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1.
用PCR—SSP方法研究广西壮族HIL—DQA1和B1基因多态性   总被引:4,自引:2,他引:2  
目的 检测广西壮族HLA-DQA1,B1基因的多态性。方法 应用PCR-SSP方法对140名健康、无血缘关系广西壮族人的HLA-DQA1和DQB1进行基因分型。结果 共检出7个DQA1等位基因和16个DQB1等位基因。在检出的DQA1等位基因中,0301的基因频率最高(35%),0401的基因频率最低(1.1%)。在DQB1等基因中,0601(22.1%),0301(20.7%),0501(13.  相似文献   

2.
新疆维族人群HLA—DR—DQ单倍型研究   总被引:3,自引:1,他引:3  
为了解HLA第2类基因(HLA-DR-DQ,-DP位点)在中国人群中的分布情况,应用PCR/SSO方法对新疆的主要民族维吾尔族人92例进行了HLA-DRB1、DRB3、DRB5和DQA1、DQB1五位点等位基因进行了分析,计算了它们在该人群中的分布频率,推导了DR-DQ五位点单倍型的结构及分布。通过与世界各主要人种和中国北方汉族的比较,证明维族在中华民族有共同基因背景的基础上,还表现出与西方人种有一定程度的血缘交流。为研究古丝绸之路人口迁移对中国维族遗传特征的影响提供了资料。  相似文献   

3.
应用PCR-RFLP技术,对新疆地区汉族健康群体进行了HLA-DQA1(49人)和-DQB1(47人)基因分型。在DQA18个等位基因中,DQA10301的基因频率最高(32.56%),0401最低(1.02%)。在DQB116个等位基因中,DQB10201(20.21%)、0301(15.96%)、0303(14.89%)为最常见;没有观察到05032、0504和0605。与河北固安县及江浙沪地区汉族群体进行比较,DQA1基因未发现存在差异。而DB10602(3.19%)与固安汉族(Pc=0.0144)和上海汉族(Pc=0.0140)有显著差异,DQB10503(8.52%)与上海汉族有显著差异(Pc=0.0216)。  相似文献   

4.
应用PCR-RFLP技术,对新疆地区汉族健康群体进行了HLA-DQA1(49人)和DQB1(47人)基因分型。在DQA118个等位基因中,DQA1*0301的基因频率最高(32.56%),*0401最低(1.02%)。在DQB116个等位基因中,DQB1*0201(20.21%),*0301(15.96%)、*0303(14.89%)为最常见;没有观察到*05032、*0504和*0605。与河北  相似文献   

5.
用PCR-SSP方法研究广西壮族HLA-DQA1和B1基因多态性   总被引:3,自引:0,他引:3  
目的 检测广西壮族HLADQA1 ,B1 基因的多态性。方法 应用PCRSSP 方法对140 名健康、无血缘关系广西壮族人的HLADQA1 和DQB1 进行基因分型。结果 共检出7 个DQA1 等位基因和16 个DQB1 等位基因。在检出的DQA1 等位基因中,0301 的基因频率最高(35 % ) ,0401 的基因频率最低(1 .1 % ) 。在DQB1 等位基因中,0601(22 .1 % ) ,0301(20 .7 % ) ,0501(13 .9 % ) 最为常见。未检出的等位基因包括HLADQA1 * 0201 ,0302 ,0601 ,DQB1 * 0603 ,0605 和0608 。结论 广西壮族HLADQA1 ,B1 基因的多态性不仅有中华民族的特点,而且也有其独特性。  相似文献   

6.
PCR/SSP结合PCR/SSCP分析湖南汉族HLA-DQA1等位基因多态性   总被引:2,自引:0,他引:2  
为准确阐明湖南汉族群体HLA-DQA1遗传多态性,采用PCR/SSP方法,并联合应用可同时区分HLA-DQA1*0101~0601等位基因的银染PCR/SSCP技术对60例随机选择的湖南汉族健康者作HLA-DQA1等位基因分型。结果表明,湖南汉族存在...  相似文献   

