Feature Extraction from a Signature Based on the Turning Angle Function for the Classification of Breast Tumors

Malignant breast tumors and benign masses appear in mammograms with different shape characteristics: the former usually have rough, spiculated, or microlobulated contours, whereas the latter commonly have smooth, round, oval, or macrolobulated contours. Features that characterize shape roughness and complexity can assist in distinguishing between malignant tumors and benign masses. Signatures of contours may be used to analyze their shapes. We propose to use a signature based on the turning angle function of contours of breast masses to derive features that capture the characteristics of shape roughness as described above. We propose methods to derive an index of the presence of convex regions (XR ( TA )), an index of the presence of concave regions (VR ( TA )), an index of convexity (CX ( TA )), and two measures of fractal dimension (FD ( TA ) and FDd ( TA )) from the turning angle function. The methods were tested with a set of 111 contours of 65 benign masses and 46 malignant tumors with different parameters. The best classification accuracies in discriminating between benign masses and malignant tumors, obtained for XR ( TA ), VR ( TA ), CX ( TA ), FD ( TA ), and FDd ( TA ) in terms of the area under the receiver operating characteristics curve, were 0.92, 0.92, 0.93, 0.93, and, 0.92, respectively.     

Boundary modelling and shape analysis methods for classification of mammographic masses

The problem of computer-aided classification of benign and malignant breast masses using shape features is addressed. The aim of the study is to look at the exceptions in shapes of masses such as circumscribed malignant tumours and spiculated benign masses which are difficult to classify correctly using common shape analysis methods. The proposed methods of shape analysis treat the object's boundary in terms of local details. The boundaries of masses analysed using the proposed methods were manually drawn on mammographic images by an expert radiologist (JELD). A boundary segmentation method is used to separate major portions of the boundary and to label them as concave or convex segments. To analyse the shape information localised in each segment, features are computed through an iterative procedure for polygonal modelling of the mass boundaries. Features are based on the concavity fraction of a mass boundary and the degree of narrowness of spicules as characterised by a spiculation index. Two features comprising spiculation index (SI) and fractional concavity (f_cc) developed in the present study when used in combination with the global shape feature of compactness resulted in a benign/malignant classification accuracy of 82%, with an area (A_z) of 0.79 under the receiver operating characteristics (ROC) curve with a database of the boundaries of 28 benign masses and 26 malignant tumours. SI alone resulted in a classification accuracy of 80% with A_z of 0.82. The combination of all the three features achieved 91% accuracy of circumscribed versus spiculated classification of masses based on shape.     

Development of tolerant features for characterization of masses in mammograms

In this paper, four new features for the analysis of breast masses are presented. These features were designed to be insensitive to the exact shape of the contour of the masses, so that an approximate contour, such as the one extracted via an automated segmentation algorithm, can be employed in their computation. Two of the features, Sp_SI and Sp_GO, measure the degree of spiculation of a mass and its likelihood of being spiculated. One of these features, Sp_GO, is a measure of the relative gradient orientation of pixels that correspond to possible spicules. The other feature, Sp_SI, is based on a comparison of mutual information measures between selected components of the mammographic images. The last two features, Fz₁ and Fz₂, measure the local fuzziness of the mass margins based on points defined automatically. The features were tested for characterization (i.e. discrimination between circumscribed and spiculated masses) and diagnosis (i.e. discrimination between benign and malignant masses) of breast masses using a set of 319 masses and three different classifiers. In the characterization experiments the features produced a result of approximately 89% correct classification. In the diagnosis experiments, the performance achieved was approximately 81% of correct classification.     

Fractal Analysis of Contours of Breast Masses in Mammograms

Fractal analysis has been shown to be useful in image processing for characterizing shape and gray-scale complexity. Breast masses present shape and gray-scale characteristics that vary between benign masses and malignant tumors in mammograms. Limited studies have been conducted on the application of fractal analysis specifically for classifying breast masses based on shape. The fractal dimension of the contour of a mass may be computed either directly from the 2-dimensional (2D) contour or from a 1-dimensional (1D) signature derived from the contour. We present a study of four methods to compute the fractal dimension of the contours of breast masses, including the ruler method and the box counting method applied to 1D and 2D representations of the contours. The methods were applied to a data set of 111 contours of breast masses. Receiver operating characteristics (ROC) analysis was performed to assess and compare the performance of fractal dimension and four previously developed shape factors in the classification of breast masses as benign or malignant. Fractal dimension was observed to complement the other shape factors, in particular fractional concavity, in the representation of the complexity of the contours. The combination of fractal dimension with fractional concavity yielded the highest area (A ( z )) under the ROC curve of 0.93; the two measures, on their own, resulted in A ( z ) values of 0.89 and 0.88, respectively.     

