Virulence and competitive ability in genetically diverse malaria infections

Explaining parasite virulence is a great challenge for evolutionary biology. Intuitively, parasites that depend on their hosts for their survival should be benign to their hosts, yet many parasites cause harm. One explanation for this is that within-host competition favors virulence, with more virulent strains having a competitive advantage in genetically diverse infections. This idea, which is well supported in theory, remains untested empirically. Here we provide evidence that within-host competition does indeed select for high parasite virulence. We examine the rodent malaria Plasmodium chabaudi in laboratory mice, a parasite-host system in which virulence can be easily monitored and competing strains quantified by using strain-specific real-time PCR. As predicted, we found a strong relationship between parasite virulence and competitive ability, so that more virulent strains have a competitive advantage in mixed-strain infections. In transmission experiments, we found that the strain composition of the parasite populations in mosquitoes was directly correlated with the composition of the blood-stage parasite population. Thus, the outcome of within-host competition determined relative transmission success. Our results imply that within-host competition is a major factor driving the evolution of virulence and can explain why many parasites harm their hosts.     

Experimental viral evolution to specific host MHC genotypes reveals fitness and virulence trade-offs in alternative MHC types

The unprecedented genetic diversity found at vertebrate MHC (major histocompatibility complex) loci influences susceptibility to most infectious and autoimmune diseases. The evolutionary explanation for how these polymorphisms are maintained has been controversial. One leading explanation, antagonistic coevolution (also known as the Red Queen), postulates a never-ending molecular arms race where pathogens evolve to evade immune recognition by common MHC alleles, which in turn provides a selective advantage to hosts carrying rare MHC alleles. This cyclical process leads to negative frequency-dependent selection and promotes MHC diversity if two conditions are met: (i) pathogen adaptation must produce trade-offs that result in pathogen fitness being higher in familiar (i.e., host MHC genotype adapted to) vs. unfamiliar host MHC genotypes; and (ii) this adaptation must produce correlated patterns of virulence (i.e., disease severity). Here we test these fundamental assumptions using an experimental evolutionary approach (serial passage). We demonstrate rapid adaptation and virulence evolution of a mouse-specific retrovirus to its mammalian host across multiple MHC genotypes. Critically, this adaptive response results in trade-offs (i.e., antagonistic pleiotropy) between host MHC genotypes; both viral fitness and virulence is substantially higher in familiar versus unfamiliar MHC genotypes. These data are unique in experimentally confirming the requisite conditions of the antagonistic coevolution model of MHC evolution and providing quantification of fitness effects for pathogen and host. These data help explain the unprecedented diversity of MHC genes, including how disease-causing alleles are maintained.     

Host-parasite interactions and the evolution of ploidy

Although the majority of animals and plants, including humans, are dominated by the diploid phase of their life cycle, extensive diversity in ploidy level exists among eukaryotes, with some groups being primarily haploid whereas others alternate between haploid and diploid phases. Previous theory has illuminated conditions that favor the evolution of increased or decreased ploidy but has shed little light on which species should be primarily haploid and which primarily diploid. Here, we report a discovery that emerged from host-parasite models in which ploidy levels were allowed to evolve: selection is more likely to favor diploidy in host species and haploidy in parasite species. Essentially, when parasites must evade a host's immune system or defense response, selection favors parasitic individuals that express a narrow array of antigens and elicitors, thus favoring haploid parasites over diploid parasites. Conversely, when hosts must recognize a parasite before mounting a defensive response, selection favors hosts with a broader arsenal of recognition molecules, thus favoring diploid hosts over haploid hosts. These results are consistent with the predominance of haploidy among parasitic protists.     

Infection with a plant virus modifies vector feeding behavior

Vector infection by some animal-infecting parasites results in altered feeding that enhances transmission. Modification of vector behavior is of broad adaptive significance, as parasite fitness relies on passage to a new host, and vector feeding is nearly always essential for transmission. Although several plant viruses infect their insect vectors, we have shown that vector infection by a plant virus alters feeding behavior. Here we show that infection with Tomato spotted wilt virus (TSWV), type member of the only plant-infecting genus in the Bunyaviridae, alters the feeding behavior of its thrips vector, Frankliniella occidentalis (Pergande). Male thrips infected with TSWV fed more than uninfected males, with the frequency of all feeding behaviors increasing by up to threefold, thus increasing the probability of virus inoculation. Importantly, infected males made almost three times more noningestion probes (probes in which they salivate, but leave cells largely undamaged) compared with uninfected males. A functional cell is requisite for TSWV infection and cell-to-cell movement; thus, this behavior is most likely to establish virus infection. Some animal-infecting members of the Bunyaviridae (La Crosse virus and Rift Valley fever virus) also cause increased biting rates in infected vectors. Concomitantly, these data support the hypothesis that capacity to modify vector feeding behavior is a conserved trait among plant- and animal-infecting members of the Bunyaviridae that evolved as a mechanism to enhance virus transmission. Our results underscore the evolutionary importance of vector behavioral modification to diverse parasites with host ranges spanning both plant and animal kingdoms.     