7.
HLA—DR,DQ基因多态性与系统性红斑狼疮相关性的研究   总被引:12,自引:1,他引:12  
应用聚合酶链反应结合顺序特异的寡核苷酸探针杂交(PCR/SSOPH)方法对江苏籍汉族SLE患者和健康对照组HLA-DRB1、DQA1:DQB1基因作寡核苷酸分型。结果发现患者组中DRB1*1501、DQA1*0102等位基因频率及HLA-DRB1*1501、-DQA1*0102、-DQB1*0602单倍型频率均明显高于正常对照组;相反,DRB1*04(DR4)、DQA1*0601频率则明显低于正常对照组。所有DQB1等位基因频率在两组间无显著差异,而DQA1*0102仅存在于DR2阳性的个体之中,推测汉族SLE的易感基因可能靠近DR位点,且与单倍型HLA-DRB1*1501、-DQA1*0102、-DQB1*0602紧密连锁,该单倍型可作为汉族SLE易感的遗传标记。相反DR4,DQA1*0601则对SLE发病可能有一定的保护性。  相似文献   

8.
中国广东汉族群体HLAⅡ类基因多态性的研究   总被引:3,自引:1,他引:3  
为探讨中国广东汉族群体HLAⅡ类基因多态性,采用PCR/SSO方法,随机选择102名广东籍汉族人进行了HLAⅡ类基因的DNA分型。测定了包括HLA-DRB1,DRB3,DRB5,DQA1,DQB1和DPB1等6个基因座位的等位基因。结果:共检出23种DRB1,3种DRB3,4种DRB5,8种DQA1,12种DQB1和12种DPB1基因。该人群的HLAⅡ类等位基因多态性的典型性表现在HLA-DRB*1202的不寻常优势和DRB1*02单倍型的结构的高度复杂性。还发现了很高频率的一个近年才被正式命名的DP新型:HLA-DPB1*2101,并且此型具有极不寻常的DRB1*1202-DPB1*2101的连锁不平衡。为分子流行病学研究提供了资料。  相似文献   

9.
HLA-DQA1等位基因与原发性高血压的相关性研究   总被引:15,自引:2,他引:15  
目的对原发性高血压患者进行HLA-DQA1等位基因的分型,分析高血压病患者的遗传易感性。方法用PCR-SSP技术对具有遗传家族史的高血压病患者52例及正常对照86例,进行HLA-DQA1等位基因的基因分型。结果HLA-DQA1*0302在高血压组的基因频率明显高于对照组(17.9573对3.5531,P<0.001)。而HLA-DQA1*0103却表现为正常组的增高。结论HLA-DQA1*0302基因与高血压的遗传易感性相关联,而HLA-DQA1*0103可能是高血压的一个保护基因  相似文献   

10.
中国湖北汉族HLA—Ⅱ类等痊基因频率的群体调查   总被引:8,自引:1,他引:7  
调查中国湖北汉族人群HLA-Ⅱ类基因频率。方法,用聚合酶链反应/序列特异性引物和聚合酶链反应/限制性片段长度多态性技术,对中国湖北汉族168名正常个体进行了HLA-DRB1(n=168)、HLA-DQB1(n=160)、HLA-DPB1(n=93)基因的多态性检测。结果共检出39种DRB1、15种DQB1和17种DPB1等位基因型别,等位基因频率较高的分别是:DRB1*0901(genefrequ  相似文献   

