2Apro is a multifunctional protein that regulates the stability, translation and replication of poliovirus RNA

Poliovirus 2A(pro) is required for the inhibition of host cell protein synthesis and efficient viral replication. We investigated the role of 2A(pro) in regulating viral RNA stability, translation and replication in HeLa S10 reactions. The protease activity of 2A(pro) or its polyprotein precursors, 2AB or P2, was required to increase the stability of viral RNA and prolong translation. Since other viral proteins were not required for the observed effects of 2A(pro), it is likely that a cellular protein(s) modified by 2A(pro) mediated these effects on stability and translation. In addition, the protease activity of 2A(pro) stimulated negative-strand initiation by approximately five-fold but had no effect on positive-strand initiation. The 2A(pro) stimulation of negative-strand synthesis was independent of its effect on stability and translation. These findings further extend the previously known functions of protein 2A(pro) to include its role in increasing RNA stability, prolonging translation and stimulating negative-strand synthesis.     

The linker domain of poly(rC) binding protein 2 is a major determinant in poliovirus cap-independent translation

Poliovirus, a member of the enterovirus genus in the family Picornaviridae, is the causative agent of poliomyelitis. Translation of the viral genome is mediated through an internal ribosomal entry site (IRES) encoded within the 5′ noncoding region (5′ NCR). IRES elements are highly structured RNA sequences that facilitate the recruitment of ribosomes for translation. Previous studies have shown that binding of a cellular protein, poly(rC) binding protein 2 (PCBP2), to a major stem-loop structure in the genomic 5′ NCR is necessary for the translation of picornaviruses containing type I IRES elements, including poliovirus, coxsackievirus, and human rhinovirus. PCBP1, an isoform that shares approximately 90% amino acid identity to PCBP2, cannot efficiently stimulate poliovirus IRES-mediated translation, most likely due to its reduced binding affinity to stem-loop IV within the poliovirus IRES. The primary differences between PCBP1 and PCBP2 are found in the so-called linker domain between the second and third K-homology (KH) domains of these proteins. We hypothesize that the linker region of PCBP2 augments binding to poliovirus stem-loop IV RNA. To test this hypothesis, we generated six PCBP1/PCBP2 chimeric proteins. The recombinant PCBP1/PCBP2 chimeric proteins were able to interact with poliovirus stem-loop I RNA and participate in protein-protein interactions. We demonstrated that the PCBP1/PCBP2 chimeric proteins with the PCBP2 linker, but not with the PCBP1 linker, were able to interact with poliovirus stem-loop IV RNA, and could subsequently stimulate poliovirus IRES-mediated translation. In addition, using a monoclonal anti-PCBP2 antibody (directed against the PCBP2 linker domain) in mobility shift assays, we showed that the PCBP2 linker domain modulates binding to poliovirus stem-loop IV RNA via a mechanism that is not inhibited by the antibody.     

Structures required for poly(A) tail-independent translation overlap with, but are distinct from, cap-independent translation and RNA replication signals at the 3' end of Tobacco necrosis virus RNA

Tobacco necrosis necrovirus (TNV) RNA lacks both a 5' cap and a poly(A) tail but is translated efficiently, owing in part to a Barley yellow dwarf virus (BYDV)-like cap-independent translation element (BTE) in its 3' untranslated region (UTR). Here, we identify sequence downstream of the BTE that is necessary for poly(A) tail-independent translation in vivo by using RNA encoding a luciferase reporter gene flanked by viral UTRs. Deletions and point mutations caused loss of translation that was restored by adding a poly(A) tail, and not by adding a 5' cap. The two 3'-proximal stem-loops in the viral genome contribute to poly(A) tail-independent translation, as well as RNA replication. For all necroviruses, we predict a conserved 3' UTR secondary structure that includes the BTE at one end of a long helical axis and the stem-loops required for poly(A) tail-independent translation and RNA replication at the other end. This work shows that a viral genome can harbor distinct cap- and poly(A) tail-mimic sequences in the 3' UTR.     