What is the role of small rodents in the transmission cycle of Trypanosoma cruzi and Trypanosoma evansi (Kinetoplastida Trypanosomatidae)? A study case in the Brazilian Pantanal

Determining the reservoir hosts for parasites is crucial for designing control measures, but it is often difficult to identify the role that each host species plays in maintaining the cycle of infection in the wild. One way to identify potential maintenance hosts is to estimate key parameters associated with transmission and pathogenicity. Here we assess the potential for three native rodent species of the Brazilian Pantanal (Clyomys laticeps, Thrichomys pachyurus and Oecomys mamorae) to act as reservoir or maintenance hosts of Trypanosoma evansi, an important parasite of domestic livestock. By analyzing blood parameters of naturally infected wild-caught rodents of these species, we compared their levels of parasitemia and anemia due to T. evansi infection with literature values for other host species infected by this parasite. We also analyzed levels of these blood parameters relative to infection by Trypanosoma cruzi, the causative agent of Chagas disease in humans, for which wild rodents are already thought to be important reservoir species. All three species showed low impacts of the two trypanosomes on their blood parameters compared to other species, suggesting that they experience a low virulence of trypanosome infection under natural conditions in the Pantanal and might act as maintenance hosts of trypanosome infections. The low parasitemia of trypanosome infections suggests that these rodents play a secondary role in the transmission cycle compared to other species, especially compared to the capybara (Hydrochaeris hydrochaeris) which also experiences low pathogenicity due to infection despite much higher levels of parasitemia.     

Parasite diversity and coinfection determine pathogen infection success and host fitness

While the importance of changes in host biodiversity for disease risk continues to gain empirical support, the influence of natural variation in parasite diversity on epidemiological outcomes remains largely overlooked. Here, we combined field infection data from 2,191 amphibian hosts representing 158 parasite assemblages with mechanistic experiments to evaluate the influence of parasite richness on both parasite transmission and host fitness. Using a guild of larval trematode parasites (six species) and an amphibian host, our experiments contrasted the effects of parasite richness vs. composition, observed vs. randomized assemblages, and additive vs. replacement designs. Consistent with the dilution effect hypothesis extended to intrahost diversity, increases in parasite richness reduced overall infection success, including infections by the most virulent parasite. However, the effects of parasite richness on host growth and survival were context dependent; pathology increased when parasites were administered additively, even when the presence of the most pathogenic species was held constant, but decreased when added species replaced or reduced virulent species, emphasizing the importance of community composition and assembly. These results were similar or stronger when community structures were weighted by their observed frequencies in nature. The field data also revealed the highly nested structure of parasite assemblages, with virulent species generally occupying basal positions, suggesting that increases in parasite richness and antagonism in nature will decrease virulent infections. Our findings emphasize the importance of parasite biodiversity and coinfection in affecting epidemiological responses and highlight the value of integrating research on biodiversity and community ecology for understanding infectious diseases.     

Wolbachia density and virulence attenuation after transfer into a novel host

The factors that control replication rate of the intracellular bacterium Wolbachia pipientis in its insect hosts are unknown and difficult to explore, given the complex interaction of symbiont and host genotypes. Using a strain of Wolbachia that is known to over-replicate and shorten the lifespan of its Drosophila melanogaster host, we have tracked the evolution of replication control in both somatic and reproductive tissues in a novel host/Wolbachia association. After transinfection (the transfer of a Wolbachia strain into a different species) of the over-replicating Wolbachia popcorn strain from D. melanogaster to Drosophila simulans, we demonstrated that initial high densities in the ovaries were in excess of what was required for perfect maternal transmission, and were likely causing reductions in reproductive fitness. Both densities and fitness costs associated with ovary infection rapidly declined in the generations after transinfection. The early death effect in D. simulans attenuated only slightly and was comparable to that induced in D. melanogaster. This study reveals a strong host involvement in Wolbachia replication rates, the independence of density control responses in different tissues, and the strength of natural selection acting on reproductive fitness.     