超声造影在肝实质性肿块诊断及鉴别中的临床价值

目的 探讨超声造影在肝实质性肿块诊断及鉴别中的临床价值。方法 选取2016年7月~2017年8月我院检查的疑似肝实质性肿块患者90例,所有患者均给予超声造影及彩色多普勒超声检查,对比两种方法在肝实质性肿块中的检出率,诊断肝实质性肿块中恶性肿瘤、良性肿瘤及良性病变的灵敏度及特异度。结果 90例患者中,共检出110个肝实质性肿块,恶性肿瘤71个,其中为肝转移癌16个、原发性肝癌55个;良性肿瘤为肝血管瘤25个;良性病变14个,其中为肝孤立性坏死结节4个、肝局灶性结节增生10个。超声造影在恶性肿瘤、良性肿瘤及良性病变检出率高于彩色多普勒超声检查,差异有统计学意义（P＜0.05）。超声造影在诊断肝实质性肿块中灵敏度及特异度均高于彩色多普勒超声检查,但差异无统计学意义（P＞0.05）。结论 超声造影与彩色多普勒超声检查均可诊断及鉴别肝实质性肿块,但超声造影在诊断及鉴别中优势更加明显,肿块检出率及临床应用价值较高,可为临床诊断提供影像学参考。     

计算机辅助系统在诊断乳腺良恶性肿瘤中的应用

目的:探讨计算机辅助诊断系统在良恶性肿瘤检测与特征提取基础上的分类对于乳腺肿瘤的诊断价值。方法:回顾性分析乳腺超声检查发现肿瘤且经过病理学证实的617例患者影像资料,采用手工提取的方式得到乳腺超声图像的感兴趣区域及病灶轮廓,再利用方向梯度直方图（HOG）、局部二值模式（LBP）和灰度共生矩阵（GLCM）3个特征进行乳腺肿瘤的良恶性病变真假阳性检测;最后用受试者操作特征曲线（ROC）分别分析每个特征对于两类病变判别的诊断性能和应用所有特征集合的分类诊断性能。结果:多特征融合方法的各项诊断效能及ROC曲线下面积（AUC）值均优于单特征LBP、HOG、GLCM（P值均<0.05）。与人工诊断相比,多特征融合的敏感性无显著差异,但特异度显著升高达98.57%（Z值=2.25, P<0.05）,同时AUC值为0.985,显著优于人工诊断的0.910（Z值=1.99, P<0.05）。结论:计算机辅助系统乳腺超声肿瘤良恶性检测的算法是有效的,能够对乳腺癌鉴别诊断提供有益的参考。     

Computerized Determination Scheme for Histological Classification of Breast Mass Using Objective Features Corresponding to Clinicians’ Subjective Impressions on Ultrasonographic Images

It is often difficult for clinicians to decide correctly on either biopsy or follow-up for breast lesions with masses on ultrasonographic images. The purpose of this study was to develop a computerized determination scheme for histological classification of breast mass by using objective features corresponding to clinicians’ subjective impressions for image features on ultrasonographic images. Our database consisted of 363 breast ultrasonographic images obtained from 363 patients. It included 150 malignant (103 invasive and 47 noninvasive carcinomas) and 213 benign masses (87 cysts and 126 fibroadenomas). We divided our database into 65 images (28 malignant and 37 benign masses) for training set and 298 images (122 malignant and 176 benign masses) for test set. An observer study was first conducted to obtain clinicians’ subjective impression for nine image features on mass. In the proposed method, location and area of the mass were determined by an experienced clinician. We defined some feature extraction methods for each of nine image features. For each image feature, we selected the feature extraction method with the highest correlation coefficient between the objective features and the average clinicians’ subjective impressions. We employed multiple discriminant analysis with the nine objective features for determining histological classification of mass. The classification accuracies of the proposed method were 88.4 % (76/86) for invasive carcinomas, 80.6 % (29/36) for noninvasive carcinomas, 86.0 % (92/107) for fibroadenomas, and 84.1 % (58/69) for cysts, respectively. The proposed method would be useful in the differential diagnosis of breast masses on ultrasonographic images as diagnosis aid.     