Host-dependent roles of the viral 5′ untranslated region (UTR) in RNA stabilization and cap-independent translational enhancement mediated by the 3′ UTR of Red clover necrotic mosaic virus RNA1

The genome of Red clover necrotic mosaic virus (RCNMV) consists of RNA1 and RNA2, both lacking a cap structure and a poly(A)tail. RNA1 has a translational enhancer element (3′TE-DR1) in the 3′ untranslated region (UTR). In this study, we analyzed the roles of 5′ and 3′ UTRs of RNA1 in 3′TE-DR1-mediated cap-independent translation in cowpea and tobacco BY-2 protoplasts using a dual-luciferase (Luc) reporter assay system. Most mutations introduced into RNA1 5′ UTR in reporter Luc mRNA abolished or greatly reduced cap-independent translation in BY-2 protoplasts, whereas those mutations had no or much milder effects if any on translational activity in cowpea protoplasts. Our results suggest that a stem-loop structure predicted in the 5′ proximal region of RNA1 plays important roles in both translation and RNA stability. We also show that 3′TE-DR1-mediated cap-independent translation relies on a ribosome-scanning mechanism in both protoplasts.     

The Flvr-encoded murine oligoadenylate synthetase 1b (Oas1b) suppresses 2-5A synthesis in intact cells

Resistance to flavivirus-induced disease in mice is conferred by the autosomal gene Flv, identified as 2′-5′ oligoadenylate synthetase 1b (Oas1b). Resistant mice express a full-length Oas1b protein while susceptible mice express the truncated Oas1btr. In this study, Oas1b was shown to be an inactive synthetase. Although the Oas/RNase L pathway was previously shown to have an antiviral role during flavivirus infections, Oas1b protein inhibited Oas1a in vitro synthetase activity in a dose-dependent manner and reduced 2-5A production in vivo in response to poly(I:C). These findings suggest that negative regulation of 2-5A by inactive Oas1 proteins may fine tune the RNase L response that if not tightly controlled could cause significant damage in cells. The results also indicate that flavivirus resistance conferred by Oas1b is not mediated by 2-5A. Instead, Oas1b inhibits flavivirus replication by an alternative mechanism that overrides the proviral effect of reducing 2-5A accumulation and RNase L activation.     

The large form of human 2′,5′-Oligoadenylate Synthetase (OAS3) exerts antiviral effect against Chikungunya virus

Chikungunya virus (CHIKV) becomes one of the most important mosquito-borne alphavirus in the medical field. CHIKV is highly sensitive to antiviral activity of Type-I interferons (IFN-α/β). Here, we investigated the role of IFN-induced 2′,5′-Oligoadenylate Synthetase (OAS) family in innate immunity to CHIKV. We established inducible human epithelial HeLa cell lines expressing either the large form of human OAS, OAS3, or the genetic variant OAS3-R844X which is predicted to lack about 20% of the OAS3 protein from the carboxy terminus. HeLa cells respond to ectopic OAS3 expression by efficiently inhibiting CHIKV growth. The characteristic of the antiviral effect was a blockade in early stages of virus replication. Thus, OAS3 pathway may represent a novel antialphaviral mechanism by which IFN-α/β controls CHIKV growth. HeLa cells expressing the truncated form of OAS3 were less resistant to CHIKV infection, raising the question on the involvement of OAS3 genetic polymorphism in human susceptibility to alphavirus infection.     