Evolution of host range in Coleosporium ipomoeae,a plant pathogen with multiple hosts

Plants and their pathogens coevolve locally. Previous investigations of one host–one pathogen systems have demonstrated that natural selection favors pathogen genotypes that are virulent on a broad range of host genotypes. In the present study, we examine a system consisting of one pathogen species that infects three host species in the morning glory genus Ipomoea. We show that many pathogen genotypes can infect two or three of the host species when tested on plants from nonlocal communities. By contrast, pathogen genotypes are highly host-specific, infecting only one host species, when tested on host species from the local community. This pattern indicates that within-community evolution narrows the host breadth of pathogen genotypes. Possible evolutionary mechanisms include direct selection for narrow host breadth due to costs of virulence and evolution of ipomoea resistance in the host species.Much of plant-pathogen coevolution is mediated by “gene-for-gene” (GFG) interactions. These interactions involve R genes in plants and corresponding virulence/avirulence genes in the pathogen (1). At a given pair of corresponding loci, a host may carry either a resistant (Res) or a susceptible (Sus) allele, or both, with Res typically being dominant. The pathogen may carry either a virulent (Vir) allele or an avirulent (Avr) allele. Infection results, unless at one pair of corresponding loci, the plant R locus has a Res allele and the pathogen has the Avr allele. Models of the evolution of GFG systems generally predict that generalist pathogens (those able to infect multiple host-resistance genotypes) will be favored by natural selection over highly specialized genotypes that can infect only one resistance genotype (2–6). Experimental analyses of pathogen host breadth in natural plant–pathogen systems are consistent with these expectations in that pathogen isolates are generally able to infect multiple host-resistance genotypes, especially in host populations with high levels of resistance (7–10).With very few exceptions (11, 12), the evolution of pathogen host range has been examined, both theoretically and empirically, for a single pathogen species interacting with a single host species. Many pathogens, however, are capable of infecting multiple host species. Predictions of evolutionary models based on a single evolving host species cannot be clearly extrapolated to this situation. Moreover, there are reasons to believe that, with multiple host species, selection for generalism may not be as prevalent. Maintaining infectivity on multiple hosts requires continued success in the coevolutionary arms race with more than one independently evolving host genome. The conditions under which this maintained infectivity can occur are likely more restrictive than with only one host, although this possibility has not been examined theoretically. In addition, selection to maintain infectivity on a particular host is likely weaker when the pathogen population can successfully reproduce on another host (see ref. 13 for an analogous argument with respect to partial resistance). Finally, costs associated with the ability to infect multiple host species (e.g., ref. 14) are likely greater than costs associated with the ability to infect multiple genotypes within the same host. All of these factors would tend to weaken selection for a broad host range and thus promote the evolution of specialist pathogen genotypes within populations.One approach to determining whether there is an evolutionary tendency for host breadth to be narrowed within populations is to compare pathogen host breadth in its local native community with host breadth on hosts from outside its native community (e.g., refs. 9 and 13). The latter constitutes an estimate of host breadth on host species with which the pathogen has presumably not recently coevolved and is also an estimate of host breadth for a pathogen strain that has recently immigrated into a new community. If evolutionary processes within local communities act to promote specialization, host breadth should be lower on hosts from the native community. In this report, we demonstrate that this pattern is exhibited for a host–pathogen system consisting of one pathogen and three host species.     

Leishmania model for microbial virulence: the relevance of parasite multiplication and pathoantigenicity

Leishmanial mechanisms of virulence have been proposed previously to involve two different groups of parasite molecules. One group consists of largely surface and secretory products, and the second group includes intracellular molecules, referred to as 'pathoantigens'. In the first group are invasive/evasive determinants, which protect not only parasites themselves, but also infected host cells from premature cytolysis. These determinants help intracellular amastigotes maintain continuous infection by growing at a slow rate in the parasitophorous vacuoles of host macrophages. This is illustrated in closed in vitro systems, e.g. Leishmania amazonensis in macrophage cell lines. Although individual macrophages may become heavily parasitized at times, massive destruction of macrophages has not been observed to result from uncontrolled parasite replication. This is thus unlikely to be the direct cause of virulence manifested as the clinical symptoms seen in human leishmaniasis. Of relevance is likely the second group of immunopathology-causing parasite 'pathoantigens'. These are highly conserved cytoplasmic proteins, which have been found to contain Leishmania-unique epitopes immunologically active in leishmaniasis. How these intracellular parasite antigens become exposed to the host immune system is accounted for by periodic cytolysis of the parasites during natural infection. This event is notable with a small number of parasites, even as they grow in an infected culture. The cytolysis of these parasites to release 'pathoantigens' may be inadvertent or medicated by specific mechanisms. Information on the pathoantigenic epitopes is limited. T-cell epitopes have long been recognized, albeit ill-defined, as important in eliciting CD4+ cell development along either the Th1 or Th2 pathway. Their operational mechanisms in suppressing or exacerbating cutaneous disease are still under intensive investigation. However, immune response to B-cell epitopes of such 'pathoantigens' is clearly futile and counterproductive. Their intracellular location within the parasites renders them inaccessible to the specific antibodies generated. One example is the Leishmania K39 epitope, against which antibodies are produced in exceedingly high titers, especially in Indian kala-azar. Here, we consider the hypothetical emergence of this pathoantigenicity and its potential contributions to the virulent phenotype in the form of immunopathology. Microbial virulence may be similarly explained in other emerging and re-emerging infectious diseases. Attenuation of microbial virulence may be achieved by genetic elimination of pathoantigenicity, thereby providing mutants potentially useful as avirulent live vaccines for immunoprophylasis of infectious diseases.     

