Mutation frequencies of EXT1 and EXT2 in 43 Japanese families with hereditary multiple exostoses

Hereditary multiple exostoses (EXT) is an autosomal dominant bone disease characterized by the formation of cartilage‐capped prominences. EXT is genetically heterogeneous with at least four chromosomal loci. Among the four loci, the exostosis type 1 gene (EXT1) and type 2 gene (EXT2) have been cloned. Previous studies have shown that disease‐type‐specific frequency of mutations is different among various ethnic populations. To determine those frequencies in the Japanese, we conducted a large‐scale mutation screening on both genes. In 23 of 43 Japanese families examined, we found 21 different mutations, of which 18 are novel. Seventeen (40%) of the 23 families had a mutation in EXT1 and six (14%) had a mutation in EXT2, suggesting that the former mutations are more frequent than the latter in Japanese EXT families. Of the 17 families with EXT1 mutations, 13 had those causing premature termination of the EXT1 protein and four showed missense mutations, whereas five of the six families with EXT2 mutations had those causing premature termination and one showed missense mutation. Interestingly, all four EXT1 missense mutations occurred in an arginine residue at codon 340 (R340) that is known as a critical site for expression of heparan sulfate glycosaminoglycans, suggesting that the region encompassing the arginine residue may play an important role in the function of the EXT1 protein. These results expand our knowledge of the ethnic difference of EXT and the structure‐function relationship of the EXT genes. © Wiley‐Liss. Inc.     

山西汉族遗传性多发性骨软骨瘤家系EXT1及EXT2基因突变研究

目的 对山西一个汉族遗传性多发性骨软骨瘤家系的EXT1和EXT2基因的全部外显子序列进行分析,以寻找致病突变.方法 用PCR扩增先证者EXT1和EXT2基因的全部外显子,将PCR产物送直接测序分析.结果 发现EXT1基因2种同义突变(P477P、E587E)、3种内含子突变(c.1537-48A＞G、c.1721 +203 A＞G、c.1722-103 C＞G).EXT2基因共发现5种内含子突变(c.-29-148 A＞T、c.1080-18 T＞A、c.1336-93 C＞T、c.1526-166 C＞T、c.1526-195C＞T).其中,EXT1 P477P、EXT1 E587E和EXT2 c.1080-18 T＞A为多发性骨软骨瘤突变数据库已收录的多态位点,其余7个位点尚未见报道.结论 对该家系EXT1、EXT2基因全部外显子的测序分析未发现明确的致病突变,该家系遗传性多发性骨软骨瘤的发生是否由除EXT1、EXT2外的其它EXT相关基因引起尚需进一步的连锁定位分析.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

应用变性高效液相色谱技术检测三个遗传性多发性外生骨疣家系的EXT1与EXT2基因突变

目的建立一种应用变性高效液相色谱(denaturing high performance liquid chromatograph,DHPLC)技术检测遗传性多发性外生骨疣(hereditary multiple exostosis,EXT)基因突变的新方法,并研究3个EXT家系的基因突变情况。方法扩增EXT致病基因的所有外显子区及部分内含子与外显子交界区,联合连锁分析、DHPLC筛查及测序的方法进行分析。结果3个EXT家系中,共检测到两处已知EXT2基因的剪接位点突变IVS2 1G>A、IVS7 1G>T,一处28C>A变异和一处EXT1基因的IVS4 66G>A变异。结论EXT2基因的2个剪接位点突变分别是引起相应EXT家系的致病原因,应用DHPLC技术检测遗传性疾病基因变突是一种自动化、高通量、灵敏、快速且简便经济的好方法。     

Venous malformation may be a feature of EXT1-related hereditary multiple exostoses: A report of two unrelated probands

Hereditary multiple exostoses (HME), also known as hereditary multiple osteochondroma (HMO), is an autosomal dominant disorder caused by pathogenic variants in exostosin-1 or -2 (EXT1 or EXT2). It is characterized by the formation of multiple benign growing osteochondromas (exostoses) that most commonly affect the long bones; however, it may also occur throughout the body. Although many of these lesions are clinically asymptomatic, some can lead to chronic pain and skeletal deformities and interfere with adjacent neurovascular structures. Here, we report two unrelated probands that presented with a clinical and molecular diagnosis of HME with venous malformation, a clinical feature not previously reported in individuals with HME.     