鹅流感病毒2/96-H5N1亚型毒株RNA1-3及RNA5节段核苷酸全序测定

目的　明确广东鹅流感病毒２９６Ｈ５ Ｎ１ 亚型毒株ＲＮＡ１３ 和ＲＮＡ５ 节段核苷酸全序列及其所编码蛋白的氨基酸序列,以及这些基因节段与香港禽流感病毒１５６９７Ｈ５ Ｎ１ 亚型毒株相应节段间的关系。方法　病毒粒ＲＮＡ经逆转录合成ｃＤＮＡ,经聚合酶链反应（ＰＣＲ） 扩增,产物纯化,采用双脱氧链末端终止法进行核苷酸序列测定。结果　广东鹅流感病毒２９６Ｈ５ Ｎ１ 亚型毒株ＲＮＡ１３ 和ＲＮＡ５ 节段长度分别为２３４１,２ ３４１ ,２ ２３３ 和１５６５ 个核苷酸。它们分别编码ＰＢ２（ 含７５９ 个氨基酸）,ＰＢ１（ 含７５７个氨基酸） ,ＰＡ（ 含７１６ 个氨基酸） 和ＮＰ蛋白（ 含４９８ 个核苷酸） 。这些蛋白与香港禽流感病毒１５６９７Ｈ５ Ｎ１ 亚型毒株相应蛋白氨基酸序列的同源性分别为９６－４％ ,９７－２％ ,９７－３ ％ 和９７－０％ 。结论　本毒株ＲＮＡ１３ 和ＲＮＡ５ 节段长度分别为２ ３４１,２ ３４１,２ ２３３ 和１ ５６５ 个核苷酸,它们与香港１５６９７Ｈ５ Ｎ１ 亚型毒株间存在着差异     

Polyhedral Oligomeric Silsesquioxane‐ and Fullerene‐End‐Capped Poly(ε‐caprolactone)

Novel fullerene‐ and polyhedral oligomeric silsesquioxane‐ (POSS) double end‐capped poly(ε‐caprolactone) (PCL) were successfully synthesized. The crystallization behavior of the fullerene‐ and POSS‐ double end‐capped PCL and the effect of aggregation of the POSS and fullerene moieties on the crystallization of PCL were thoroughly studied. The aggregation of the fullerene moieties has much larger confinement effect on the crystallization of PCL than that of POSS. The successful incorporation of two nano‐sized objects, that is, fullerene and POSS, into the PCL matrix may introduce their merits, so that PCL can attain multi‐functional properties.

     

Synthesis of hydroxytelechelic ε‐caprolactone/poly(ethylene terephthalate) co‐oligomers, 1

In the presence of ethylene glycol, poly(ethylene terephthalate) (PET) undergoes chain scissions with the formation of α,ω‐hydroxyl oligomers, through classical transesterification by alcoholysis. ε‐Caprolactone was subsequently added on the hydroxyl end groups of PET oligomers by ring‐opening polymerization at different molar ratios of ε‐caprolactone to PET oligomers. The chemical structure of the products was investigated by size exclusion chromatography, ¹H NMR spectroscopy, and differential scanning calorimetry. A large majority of these products are soluble in common organic solvents. The thermal and ¹H NMR analyses reveal that the transesterification between base units of PET oligomers and ε‐caprolactone during the synthesis is always present whatever the reaction conditions. This phenomenon leads to copolymers having thermal properties different from those of PET. However, some co‐oligomers present the interest of keeping properties close to those of PET. The main purpose of this study was the synthesis of PET co‐oligomers that are soluble in some organic solvents that would make their use easier, and so that they can be used further as hard segment precursers for polycondensation reactions.

Ring‐opening polymerization of ε‐caprolactone onto hydroxytelechelic oligomers of PET.     