11.
Southern Africa is facing an unprecedented public health crisis due to the high prevalence of human immunodeficiency virus type 1 (HIV-1). Vaccine development and testing efforts, mainly based on elicitation of HIV-specific T cells, are under way. To understand the role of human leukocyte antigen (HLA) class II alleles in HIV pathogenesis and to facilitate HLA-based HIV-1 vaccine design, we analyzed the frequencies of HLA class II alleles within the southern African country of Botswana. Common HLA class II alleles were identified within the Botswana population through the molecular genotyping of DRB and DQB1 loci. The DRB1 allele groups DRB1*01, DRB1*02/15, DRB1*03, DRB1*11, and DRB1*13 were encountered at frequencies above 20%. Within the DQB1 locus, DQB1*06 (47.7%) was the most common allele group, followed by DQB1*03 (39.2%) and DQB1*04 (25.8%). We found that DRB1*01 was more common in HIV-negative than in HIV-positive individuals and that those who expressed DRB1*08 had lower median viral loads. We demonstrate that the frequencies of certain HLA class II alleles in this Botswana population differ substantially from those in North American populations, including African-Americans. Common allele groups within Botswana cover large percentages of other African populations and could be targeted in regional vaccine designs.  相似文献   

12.
Hu W  Tang L  Wang J  Wang B  Li S  Yu H  Tang W  Li H  Tan S  Shou W  Xiao C 《Tissue antigens》2008,72(5):474-477
In this work, polymorphism of human leukocyte antigen (HLA)-DRB1, -DQB1 and -DPB1 genes was detected using polymerase chain reaction-sequence-based typing method in 128 healthy unrelated volunteers from the Bai ethnic group of Yunnan province of southwest China. Among all the 28 alleles detected for the DRB1 gene, the most common allele was DRB1*120201 with a frequency of 16.41%, followed by DRB1*090102, DRB1*080302, DRB1*1404, DRB1*150101, DRB1*140101 and DRB1*160201, with frequencies of 10.16%, 9.77%, 9.38%, 8.98%, 8.59% and 8.21%, respectively. Among 19 DQB1 alleles detected, the most frequent allele was DQB1*030101/0309 (35.94%), followed by DQB1*050201 (11.33%), DQB1*060101/060103 (10.54%) and DQB1*0401 (10.16%). For the DPB1 locus, the most common alleles were DPB1*0501 (42.19%), DPB1*1301 (13.28%), DPB1*020102 (10.93%) and DPB1*040101 (9.77%). The comparison of HLA class II allele frequencies of Bais with those of other Chinese populations suggested that the Bai ethnic group belonged to the southern group of Chinese.  相似文献   

13.
HLA DRB1, DQA1 and DQB1 alleles were determined by DNA PCR-SSO typing in a sample of 99 individuals originating from Wielkopolska (midwestern Poland). A high number of alleles (38 DRB1, 8 DQA1 and 14 DQB1) was detected at each locus, many of them presenting notable frequencies in this population. The three HLA loci are thus characterized by very high heterozygosity levels (93% for DRB1, 85% for DQA1, and 88% for DQB1), which confirms the results found for other European populations. A total of 6 DRB1-DQA1-DQB1 haplotypes are detected with an estimated frequency higher than 5%, namely, DRB1*1501-DQA1*0102-DQB1*0602, DRB1*0701-DQA1*0201-DQB1*0201, DRB1*0101-DQA1*0101-DQB1*0501, DRB1*1101-DQA1*0501-DQB1*0301, DRB1*03011-DQA1*0501-DQB1*0201, and DRB1*1301-DQA1*0103-DQB1*0603. A genetic distance analysis between the Polish and other world populations tested for HLA class II indicates that the Wielkopolska community is close to geographically close, rather than linguistically related populations from Europe. More generally, a good agreement between genetics and geography is found for DRB1 and DQB1 polymorphisms in Europe, suggesting that these two loci are highly informative for assessing historical relationships among humans.  相似文献   