Species formation by host shifting in avian malaria parasites

The malaria parasites (Apicomplexa: Haemosporida) of birds are believed to have diversified across the avian host phylogeny well after the origin of most major host lineages. Although many symbionts with direct transmission codiversify with their hosts, mechanisms of species formation in vector-borne parasites, including the role of host shifting, are poorly understood. Here, we examine the hosts of sister lineages in a phylogeny of 181 putative species of malaria parasites of New World terrestrial birds to determine the role of shifts between host taxa in the formation of new parasite species. We find that host shifting, often across host genera and families, is the rule. Sympatric speciation by host shifting would require local reproductive isolation as a prerequisite to divergent selection, but this mechanism is not supported by the generalized host-biting behavior of most vectors of avian malaria parasites. Instead, the geographic distribution of individual parasite lineages in diverse hosts suggests that species formation is predominantly allopatric and involves host expansion followed by local host–pathogen coevolution and secondary sympatry, resulting in local shifting of parasite lineages across hosts.Cospeciation of symbionts with their hosts has been recognized in parasites with strong vertical transmission (1, 2), viruses that spread by direct contact (3), and bacterial and viral symbionts passed from mother to offspring through the egg (4). Species formation in parasites that are transmitted between hosts by vectors is less well-understood (5, 6). Poor matching between the phylogenetic trees of vector-borne hemosporidian (malaria) parasites and their North American avian hosts suggests a predominance of host shifting compared with cospeciation (7) (reviewed in a broader context in ref. 8). Whether host shifting occurs primarily between closely related hosts and in geographic sympatry, and whether rates of host shifting followed by species formation are sufficient to explain the contemporary diversity of hemosporidian parasites, have not been determined.Many species of hemosporidian parasites have been described and named based primarily on the microscopic morphology of meronts and gametocytes in blood smears (9). The more recent discovery of hundreds of lineages based on DNA sequence variation in the mitochondrial cytochrome b gene (cyt b) (5, 10, 11) requires, however, a different species concept based on analysis of independent components of the genome (12–16). Recent estimates of the rate of molecular evolution in hemosporidian mitochondrial genes imply that the contemporary malaria parasites of vertebrates might have descended from a common ancestor within the past 20 (17) or 40 Ma (18) or, perhaps, a longer time period (19). Although an appropriate calibration for the rate of hemosporidian evolution remains unsettled (20, 21), host shifting almost certainly has been frequent, likely across great host distances at times, over the recent history of the group.Speciation in sympatry (i.e., in the absence of geographic barriers to gene flow through local host specialization) might follow host shifting if mating between parasites was assortative with respect to vertebrate host or if different hosts imposed strong disruptive selection on parasites (22). However, despite some documented feeding preferences (23–25), dipteran vectors of avian malaria parasites do not seem to be sufficiently specialized to isolate populations of parasites on different hosts (26–29). In addition, many parasite species and many parasite lineages distinguished by DNA sequence variation occur locally across broad ranges of hosts without apparent differentiation, at least in the mitochondrial cytochrome b gene (30–32) and several nuclear markers (12, 14). Alternatively, host shifting in one allopatric population of a parasite species could be followed, after sufficient host–pathogen coevolution and evolutionary differentiation to produce reproductive incompatibility, by secondary sympatry, thereby increasing local parasite diversity.Here, we examine recent nodes in an mtDNA-based phylogeny of New World hemosporidian parasites to determine the degree to which lineage formation is associated with host shifting. Although our phylogenetic reconstruction is based on a single mitochondrial gene (cyt b), phylogenies based on genes from the mitochondrial, nuclear, and apicoplast genomes are broadly consistent for the relatively recent nodes considered in this analysis (6, 12–14, 33–35). In addition, analyses of avian hemosporidian parasites based on multiple independent markers have distinguished mtDNA-defined lineages on the basis of significant linkage disequilibrium (13).We distinguish as species the lineages that differ in their mtDNA cytochrome b gene sequence (by as few as 2 nt) and, for the most part, occur in either different hosts in the same local area or the same or different hosts in different geographic areas (32, 36). In some cases, closely related lineages occur in the same host locally. Sister lineages in this analysis differ by an average of about 1% sequence divergence, although some sequences separated by as little as a single nucleotide can exhibit consistent host or geographic differences. Inference concerning the mode of species formation is based primarily on host and geographic distributions of these hemosporidian mtDNA lineages. However, the correspondence between lineages and reproductively isolated species is poorly resolved (13, 37, 38). Each node was designated as either sympatric or allopatric depending on whether the descendant lineages occurred on the same West Indian islands or in the same regions within larger continental areas. The status of closely related parasite lineages occurring locally in the same host species is ambiguous, but these lineages might reflect genetic variation within a parasite species.Previous analyses have suggested that host shifting, rather than codivergence, predominates species formation in the hemosporidian parasites of birds (5, 7). We find this most frequently to be the case in this analysis, and we discuss whether species formation by host shifting occurs primarily in sympatry or allopatry.     