Ternary Thermosetting Blends of Epoxy Resin,Poly(ethylene oxide) and Poly(ε‐caprolactone)

Summary: The ternary thermosetting blends composed of epoxy resin, poly(ethylene oxide) (PEO) and poly(ε‐caprolactone) (PCL) were prepared via in situ polymerization of epoxy monomers in the presence of the two crystalline polymers, PEO and PCL. DSC results showed that the binary blends of epoxy with PEO (and/or PCL) are fully miscible in the entire composition in the amorphous state. FTIR indicates that there were interchain specific interactions between the crosslinked epoxy and the linear polymers in the binary blends and the hydrogen bonding interactions between epoxy and PCL are much weaker than those between epoxy and PEO. The difference in the strength of interchain specific interactions gives rise to the competitive hydrogen bonding interactions in the ternary blends of epoxy, PEO and PCL, which were evidenced by the results of FTIR. The results of optical microscopy and DSC showed that in the ternary blends PCL component separated out with inclusion of PEO. The formation of the specific phase structures is ascribed to the competitive interchain specific interactions among the crosslinked epoxy, PEO and PCL.

Phase boundary diagram of epoxy, PEO and PCL ternary blends.     

Activation of glycogen synthase kinase-3 inhibits protein phosphatase-2A and the underlying mechanisms

The activity of protein phosphatase-2A (PP-2A) is significantly suppressed in the brain of Alzheimer's disease (AD) patients, but the mechanism is not understood. Here, we found an in vivo association of glycogen synthase kinase 3β (GSK-3β) with inhibitor-2 of PP-2A (I₂^PP-2A). The activation of GSK-3 resulted in accumulation of I₂^PP-2A with concomitant suppression of PP-2A activity and increases of tau phosphorylation in HEK293, N2a and PC12 cells, while inhibition of GSK-3 caused decreases of I₂^PP-2A with increased PP-2A activity and decreased tau phosphorylation. A positive correlation between GSK-3β and I₂^PP-2A (R = 0.9158) and a negative correlation between GSK-3β and PP-2A (R = −0.9166) were detected. GSK-3 activation did not affect I₂^PP-2A mRNA level, while it increased the mRNA level of a heterogeneous ribonucleoprotein A18 (hnRNP A18). The activation of GSK-3 increased the expression and the activity of proteasome system. It suggests that activation of GSK-3 inhibits PP-2A through up-regulation of I₂^PP-2A with hnRNP A18-involved mechanism.     

Banded Spherulitic Morphology in Blends of Poly (propylene fumarate) and Poly(ϵ‐caprolactone) and Interaction with MC3T3‐E1 Cells

The thermal properties, morphological development, crystallization behavior, and miscibility of semicrystalline PCL and its 25, 50, and 75 wt% blends with amorphous PPF in spin‐coated thin films crystallized at various crystallization temperatures (T_c) from 25 to 52 °C are investigated. The surface roughness of PPF/PCL (?_PCL = 75%) films increases with increasing T_c and consequently the adsorption of serum proteins is also increased. No significant variance is found in surface hydrophilicity or in mouse MC3T3‐E1 cell attachment, spreading, and proliferation on PPF/PCL (?_PCL = 75%) films crystallized isothermally at 25, 37, and 45 °C, because of low ridge height, nonuniformity in structures, and PPF surface segregation.     

A Y-shaped RNA structure in the 3′ untranslated region together with the trans-activator and core promoter of Red clover necrotic mosaic virus RNA2 is required for its negative-strand RNA synthesis

Red clover necrotic mosaic virus (RCNMV) is a positive-strand RNA virus with a bipartite genome. RNA1 encodes N-terminally overlapping replication proteins, p27 and p88. RNA2 is replicated efficiently by the replication proteins supplied in trans, whereas RNA1 needs p88 preferentially in cis for its replication. cis-Acting elements required for RNA2 replication have been mapped to the 3′ terminal stem-loop structure conserved between RNA1 and RNA2, and to the protein-coding region including the trans-activator. Here, we have identified a Y-shaped RNA structure with three-way RNA junctions predicted in the 3′ untranslated region of RNA2 as a novel element required for negative-strand synthesis using an in vitro translation/replication system. We also show that, in addition to the 3′ terminal core promoter, several RNA elements including the trans-activator are also required for negative-strand synthesis. Functional roles and structural requirements of these cis-acting elements in RCNMV RNA replication are discussed.     