14.
HLA-DRB1、DQB1基因与汉族人群寻常型天疱疮的相关性研究   总被引:4,自引:0,他引:4  
目的 探讨 HL A- DRB1、DQB1位点基因在汉族人群寻常型天疱疮易感性中的作用。方法用序列特异性引物 -聚合酶链反应方法 ,对 6 1例寻常型天疱疮 (pemphigus vulgaris,PV)患者和 5 7名正常对照进行了 HL A- DRB1、DQB1等位基因的分型 ,并分析了 DRB1、DQB1基因在两组中的分布。结果 与正常对照组比较 ,PV组 DR4、DRB1* 14 (* 14 0 1、* 14 0 4、* 14 0 5 )基因频率明显增高 (Pc分别 <0 .0 5及P<0 .0 1) ,差异有显著性 ;PV组 DQB1* 0 5 0 3、DQB1* 0 30 2基因频率明显增高 (Pc均 <0 .0 5 ) ,差异有显著性。对 DR4阳性样本的组内基因亚型分型结果发现 ,PV组中 DRB1* 0 4 0 3、DRB1* 0 4 0 6频率显著增高(Pc<0 .0 5 ) ,差异有显著性。 PV患者组单倍型 HL A- DRB1* 0 4 ,DQB1* 0 30 2和 HL A- DRB1* 14 ,DQB1* 0 5 0 3频率明显增高 (P<0 .0 5 )。结论 HL A- DRB1* 0 4 ,DQB1* 0 30 2和 HL A- DRB1* 14 ,DQB1* 0 5 0 3可能是汉族人 PV推测的易感单倍型。  相似文献   

15.
South India is one of the oldest geophysical regions occupied mainly by Dravidian language-speaking people. In the present study, 84 unrelated healthy Nadar individuals from Tamil Nadu State were analyzed for human leukocyte antigen (HLA) DRB1* and DQB1* allele frequencies and their haplotype frequencies were analyzed by high resolution polymerase chain reaction (PCR)-typing of genomic DNA. Results revealed that Nadars possessed >0.1 allele frequencies of HLA DRB1*15011, 03, 04, 1404, 0701, 1001, and DQB1*0201, 03, 0501, and 0503. The highest frequencies of DRB1*0317 (0.048), DRB1*1317 (0.012), and DRB1*1404 (0.107) in the world were found among the Nadar caste. The most frequent two-locus haplotypes identified among the Nadars were DRB1*0701-DQB1*0201 and DRB1*1000-DQB1*0501, and DRB1*1404-DQB1*0503 and DRB1*15011-DQB1*0601. When compared with world populations, HLA DRB1*1322, DRB1*1434, and DQB1*0614 were identified exclusively among Nadars. The heterozygosity and Watterson's homozygosity tests indicated that balancing selection still operates among the South Indian caste groups. The hierarchical cluster analysis for DRB1 data from the Indian caste and population groups showed that the Nadars cluster with Kashmir Brahmins and North Indians. The present study shows that the Nadar caste has several unique alleles and haplotypes at high frequency that are rare or absent in other populations of India and the world.  相似文献   

