段大小相一致。重组克隆的酶切产物与PCR产物大小相近,与预期相一致。经测序获得18个克隆片段全序列,其核苷酸数量与预期基本一致,序列相似性检索分析证实了这些克隆片段与GeneBank收录的Dystrophin基因片段具有极高的同源性。结论克隆产物确为Dystrophin基因常见易缺失外显子片段。     

人幽门螺杆菌热休克蛋白A亚单位的基因克隆及序列分析

目的 获取人幽门螺杆菌（Ｈｐ）热休克蛋白Ａ亚单位（ＨｓｐＡ）的ＤＮＡ（ｈｓｐＡ）,并将它克隆到质粒ＰｉｎＰｏｉｎｔ＾ＴＭ Ｘａ－３中进行核苷酸序列分析。方法 利用ＰＣＲ技术扩增ＨｓｐＡ,并将其它向插入ＰｉｎＰｏｉｎｔ＾ＴＭ Ｘａ－３载体中通过４种荧光染料标记,激光检测的方法进行核苷酸序列分析。结果 ＤＮＡ序列分析表明,所克隆的ＨａｐＡ ＤＮＡ序列与ＧｅｎＢａｎｋ公布的一致。结论 本研究获得了序列正     

Helicobacter pylori heat shock protein A: serologic responses and genetic diversity

Helicobacter pylori synthesizes an unusual GroES homolog, heat shock protein A (HspA). The present study was aimed at an assessment of the serological response to HspA in a group of Chinese patients with defined gastroduodenal pathologies and determination of whether diversity is present in the nucleotide sequences encoding HspA in isolates from these patients. Serum samples collected from 154 patients who had an upper gastrointestinal pathology and the presence of H. pylori defined by biopsy were tested for an immunoglobulin G (IgG) serologic response to H. pylori HspA by an enzyme linked immunosorbant assay. HspA-encoding nucleotide sequences in H. pylori isolates from 14 patients (7 seropositive and 7 seronegative for HspA) were analyzed by PCR and direct sequencing of the PCR products. The sequencing results were compared to those of 48 isolates from other parts of the world. Of the 154 known H. pylori-positive patients, 54 (35.1%) were seropositive for HspA. The A domain (GroES homology) of HspA was highly conserved in the 14 isolates tested. Although the B domain (metal-binding site unique to H. pylori) resembled that in the known major variant, particular amino acid substitutions allowed definition of an HspA variant associated with isolates from East Asia. There were no associations between patient characteristics and HspA seropositivity or amino acid sequences. We confirmed in this study that the clinical outcomes of H. pylori infection are not related to HspA antigenicity or to sequence variation. However, B-domain sequence variation may be a marker for the study of the genetic diversity of H. pylori strains of different geographic origins.     

重组幽门螺杆菌热休克蛋白A亚单位的高效表达及其初步纯化

目的 在大肠杆菌中高效表达幽门螺直菌的热休克蛋白A基因（hspA)，并对其初步纯化。方法 用巢式PCR扩增hspA基因。经测序证实后，克隆于表达载体pIM-1中，转化大肠杆菌。以SDS－PAGE和免疫印迹分析目的蛋白的表达，并测定N－端氨基酸的序列。采用固相镍离子亲和层析，对重组hspA进行初步纯化。结果 扩增的hspA基因为357bp，并在大肠杆菌中得到高效可溶性表达。重组蛋白的表达量最高可达细菌总蛋白的60．5％。免疫印迹及氨基酸测序结果证实，表达产物为幽门螺杆菌hspA亚单位。固相镍离子亲和层析初步纯化的重组HspA的纯度为87．8％，结论 hspA亚单位的高效表达与初步纯化，为批量获得Hp亚单位抗原打下了基础。     

幽门螺杆菌HspA和UreB双价侯选疫苗株的构建

目的 构建表达幽门螺杆菌的组成成分热休克蛋白Ａ亚单位（ＨｓｐＡ）和尿素酶Ｂ亚单位（ＵｒｅＢ）的重组蛋的白质的侯选菌株。方法 用ＰＣＲ方法从幽门螺杆菌的染色休ＤＮＡ上分别扩增出ＨｓｐＡ和ＵｒｅＢ基因片段,将它们融合插入原核表达载体ｐＥＴ－２３ｂ（＋）中,并在ＢＬ２１（ＤＥ３）大肠杆菌表达。结果 经测序,ＨｓｐＡ－ＵｒｅＢ（ＨＵ）事例基因片段由２０６１ｂｐ组成,为编码６８７个氨基酸残基的多肽。ＳＤＳ－     