Structure and Properties of Poly(ε‐caprolactone) Networks with Modulated Water Uptake

Summary: A PCL macromonomer was obtained by the reaction of PCL diol with methacrylic anhydride. The effective incorporation of the polymerizable end groups was assessed by FT‐IR and ¹H NMR spectroscopy. PCL networks were then prepared by photopolymerization of the PCL macromonomer. Furthermore, the macromonomer was copolymerized with HEA, with the aim of tailoring the hydrophilicity of the system. A set of hydrophilic semicrystalline copolymer networks were obtained. The phase microstructure of the new system and the network architecture was investigated by DSC, IR, DMS, TG, dielectric spectroscopy and water sorption studies. The presence of the hydrophilic units in the system prevented PCL crystallization on cooling; yet there was no effect on the glass transition process. The copolymer networks showed microphase separation and the α relaxation of the HEA units moved to lower temperatures as the amount of PCL in the system increased.

Ideal structure, compatible with the experimental results, for the hydrophilized poly(ε‐caprolactone) networks with modulated water uptake.     

Synthesis and Characterisation of Poly[oligo(ε‐caprolactone)L‐malate‐graft‐poly(L‐lactide)]

Graft copolyesters with a PCL backbone and PLLA side chains were successfully prepared in three steps avoiding transesterification. First ε‐caprolactone was polymerised with 1,6‐hexane diol as initiator to obtain hydroxytelechelic oligo(ε‐caprolactone)s. These diols were then subjected—in the second step—to polycondensation with L ‐malic acid yielding in linear poly[oligo(ε‐caprolactone)L ‐malate] having secondary hydroxyl functions in the side chain. For both reactions scandium triflate Sc(OTf)₃ was used as a catalyst. In the third step various amounts of L ‐lactide were grafted from the polymer backbone using Zn(oct)₂ as catalyst. The successful reaction was confirmed by NMR and SEC (size exclusion chromatography) analysis. Further the thermal properties of the graft copolymers with different graft lengths were determined via differential scanning calorimetry.

     

Synthesis and Characterization of Block Copolymers of ε‐Caprolactone and DL‐Lactide Initiated by Ethylene Glycol or Poly(ethylene glycol)

Biodegradable copolymers were prepared by ring‐opening polymerization of sequentially added ε‐caprolactone and DL ‐lactide in the presence of ethylene glycol or poly(ethylene glycol), using zinc metal as catalyst. Polymerization was performed in bulk and yielded block copolymers with predetermined PEG/PCL/PLA segments. The obtained polymers were characterized by ¹H NMR, SEC, IR, DSC, TGA, and X‐ray diffraction. Data showed that the copolymers preserved the excellent thermal behavior inherent to PCL. The crystallinity of PLA‐containing copolymers was reduced with respect to PCL homopolymer. The presence of both hydrophilic PEG and fast degrading PLA blocks should improve the biocompatibility and biodegradability of the materials, which are of interest for applications as substrate in drug delivery or as scaffolding in tissue engineering.

Block copolymerization of ε‐caprolactone and DL ‐lactide initiated by dihydroxyl PEG.     

Synthesis and Characterization of Functionalized Crosslinkable Poly(ε‐caprolactone)

Summary: A new and rather simple method to obtain randomly crosslinked PCL is reported. PCL was previously functionalized through radical grafting of MA and GMA in the melt, using a Brabender‐like apparatus. GMA was added in order to obtain higher grafting efficiency. The structure of PCL‐g‐MAGMA was elucidated by ¹H NMR spectroscopy, and the content of grafted MA was determined by FT‐IR spectroscopy. PCL‐g‐MAGMA was successively crosslinked through reaction with HMDI. The degree of crosslinking was determined by solvent extractions with chloroform. Thermal and dynamic mechanical analysis and tensile tests were performed on plain PCL, on PCL‐g‐MAGMA and on crosslinked PCL samples.

Schematic representation of PCL‐g‐MAGMA structure.