Germline mutations in the EXT1 and EXT2 genes in Korean patients with hereditary multiple exostoses

Hereditary multiple exostoses (EXT) is an autosomal dominantly inherited disease characterized by the formation of cartilage-capped prominences (exostoses) that develop from the juxtaepiphyseal regions of the long bones. Recently, EXT1 and EXT2 genes were cloned and germline mutations of EXT1 and EXT2 were identified in EXT families. In this study, we performed a mutational analysis of EXT1 and EXT2 genes in eight unrelated Korean EXT families by polymerase chain reaction (PCR)-single strand conformation polymorphism (SSCP) analysis followed by direct DNA sequencing. As a result, we were able to identify one family (SNU-OC3) with the EXT1 mutation and another family (SNU-OC15) with the EXT2 mutation. The EXT1 mutation was a 10-bp deletion at the 3′ end of exon 5 (CTAATTTAGg) including the splice site of this exon. The EXT2 mutation identified in the SNU-OC15 family was a missense mutation at codon 85 of exon 2 (T_GC ? C_GC), resulting in an amino acid change from cysteine to arginine. This missense mutation cosegregated with the disease phenotype in this family, suggesting that it is the disease-causing mutation. These two mutations identified in EXT1 and EXT2 are novel ones.     

EXT2基因IVS2+1G>A突变致遗传性多发性外生性骨疣

目的　确定一个遗传性外生性骨疣家系的致病基因。方法　应用基因组扫描方法 ,利用 8、11和 19号染色体上的微卫星标记对该家系进行连锁分析 ,确定候选基因 ,然后对候选基因的编码区及外显子与内含子交界处进行测序分析寻找突变 ,并行逆转录 - PCR扩增 m RNA加以证实。结果　该家系致病基因被定位在 11号染色体的 EXT2基因区 ,在 EXT2基因中检测到 1个 IVS2 1G>A(5 36 1G>A)突变 ,该突变与疾病共分离。逆转录 - PCR证实 ,该突变导致编码区的第 316～ 5 36位共 2 2 1个碱基的缺失 ,使 10 6位密码子至 178位密码子及紧随的两个核苷酸的缺失 ,造成移码 ,形成 12 5个氨基酸的截短蛋白。结论　EXT2基因的 IVS2 1G>A突变是导致这个家系发生外生性骨疣的原因。     

EXT2基因突变引起的多发性骨软骨瘤的遗传学及表型分析

目的: 对2个多发性骨软骨瘤(multiple exostoses)小家系中的先证者进行致病基因 EXT1 和 EXT2 编码序列的突变检测,寻找致病性突变。 方法: 应用PCR扩增 EXT1 和 EXT2 基因的编码区及外显子-内含子交界区,对产物进行直接测序。在50个正常对照中进行新发现突变位点的PCR测序分析,以排除多态性。结果: 家系1的先证者检测到1个 EXT2 基因的已知突变c.668G>C(p.Arg223Pro),该错义突变使精氨酸变成脯氨酸;家系2的先证者于 EXT2 基因中检测到1个国际数据库中尚未报道的新突变c.950delT(p.Phe317SerfsX15),患者父母均未检测到此突变,故此突变为一个de novo突变。该突变引起开放阅读框架移位,提前引入终止密码子,导致蛋白质分子的截断,即部分exostosin结构域和全部glyco-transf-64结构域的丢失。结论: 本文发现的 EXT2 基因的新生及已知突变是引起本研究中多发性骨软骨瘤患者发病的分子机制,可用于临床的分子诊断。     

一个遗传性多发性骨软骨瘤家系的基因突变检测

目的 确定一个遗传性多发性骨软骨瘤(hereditary multiple exostoses,HME)家系的致病基因.方法 应用与EXT1、EXT2紧密连锁的短串联重复序列(short tandem repeat,STR)对该家系进行连锁分析,确定候选基因,然后对候选基因的编码区及外显子与内含子交界处进行PCR-测序法突变分析.结果 该家系致病基因被定位在EXT2基因区,测序发现EXT2基因536G>A无义突变,该突变位于EXT2基因第3外显子,导致编码第180位氨基酸的密码子成为终止密码,突变与疾病共分离,其余外显子未发现突变.另发现1例外显不全.结论 EXT2基因536G>A突变是导致这个家系发生骨软骨瘤的原因.     