Helicobacter pylori Heat Shock Protein A: Serologic Responses and Genetic Diversity

Helicobacter pylori synthesizes an unusual GroES homolog, heat shock protein A (HspA). The present study was aimed at an assessment of the serological response to HspA in a group of Chinese patients with defined gastroduodenal pathologies and determination of whether diversity is present in the nucleotide sequences encoding HspA in isolates from these patients. Serum samples collected from 154 patients who had an upper gastrointestinal pathology and the presence of H. pylori defined by biopsy were tested for an immunoglobulin G (IgG) serologic response to H. pylori HspA by an enzyme linked immunosorbant assay. HspA-encoding nucleotide sequences in H. pylori isolates from 14 patients (7 seropositive and 7 seronegative for HspA) were analyzed by PCR and direct sequencing of the PCR products. The sequencing results were compared to those of 48 isolates from other parts of the world. Of the 154 known H. pylori-positive patients, 54 (35.1%) were seropositive for HspA. The A domain (GroES homology) of HspA was highly conserved in the 14 isolates tested. Although the B domain (metal-binding site unique to H. pylori) resembled that in the known major variant, particular amino acid substitutions allowed definition of an HspA variant associated with isolates from East Asia. There were no associations between patient characteristics and HspA seropositivity or amino acid sequences. We confirmed in this study that the clinical outcomes of H. pylori infection are not related to HspA antigenicity or to sequence variation. However, B-domain sequence variation may be a marker for the study of the genetic diversity of H. pylori strains of different geographic origins.     

幽门螺杆菌热休克蛋白A亚单位与大肠杆菌不耐热肠毒素B亚单位融合蛋白表达的研究

目的：获得大肠杆菌不耐热肠毒素B亚单位（LTB）与幽门螺杆菌保护性抗原热休克蛋白A亚单位（HspA）的融合蛋白。方法：PCR扩增ltB和hspA基因，依次构建至表达载体pIM-1，转化大肠杆菌，SDS-PAGE、免疫印迹分析目的蛋白表达情况。采用GM1ELISA和D( )-半乳糖亲和层析方法检测重组LTB-HspA融合蛋白LTB组分与GM1神经节苷脂结合活性。结果：重组LTB-HspA融合蛋白表达量最高可达细菌总蛋白的25％。免疫印迹检测结果证实为重组LTB-HspA融合蛋白。GM1ELISA和D( )-半乳糖亲和层析方法检测结果证实重组LTB-HspA融合蛋白具有与GM1神经节苷脂结合的活性。结论：LTB-HspA融合蛋白的表达研究，为研制幽门螺杆菌分子内佐剂疫苗打下了基础。     

Detection and identification of Helicobacter pylori by the polymerase chain reaction.

A polymerase chain reaction for the specific detection of Helicobacter pylori was developed using a primer pair derived from the nucleotide sequence of the urease A gene of H pylori. Specific amplification of a 411 base pair DNA fragment from all strains of H pylori tested was achieved. Ten organisms were detected using the PCR and the technique permitted direct detection of H pylori in clinical biopsy samples. PCR will be useful for both prospective and retrospective investigation of the aetiology and epidemiology of H pylori associated disease.     

Development of epidemiological method for the Helicobacter pylori by polymerase chain reaction.

The polymerase chain reaction was used to develop a method for the detection of Helicobacter pylori, a causative agent of gastritis, as well as for the elucidation of its mode of transmission. A genomic library of Helicobacter pylori DNA in Escherichia coli JM109 was constructed by cloning Hind III-digested DNA fragments into plasmid vector pUC18. The nucleotide sequences from seven recombinant clones were determined and five sets of oligonucleotide primers were synthesized on the basis of the sequences from five clones (B4, B9, B10, C15 and I22). The PCR amplifications with these primers were performed using DNA samples from five strains of Helicobacter pylori, two Campylobacter spp. and eleven species of enteric bacteria. Amplifications of the target DNA fragments in all of 5 strains of Helicobacter pylori were observed from the PCR with primers derived from clone B4, B9, C15 and I22. When the specificity was checked with the DNA samples from 13 other bacteria as template DNA for the PCR, specific amplification that produced the correct size of the target DNA of Helicobacter pylori was shown only in the PCR with primers derived from clone B9 and C15. The detection limit in the PCR amplification, determined by the heat-lysis method, was 500 cells of Helicobacter pylori.