16.
目的 从基因高分辨水平,分析中国汉族人群供-受者人类白细胞抗原(human leukocyte antigens,HLA)-A、B、Cw、DRB1、DQB1各位点等位基因频率和分布的多态性;及供-受者等位基因匹配情况.方法 采用基因测序分型(sequence based typing,SBT)、序列特异性寡核苷酸探针法(sequence specific oligonueleotide probe,SSOP)和序列特异性引物法(sequence specific primer,SSP),对2540名中国汉族人的(其中1168名受者,1372名供者)DNA标本进行HLA高分辨基因分型,并作统计学处理.结果 2540份样本中共检测到44种HLA-A等位基因,频率高于0.05的A*1101、A*2402、A*0201、A*0207、A*3303、A*0206、A*3001共占80.4%;81种HLA-B等位基因,频率高于0.05的B*4001、B*4601、B*5801、B*1302、B*5101共占43.0%;44种HLA-Cw等位基因,频率高于0.05的Cw*0702、Cw*0102、Cw*0304、Cw*0801、Cw*0602、Cw*0303、Cw*0302、Cw*0401共占80.3%;61种HLA-DRB1等位基因,频率高于0.05的DRB1*0901、DRB1*1501、DRB1*1202、DRB1*0803、DRB1*0701、DRB1*0405、DRB1*0301、DRB1*1101共占70.1%;22种HLA-DQB1等位基因,频率高于0.05的DQB1*0301、DQB1*0303、DQB1*0601、DQB1*0602、DQB1*0202、DQB1*0302、DQB1*0401、DQB1*0502、DQB1*0201共占87.4%.这5个位点均处于杂合子缺失状态,其中A、B、DRB1位点符合HardyWeinberg平衡(Hardy-Weinberg equi1ibrium,HWE)(P>0.05);Cw、DQB1位点偏离HWE(P<0.05);排除个别基因型观察值与期望值偏差较大外,这5个位点均符合HWE.在供-受者数据的比较中,HLA全相合(10/10)的比例仅22.4%;单个等位基因错配(9/10)的比例为24.6%;两个等位基因错配(8/10)的比例为26.3%.结论 中国汉族人群高分辨水平HLA-A、B、Cw、DRB1,DQB1等位基因频率及分布特点,对非亲缘造血干细胞移植供者检索有重要参考价值;并为中华骨髓库数据入库和利用提供遗传学依据.
Abstract:
Objective To analyze the allele frequencies and polymorphism of human leukocyte antigens (HLA) -A, B, Cw, DRB1 and DQB1 between donors-recipients on high-resolution typing; and to analyze the matching and mismatching proportion between donors and recipients. Methods HLA highresolution types were determined by sequence based typing (SBT), sequence specific oligonucleotide probe (SSOP) and sequence specific primer (SSP) on 2540 unrelated Chinese Han individuals including 1168 recipients and 1372 donors, then statistical analyses were carried out. Results Forty-four HLA-A alleles were detected, and among them the frequencies of A * 1101, A * 2402, A * 0201, A * 0207, A * 3303, A *0206 and A * 3001 exceeded 0.05, and accounted for 80.4%. Eighty-one HLA-B alleles were detected, and frequencies of B * 4001, B * 4601, B * 5801, B * 1302 and B * 5101 exceeded 0. 05, and accounted for 43. 0% of total. There were 44 HLA- Cw alleles, among them the frequencies of Cw * 0702, Cw * 0102,Cw * 0304, Cw * 0801, Cw * 0602, Cw * 0303, Cw * 0302 and Cw * 0401 exceeded 0.05, and were 80.3 %of total. There were 61 HLA-DRB1 alleles, the frequencies of DRB1 * 0901, DRB1 * 1501, DRB1 * 1202,DRB1 * 0803, DRB1 * 0701, DRB1 * 0405, DRB1 * 0301 and DRB1 * 1101 exceeded 0. 05, and were 70. 1% of total. Finally, 22 HLA-DQB1 alleles were detected, the frequencies of DQB1 * 0301, DQB1 *0303, DQB1 * 0601, DQB1 * 0602, DQB1 * 0202, DQB1 * 0302, DQB1 * 0401, DQB1 * 0502 and DQB1 *0201 exceeded 0. 05, and they were 87.4% of total. All the five loci were of heterozygote deficiency. The HLA-A, B and DRB1 loci conformed to Hardy-Weinberg equilibrium (HWE) (P>0. 05); but HLA-Cw and HLA-DQB1 loci did not (P<0.05). Except several particular genotypes, all the five loci conformed to HWE. After comparing data between donors and recipients, only 22.4% of recipients found HLA matched donors (10/10); 24. 6% of recipients found single HLA allele mismatched donors (9/10); 26. 3% of recipients had two HLA alleles mismatched donors (8/10). Conclusion The characteristics of allele frequencies and polymorphism of HLA-A, B, Cw, DRB1 and DQB1 on high-resolution typing in Chinese Han population is valuable for donor searching in unrelated hematopoietic stem cell transplantation, and it provides genetic basis for donor registry and usage of donor resource for Chinese Marrow Donor Program.  相似文献   