Genotype-phenotype correlation in hereditary multiple exostoses

Hereditary multiple exostoses (HME) is a genetically heterogeneous autosomal dominant disorder characterised by the development of bony protuberances mainly located on the long bones. Three HME loci have been mapped to chromosomes 8q24 (EXT1), 11p11-13 (EXT2), and 19p (EXT3). The EXT1 and EXT2 genes encode glycosyltransferases involved in biosynthesis of heparan sulphate proteoglycans. Here we report on a clinical survey and mutation analysis of 42 HME French families and show that EXT1 and EXT2 accounted for more than 90% of HME cases in our series. Among them, 27/42 cases were accounted for by EXT1 (64%, four nonsense, 19 frameshift, three missense, and one splice site mutations) and 9/42 cases were accounted for by EXT2 (21%, four nonsense, two frameshift, two missense, and one splice site mutation). Overall, 31/36 mutations were expected to cause loss of protein function (86%). The most severe forms of the disease and malignant transformation of exostoses to chondrosarcomas were associated with EXT1 mutations. These findings provide the first genotype-phenotype correlation in HME and will, it is hoped, facilitate the clinical management of these patients.


Keywords: hereditary multiple exostoses; EXT1; EXT2; chondrosarcoma     

Two-color multiplex ligation-dependent probe amplification: detecting genomic rearrangements in hereditary multiple exostoses

Genomic deletions and duplications play an important role in the etiology of human disease. Versatile tests are required to detect these rearrangements, both in research and diagnostic settings. Multiplex ligation-dependent probe amplification (MLPA) is such a technique, allowing the rapid and precise quantification of up to 40 sequences within a nucleic acid sample using a one-tube assay. Current MLPA probe design, however, involves time-consuming and costly steps for probe generation. To bypass these limitations we set out to use chemically synthesized oligonucleotide probes only. The inherent limitations of this approach are related to oligonucleotide length, and thus the number of probes that can be combined in one assay is also limited. This problem was tackled by designing a two-color assay, combining two sets of probes, each amplified by primers labeled with a different fluorophore. In this way we successfully combined 28 probes in a single reaction. The assay designed was used to screen for the presence of deletions and duplications in patients with hereditary multiple exostoses (HME). Screening 18 patients without detectable point mutations in the EXT1 and EXT2 genes revealed five cases with deletions of one or more exons: four in EXT1 and one in EXT2. Our results show that a two-color MLPA assay using only synthetic oligonucleotides provides an attractive alternative for probe design. The approach is especially suited for cases in which the number of patients to be tested is limited, making it financially unattractive to invest in cloning.     

EXT1基因1633-26(C→A)突变可能致多发性外生性骨疣

目的研究1例散发多发性外生性骨疣患者的基因突变情况，确定其致病基因。方法采用聚合酶链反应结合DNA直接测序法检测EXT1以及EXT2基因的突变热点区域；并应用错配引物PCR扩增引入酶切位点结合限制性片段长度多态性方法检测和鉴定突变。结果经测序证实在患者EXT1基因的第7内含子3’剪接位点上游26bp处发现一杂合突变，此杂合突变不存在于其表型正常的父母双亲中，是一个新生突变；错配引物扩增与限制性片段长度多态性分析结果表明在150名家系外正常对照者中没有此突变。结论EXT1基因1633-26（C→A）突变可能是导致这个患者发生多发性外生性骨疣的致病突变。     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.     

遗传性多发性骨软骨瘤的基因诊断及产前诊断

目的 研究家族遗传性骨软骨瘤病(hereditary multiple exostoses,HME)的致病基因及产前诊断.方法 应用连锁分析方法对一个HME家系EXT1、EXT2和EXT3基因进行分析.致病基因定位后,用PCR-测序法进行了突变分析.结果 在该家系中EXT2基因第6外显子发生1个新的无义突变(c.1006C>T),该突变导致第336位编码谷氨酰胺的密码子CAA变为终止密码子TAA(Gln336X).根据上述结果配合遗传咨询进行了产前诊断,结果显示胎儿正常.结论 在家族遗传性骨软骨瘤家系中发现一新的EXT2基因突变,并应用于产前诊断.