Classification of breast masses in ultrasonic B scans using Nakagami and K distributions

Classification of breast masses in greyscale ultrasound images is undertaken using a multiparameter approach. Five parameters reflecting the non-Rayleigh nature of the backscattered echo were used. These parameters, based mostly on the Nakagami and K distributions, were extracted from the envelope of the echoes at the site, boundary, spiculated region and shadow of the mass. They were combined to create a linear discriminant. The performance of this discriminant for the classification of breast masses was studied using a data set consisting of 70 benign and 29 malignant cases. The Az value for the discriminant was 0.96 +/- 0.02, showing great promise in the classification of masses into benign and malignant ones. The discriminant was combined with the level of suspicion values of the radiologist leading to an Az value of 0.97 +/- 0.014. The parameters used here can be calculated with minimal clinical intervention, so the method proposed here may therefore be easily implemented in an automated fashion. These results also support the recent reports suggesting that ultrasound may help as an adjunct to mammography in breast cancer diagnostics to enhance the classification of breast masses.     

Effect of Pixel Resolution on Texture Features of Breast Masses in Mammograms

The effect of pixel resolution on texture features computed using the gray-level co-occurrence matrix (GLCM) was analyzed in the task of discriminating mammographic breast lesions as benign masses or malignant tumors. Regions in mammograms related to 111 breast masses, including 65 benign masses and 46 malignant tumors, were analyzed at pixel sizes of 50, 100, 200, 400, 600, 800, and 1,000 μm. Classification experiments using each texture feature individually provided accuracy, in terms of the area under the receiver operating characteristics curve (AUC), of up to 0.72. Using the Bayesian classifier and the leave-one-out method, the AUC obtained was in the range 0.73 to 0.75 for the pixel resolutions of 200 to 800 μm, with 14 GLCM-based texture features using adaptive ribbons of pixels around the boundaries of the masses. Texture features computed using the ribbons resulted in higher classification accuracy than the same features computed using the corresponding regions within the mass boundaries. The t test was applied to AUC values obtained using 100 repetitions of random splitting of the texture features from the ribbons of masses into the training and testing sets. The texture features computed with the pixel size of 200 μm provided the highest average AUC with statistically highly significant differences as compared to all of the other pixel sizes tested, except 100 μm.     

Classification of breast masses in mammograms using genetic programming and feature selection

Mammography is a widely used screening tool and is the gold standard for the early detection of breast cancer. The classification of breast masses into the benign and malignant categories is an important problem in the area of computer-aided diagnosis of breast cancer. A small dataset of 57 breast mass images, each with 22 features computed, was used in this investigation; the same dataset has been previously used in other studies. The extracted features relate to edge-sharpness, shape, and texture. The novelty of this paper is the adaptation and application of the classification technique called genetic programming (GP), which possesses feature selection implicitly. To refine the pool of features available to the GP classifier, we used feature-selection methods, including the introduction of three statistical measures—Student’s t test, Kolmogorov–Smirnov test, and Kullback–Leibler divergence. Both the training and test accuracies obtained were high: above 99.5% for training and typically above 98% for test experiments. A leave-one-out experiment showed 97.3% success in the classification of benign masses and 95.0% success in the classification of malignant tumors. A shape feature known as fractional concavity was found to be the most important among those tested, since it was automatically selected by the GP classifier in almost every experiment.     

Identification of masses in digital mammogram using gray level co-occurrence matrices

Digital mammogram has become the most effective technique for early breast cancer detection modality. Digital mammogram takes an electronic image of the breast and stores it directly in a computer. The aim of this study is to develop an automated system for assisting the analysis of digital mammograms. Computer image processing techniques will be applied to enhance images and this is followed by segmentation of the region of interest (ROI). Subsequently, the textural features will be extracted from the ROI. The texture features will be used to classify the ROIs as either masses or non-masses. In this study normal breast images and breast image with masses used as the standard input to the proposed system are taken from Mammographic Image Analysis Society (MIAS) digital mammogram database. In MIAS database, masses are grouped into either spiculated, circumscribed or ill-defined. Additional information includes location of masses centres and radius of masses. The extraction of the textural features of ROIs is done by using gray level co-occurrence matrices (GLCM) which is constructed at four different directions for each ROI. The results show that the GLCM at 0o, 45o, 90o and 135o with a block size of 8X8 give significant texture information to identify between masses and non-masses tissues. Analysis of GLCM properties i.e. contrast, energy and homogeneity resulted in receiver operating characteristics (ROC) curve area of Az = 0.84 for Otsu's method, 0.82 for thresholding method and Az = 0.7 for K-mean clustering. ROC curve area of 0.8-0.9 is rated as good results. The authors' proposed method contains no complicated algorithm. The detection is based on a decision tree with five criterions to be analysed. This simplicity leads to less computational time. Thus, this approach is suitable for automated real-time breast cancer diagnosis system.     