17.
Human leukocyte antigens (HLA) allele determination is becoming an increasingly important aspect in the field of transplantation as well as in the area of HLA association with a number of diseases. Through Lebanon's history, this country, situated at a crossroads between Europe, Asia and Africa, has been a host for various populations of different ethnicities. The aim of our study is to determine whether allele polymorphisms in the Lebanese population present a distinguishing feature. Although data on HLA phenotypic polymorphisms in Lebanon have been reported in the literature, our study is the first to examine frequencies of HLA polymorphisms in the country at the molecular level. Allele frequencies of the Lebanese population were analyzed and compared with those of other populations. HLA class II genotyping of DRB1* and DQB1* loci by PCR-sequence-specific primer (SSP) was performed on 191 unrelated Lebanese subjects of both sexes and of different regions and sects in Lebanon. The study revealed that DRB1*1101, DRB1*0401 and DRB1*0301 were the three most common DRB1* alleles observed (respective allele frequencies of 0.302, 0.164 and 0.096). In the DQB locus allele group, DQB1*0301 (allele frequency of 0.384) was highly predominant followed by the DQB1* 0501, DQB1*0201 and DQB1*0302 with respective allele frequencies of 0.199, 0.195 and 0.103. These results confirm previous serological studies and show the high prevalence of DRB1*1101 and DQB1*0301 in Lebanon, which could be explained by the high frequency of consanguineous marriages in the population. The presence of other common alleles is consistent with historical data showing that the Lebanese population is an admixture of various ethnicities.  相似文献   

18.
目的:了解白族人群人类白细胞抗原(Human leukocyte antigen,HLA) Ⅱ类基因-DRB1、-DQB1位点的遗传多态性.方法:采用PCR-SSP方法对124名云南大理洱源白族健康个体进行HLA-DRB1、-DQB1等位基因分型.结果:共检出21种DRB1等位基因,15种DQB1等位基因.其中主要的等位基因有DRB1*1202(26.61%)、DRB1*0901(13.89%)、DRB1*0803(9.92%)、DQB1*0301(31.45%)、DQB1*0601(10.08%)和DQB1*0401(8.06%).主要单倍型包括DRB1*1202-DQB1*0301(20.08%)和DRB1*0803-DQB1*0601(7.19%).结论:大理白族同其他10个民族群体HLA-DRB1、DQB1频率比较和聚类分析显示大理白族属于中国南方人群,但与其他群体存在一定的遗传距离,有着独特的HLA基因特性,对群体遗传及疾病相关性研究具有参考意义.  相似文献   

19.
In the present study, DNA typing for human leucocyte antigen (HLA)-DPB1, -DRB1, and -DQB1 was performed using polymerase chain reaction-sequence-based-typing (PCR-SBT) method on 94 randomly selected, healthy, unrelated individuals from the Ewenki ethnic population in Inner Mongolia Autonomous Region of China. A total of 64 alleles: 25 in DRB1, 19 in DQB1 and 20 in DPB1, were found. Among the 25 detected DRB1 alleles, DRB1*090102, DRB1*030101, DRB1*040101, DRB1*070101, and DRB1*120101/1206 were commonly observed, with frequencies of 16.0%, 13.3%, 10.1%, 7.4%, and 7.4%, respectively. The most predominant DQB1 allele was DQB1*030101/0309 with the frequency of 27.7%, followed by DQB1*0201/0202 (19.7%), DQB1*030302 (12.8%), DQB1*060101/060103 (6.4%), and DQB1*050201 (5.9%). Of the 20 detected DPB1 alleles, DPB1*020102 was the most frequent allele with the frequency of 25.5%. DPB1*0402 (21.3%), DPB1*0401 (20.2%), DPB1*0501 (10.6%) and DPB1*4101 (3.7%) were also very frequent alleles. The most frequent two-locus haplotypes observed in the Ewenki were: DRB1*030101-DQB1*0201/0202(10.7%), DRB1*090102-DQB1*03032(9.8%), DRB1*070101-DQB1*0201/0202 (5.5%), DRB1*070101-DQB1*030302 (5.2%) and DRB1*120101/1206-DQB1*030101/0309 (4.6%). The distribution of the HLA class II alleles and haplotypes frequencies as well as the dendrogram showed that the Ewenki population belongs to the northern group of Chinese.  相似文献   

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