Olfaction shapes host-parasite interactions in parasitic nematodes

Many parasitic nematodes actively seek out hosts in which to complete their lifecycles. Olfaction is thought to play an important role in the host-seeking process, with parasites following a chemical trail toward host-associated odors. However, little is known about the olfactory cues that attract parasitic nematodes to hosts or the behavioral responses these cues elicit. Moreover, what little is known focuses on easily obtainable laboratory hosts rather than on natural or other ecologically relevant hosts. Here we investigate the olfactory responses of six diverse species of entomopathogenic nematodes (EPNs) to seven ecologically relevant potential invertebrate hosts, including one known natural host and other potential hosts collected from the environment. We show that EPNs respond differentially to the odor blends emitted by live potential hosts as well as to individual host-derived odorants. In addition, we show that EPNs use the universal host cue CO(2) as well as host-specific odorants for host location, but the relative importance of CO(2) versus host-specific odorants varies for different parasite-host combinations and for different host-seeking behaviors. We also identified host-derived odorants by gas chromatography-mass spectrometry and found that many of these odorants stimulate host-seeking behaviors in a species-specific manner. Taken together, our results demonstrate that parasitic nematodes have evolved specialized olfactory systems that likely contribute to appropriate host selection.     

Local host specialization,host-switching,and dispersal shape the regional distributions of avian haemosporidian parasites

The drivers of regional parasite distributions are poorly understood, especially in comparison with those of free-living species. For vector-transmitted parasites, in particular, distributions might be influenced by host-switching and by parasite dispersal with primary hosts and vectors. We surveyed haemosporidian blood parasites (Plasmodium and Haemoproteus) of small land birds in eastern North America to characterize a regional parasite community. Distributions of parasite populations generally reflected distributions of their hosts across the region. However, when the interdependence between hosts and parasites was controlled statistically, local host assemblages were related to regional climatic gradients, but parasite assemblages were not. Moreover, because parasite assemblage similarity does not decrease with distance when controlling for host assemblages and climate, parasites evidently disperse readily within the distributions of their hosts. The degree of specialization on hosts varied in some parasite lineages over short periods and small geographic distances independently of the diversity of available hosts and potentially competing parasite lineages. Nonrandom spatial turnover was apparent in parasite lineages infecting one host species that was well-sampled within a single year across its range, plausibly reflecting localized adaptations of hosts and parasites. Overall, populations of avian hosts generally determine the geographic distributions of haemosporidian parasites. However, parasites are not dispersal-limited within their host distributions, and they may switch hosts readily.A regional community can be thought of as a set of species whose distributions partially overlap within a large geographic area (1, 2). The structure of the regional community (i.e., the relative abundances of species across space and the degree to which populations cooccur) is governed by local (e.g., interspecific competition) and regional (e.g., species diversification and dispersal) processes (3). Although regional communities include all species, parasites and pathogens are rarely considered integral community members (4). Indeed, impacts of parasites on community structure are frequently associated with epidemics—often following introductions to nonnative regions—that have driven naïve hosts to extinction or near extinction (5–7). However, parasites likely play a critical role in shaping regional community structure. Parasites can comprise a large proportion of the community biomass (8), form the majority of links in a community food web (9), and influence regional diversity by variously accelerating (10) or slowing (11) host diversification.Nevertheless, few studies have investigated the processes influencing the regional community structure of both parasites and their hosts. Parasite populations are integrated into community studies with difficulty, partly because these populations are distributed across multiple dimensions—space, host species, and host individuals (12)—and also because parasites are difficult to sample. Moreover, although parasites tend to specialize on one or a few host species, host-breadth may vary across a parasite’s range (13).Regional studies of birds and their dipteran-vectored haemosporidian (“malaria”) blood parasites (14–19) have shown that many parasites are heterogeneously distributed across space despite the availability of suitable hosts. Specialized associations between specific parasites and vectors (20–22) may drive such heterogeneity, although a recent analysis suggests that parasite–host compatibility is also important (23), and local coevolutionary relationships between parasites and their hosts likely influence geographic distributions of both host and parasite populations (11, 14, 15). However, most regional studies of these parasites have focused on individual host species (24–30).Here, we investigate the regional community structure of avian hosts and their haemosporidian parasites with respect to abiotic and biotic drivers of both host and parasite distributions. We surveyed local assemblages of avian haemosporidian parasites across eastern North America and related the distributions of individual parasite lineages to regional climate variation and to the distributions and abundances of their avian hosts. Community dissimilarities between sampling locations based on host assemblage structure (i.e., the relative abundances of potential host species) were positively correlated with those based on parasite assemblage structure, suggesting interdependence of host and parasite population distributions. However, when controlling statistically for that interdependence, local host assemblages responded strongly to environmental gradients and differed more with increasing geographic separation, whereas parasite assemblages did not. This finding suggests that haemosporidian parasites disperse readily across the distributions of their host populations in eastern North America, independently of difference in climate and geographic distance. The degree to which some parasite lineages specialized on particular hosts varied across years and locations, and the nonrandom parasite lineage turnover across the distribution of one well-sampled host species suggested that adaptations of hosts and parasites may also shape regional community structure. Despite evidence of pathogenicity of haemosporidian parasites in birds (31), correlations between host abundances and parasite relative abundances across the region were statistically indistinguishable from random. Taken together, these results suggest that the distributions of parasite populations largely follow the distributions of their hosts but that parasites readily switch hosts and may replace each other across the ranges of individual hosts, resulting in a complex and dynamic regional community.     

Imaging Techniques to Study Plant Virus Replication and Vertical Transmission

Plant viruses are obligate parasites that need to usurp plant cell metabolism in order to infect their hosts. Imaging techniques have been used for quite a long time to study plant virus–host interactions, making it possible to have major advances in the knowledge of plant virus infection cycles. The imaging techniques used to study plant–virus interactions have included light microscopy, confocal laser scanning microscopy, and scanning and transmission electron microscopies. Here, we review the use of these techniques in plant virology, illustrating recent advances in the area with examples from plant virus replication and virus plant-to-plant vertical transmission processes.     

Host defense reinforces host-parasite cospeciation

Cospeciation occurs when interacting groups, such as hosts and parasites, speciate in tandem, generating congruent phylogenies. Cospeciation can be a neutral process in which parasites speciate merely because they are isolated on diverging host islands. Adaptive evolution may also play a role, but this has seldom been tested. We explored the adaptive basis of cospeciation by using a model system consisting of feather lice (Columbicola) and their pigeon and dove hosts (Columbiformes). We reconstructed phylogenies for both groups by using nuclear and mitochondrial DNA sequences. Both phylogenies were well resolved and well supported. Comparing these phylogenies revealed significant cospeciation and correlated evolution of host and parasite body size. The match in body size suggested that adaptive constraints limit the range of hosts lice can use. We tested this hypothesis by transferring lice among hosts of different sizes to simulate host switches. The results of these experiments showed that lice cannot establish viable populations on novel hosts that differ in size from the native host. To determine why size matters, we measured three components of louse fitness: attachment, feeding, and escape from host defense (preening). Lice could remain attached to, and feed on, hosts varying in size by an order of magnitude. However, they could not escape from preening on novel hosts that differed in size from the native host. Overall, our results suggest that host defense reinforces cospeciation in birds and feather lice by preventing lice from switching between hosts of different sizes.     

From the Cover: Host and parasite diversity jointly control disease risk in complex communities

Host–parasite interactions are embedded within complex communities composed of multiple host species and a cryptic assemblage of other parasites. To date, however, surprisingly few studies have explored the joint effects of host and parasite richness on disease risk, despite growing interest in the diversity–disease relationship. Here, we combined field surveys and mechanistic experiments to test how transmission of the virulent trematode Ribeiroia ondatrae was affected by the diversity of both amphibian hosts and coinfecting parasites. Within natural wetlands, host and parasite species richness correlated positively, consistent with theoretical predictions. Among sites that supported Ribeiroia, however, host and parasite richness interacted to negatively affect Ribeiroia transmission between its snail and amphibian hosts, particularly in species-poor assemblages. In laboratory and outdoor experiments designed to decouple the relative contributions of host and parasite diversity, increases in host richness decreased Ribeiroia infection by 11–65%. Host richness also tended to decrease total infections by other parasite species (four of six instances), such that more diverse host assemblages exhibited ∼40% fewer infections overall. Importantly, parasite richness further reduced both per capita and total Ribeiroia infection by 15–20%, possibly owing to intrahost competition among coinfecting species. These findings provide evidence that parasitic and free-living diversity jointly regulate disease risk, help to resolve apparent contradictions in the diversity–disease relationship, and emphasize the challenges of integrating research on coinfection and host heterogeneity to develop a community ecology-based approach to infectious diseases.One of the most fundamental challenges facing contemporary disease ecology involves understanding host–parasite interactions within complex communities (1, 2). Whereas epidemiological research has historically focused on interactions between individual host and parasite species, growing evidence indicates that incorporating more realistic levels of diversity is essential for managing infectious diseases. Because most emerging parasites use or depend on multiple host species (3, 4), understanding transmission dynamics often demands detailed information on the host community (e.g., refs. 5 and 6). Concurrently, interactions among parasites are increasingly recognized in affecting disease outcomes (7, 8). Virtually all hosts in nature support a diverse assemblage of pathogenic and nonpathogenic microorganisms (9), which can interact both directly (e.g., competition for space or resources) or indirectly through host immunity (10, 11). Thus far, however, there have been few empirical efforts to unite these disparate lines of research and understand disease dynamics within multihost, multiparasite communities, in part owing to the challenges involved in understanding complex interactions operating across different scales (e.g., within and between hosts) (12, 13).A central question, therefore, concerns how host and parasite assemblages interact to determine transmission and disease severity within ecological communities. Thus far, two divergent perspectives have emerged regarding the relationship between biodiversity and parasitism. On one hand, recent interest has focused on the dilution effect hypothesis, which posits that increases in host diversity will reduce transmission or disease risk when accompanied by declines in the overall competence of the community (e.g., refs. 14 and 15). On the other hand, increases in host diversity are also hypothesized to promote parasite diversity by enhancing colonization opportunities and supporting a wider suite of parasite life cycles (host diversity begets parasite diversity hypothesis; ref. 16), such that host diversity and parasite diversity correlate positively (17, 18). Rather than contradicting each other, these seemingly divergent perspectives on the diversity–disease relationship emphasize differences in both terminology and ecological process. Parasite diversity is not equivalent to disease risk; given that many parasitic species cause relatively little harm to the host under normal conditions, disease risk is better equated to the abundance or prevalence of the most virulent parasites, rather than the overall richness of parasites per se (5, 19). Increases in parasite diversity may even function to reduce transmission if parasites are antagonistic with one another within hosts (19–22).Static patterns of parasite richness or species composition may also offer relatively little insight into transmission, or the capacity of a parasite to move locally between hosts (15, 23). Thus, even if more species-rich communities support higher parasite diversity owing to greater colonization opportunities, this provides limited information about how diversity per se affects parasite transmission within the community. Indeed, if parasite diversity alters transmission of the most virulent infections, it could function to amplify or mask any host-driven dilution effects, emphasizing the importance of field and experimental studies that explicitly measure transmission dynamics. These observations raise an intriguing question: If parasite diversity increases with host diversity and higher parasite richness can function to reduce disease risk, what are the individual and combined contributions of free-living and parasitic diversity to the diversity–disease relationship? Given the ubiquity of coinfection in natural host communities and the predominant tendency of diversity–disease research to focus on field-based correlations, studies that can disentangle the magnitude and relative contributions of differing components of community diversity—both free-living and parasitic—are increasingly essential.Here, we integrated field surveys and experimental manipulations of a multihost, multiparasite system to concurrently test the effects of host and parasite richness on transmission of a virulent parasite. By linking previously collected field data on host richness from 345 wetlands in California with new information on the full macroparasite communities of 1,686 hosts, we tested the influence of amphibian host and parasite richness on realized transmission of the pathogenic trematode Ribeiroia ondatrae, which causes mortality and malformations in amphibians (24–26). However, because we expected host diversity, parasite diversity, and parasite load to correlate in the field owing to links between colonization and diversity, we used an experimental approach first in the laboratory and then in seminatural outdoor mesocosms to decouple the unique effects of each form of diversity on infection by Ribeiroia and the total parasite community. While building upon previous efforts examining the individual effects of host and parasite richness in isolation (15, 19, 27–30), this study combines cross-sectional coinfection data, field-based measurements of transmission, and new experiments to explicitly examine the effects of host species richness on infection by an entire parasite assemblage, thereby mechanistically evaluating the joint effects of host and parasite diversity on disease risk.     

Parasite-driven pathogenesis in Trypanosoma brucei infections

Trypanosomes are protozoan parasites of medical and veterinary importance. It is well established that different species, subspecies and strains of trypanosome can cause very different disease in the mammalian host, exemplified by the two human-infective subspecies of Trypanosoma brucei that cause either acute or chronic disease. We are beginning to understand how the host response shapes the course of the disease and how genetic variation in the host can be a factor in disease severity, particularly in the mouse model, but until recently the role of parasite genetic variation that determines differential disease outcome has been a neglected area. This review will discuss the recent advances in this field, covering both our current knowledge of the T.?brucei genes involved and the approaches that are leading towards the identification of T.?brucei virulence genes. Finally, the potential for using parasite genotype variation to examine the evolutionary context of virulence will be discussed.     

Competitive release and facilitation of drug-resistant parasites after therapeutic chemotherapy in a rodent malaria model

Malaria infections frequently consist of mixtures of drug-resistant and drug-sensitive parasites. If crowding occurs, where clonal population densities are suppressed by the presence of coinfecting clones, removal of susceptible clones by drug treatment could allow resistant clones to expand into the newly vacated niche space within a host. Theoretical models show that, if such competitive release occurs, it can be a potent contributor to the strength of selection, greatly accelerating the rate at which resistance spreads in a population. A variety of correlational field data suggest that competitive release could occur in human malaria populations, but direct evidence cannot be ethically obtained from human infections. Here we show competitive release after pyrimethamine curative chemotherapy of acute infections of the rodent malaria Plasmodium chabaudi in laboratory mice. The expansion of resistant parasite numbers after treatment resulted in enhanced transmission-stage densities. After the elimination or near-elimination of sensitive parasites, the number of resistant parasites increased beyond that achieved when a competitor had never been present. Thus, a substantial competitive release occurred, markedly elevating the fitness advantages of drug resistance above those arising from survival alone. This finding may explain the rapid spread of drug resistance and the subsequently brief useful lifespans of some antimalarial drugs. In a second experiment, where subcurative chemotherapy was administered, the resistant clone was only partly released from competitive suppression and experienced a restriction in the size of its expansion after treatment. This finding raises the prospect of harnessing in-host ecology to slow the spread of drug resistance.     

Increased Detection of Sin Nombre Hantavirus RNA in Antibody-Positive Deer Mice from Montana,USA: Evidence of Male Bias in RNA Viremia

Hantaviruses are widespread emergent zoonotic agents that cause unapparent or limited disease in their rodent hosts, yet cause acute, often fatal pulmonary or renal infections in humans. Previous laboratory experiments with rodent reservoir hosts indicate that hantaviruses can be cleared from host blood early in the infection cycle, while sequestered long term in various host organs. Field studies of North American deer mice (Peromyscus maniculatus), the natural reservoir of Sin Nombre hantavirus, have shown that viral RNA can be transiently detected well past the early acute infection stage, but only in the minority of infected mice. Here, using a non-degenerate RT-PCR assay optimized for SNV strains known to circulate in Montana, USA, we show that viral RNA can be repeatedly detected on a monthly basis in up to 75% of antibody positive deer mice for periods up to 3–6 months. More importantly, our data show that antibody positive male deer mice are more than twice as likely to have detectable SNV RNA in their blood as antibody positive females, suggesting that SNV-infected male deer mice are more likely to shed virus and for longer periods of time.     

Does clutch size evolve in response to parasites and immunocompetence?

Parasites have been argued to influence clutch size evolution, but past work and theory has largely focused on within-species optimization solutions rather than clearly addressing among-species variation. The effects of parasites on clutch size variation among species can be complex, however, because different parasites can induce age-specific differences in mortality that can cause clutch size to evolve in different directions. We provide a conceptual argument that differences in immunocompetence among species should integrate differences in overall levels of parasite-induced mortality to which a species is exposed. We test this assumption and show that mortality caused by parasites is positively correlated with immunocompetence measured by cell-mediated measures. Under life history theory, clutch size should increase with increased adult mortality and decrease with increased juvenile mortality. Using immunocompetence as a general assay of parasite-induced mortality, we tested these predictions by using data for 25 species. We found that clutch size increased strongly with adult immunocompetence. In contrast, clutch size decreased weakly with increased juvenile immunocompetence. But, immunocompetence of juveniles may be constrained by selection on adults, and, when we controlled for adult immunocompetence, clutch size decreased with juvenile immunocompetence. Thus, immunocompetence seems to reflect evolutionary differences in parasite virulence experienced by species, and differences in age-specific parasite virulence appears to exert opposite selection on clutch size evolution.     

Vector-Virus Interactions and Transmission Dynamics of West Nile Virus

West Nile virus (WNV; Flavivirus; Flaviviridae) is the cause of the most widespread arthropod-borne viral disease in the world and the largest outbreak of neuroinvasive disease ever observed. Mosquito-borne outbreaks are influenced by intrinsic (e.g., vector and viral genetics, vector and host competence, vector life-history traits) and extrinsic (e.g., temperature, rainfall, human land use) factors that affect virus activity and mosquito biology in complex ways. The concept of vectorial capacity integrates these factors to address interactions of the virus with the arthropod host, leading to a clearer understanding of their complex interrelationships, how they affect transmission of vector-borne disease, and how they impact human health. Vertebrate factors including host competence, population dynamics, and immune status also affect transmission dynamics. The complexity of these interactions are further exacerbated by the fact that not only can divergent hosts differentially alter the virus, but the virus also can affect both vertebrate and invertebrate hosts in ways that significantly alter patterns of virus transmission. This chapter concentrates on selected components of the virus-vector-vertebrate interrelationship, focusing specifically on how interactions between vector, virus, and environment shape the patterns and intensity of WNV transmission.