Use of border information in the classification of mammographic masses

We are developing a new method to characterize the margin of a mammographic mass lesion to improve the classification of benign and malignant masses. Towards this goal, we designed features that measure the degree of sharpness and microlobulation of mass margins. We calculated these features in a border region of the mass defined as a thin band along the mass contour. The importance of these features in the classification of benign and malignant masses was studied in relation to existing features used for mammographic mass detection. Features were divided into three groups, each representing a different mass segment: the interior region of a mass, the border and the outer area. The interior and the outer area of a mass were characterized using contrast and spiculation measures. Classification was done in two steps. First, features representing each of the three mass segments were merged into a neural network classifier resulting in a single regional classification score for each segment. Secondly, a classifier combined the three single scores into a final output to discriminate between benign and malignant lesions. We compared the classification performance of each regional classifier and the combined classifier on a data set of 1076 biopsy proved masses (590 malignant and 486 benign) from 481 women included in the Digital Database for Screening Mammography. Receiver operating characteristic (ROC) analysis was used to evaluate the accuracy of the classifiers. The area under the ROC curve (A(z)) was 0.69 for the interior mass segment, 0.76 for the border segment and 0.75 for the outer mass segment. The performance of the combined classifier was 0.81 for image-based and 0.83 for case-based evaluation. These results show that the combination of information from different mass segments is an effective approach for computer-aided characterization of mammographic masses. An advantage of this approach is that it allows the assessment of the contribution of regions rather than individual features. Results suggest that the border and the outer areas contained the most valuable information for discrimination between benign and malignant masses.     

Texture‐based and diffusion‐weighted discrimination of parotid gland lesions on MR images at 3.0 Tesla

The purpose of this study was to evaluate whether texture‐based analysis of standard MRI sequences and diffusion‐weighted imaging can help in the discrimination of parotid gland masses. The MR images of 38 patients with a biopsy‐ or surgery‐proven parotid gland mass were retrospectively analyzed. All patients were examined on the same 3.0 Tesla MR unit, with one standard protocol. The ADC (apparent diffusion coefficient) values of the tumors were measured with three regions of interest (ROIs) covering the entire tumor. Texture‐based analysis was performed with the texture analysis software MaZda (version 4.7), with ROI measurements covering the entire tumor in three slices. COC (co‐occurrence matrix), RUN (run‐length matrix), GRA (gradient), ARM (auto‐regressive model), and WAV (wavelet transform) features were calculated for all ROIs. Three subsets of 10 texture features each were used for a linear discriminant analysis (LDA) in combination with k nearest neighbor classification (k‐NN). Using histology as a standard of reference, benign tumors, including subtypes, and malignant tumors were compared with regard to ADC and texture‐based values, with a one‐way analysis of variance with post‐hoc t‐tests. Significant differences were found in the mean ADC values between Warthin tumors and pleomorphic adenomas, as well as between Warthin tumors and benign lesions. Contrast‐enhanced T1‐weighted images contained the most relevant textural information for the discrimination between benign and malignant parotid masses, and also for the discrimination between pleomorphic adenomas and Warthin tumors. STIR images contained the least relevant texture features, particularly for the discrimination between pleomorphic adenomas and Warthin tumors. Texture analysis proved to differentiate benign from malignant lesions, as well as pleomorphic adenomas from Warthin tumors, based on standard T_1w sequences (without and with contrast). Of all benign parotid masses, Warthin tumors had significantly lower ADC values than the other entities. Copyright © 2013 John Wiley & Sons, Ltd.     

基于深度学习结合解剖学注意力机制的肺结节良恶性分类

肺结节作为肺癌的初期表现,及时的发现和准确的良恶性诊断对于疾病的治疗具有重要的意义。为了提高肺部CT图像中肺结节良恶性的诊断率,提出一种基于3D ResNet的卷积神经网络,并通过加入解剖学注意力模块有效地提高了肺结节良恶性的分类精度。此外,该方法通过自动分割以获取注意力机制所需的感兴趣区域,实现整个流程的全自动化。解剖学注意力的添加能更好地捕捉图像中的局部纹理信息,进一步提取对于肺结节良恶性诊断有用的特征。本文方法在LIDC-IDRI数据集上进行验证。实验结果表明与传统的3D ResNet及其他现有的方法相比,本文方法在分类精度上有显著的提高,在独立测试集上的最终分类的AUC达到0.973,准确率为0.940。由此可见,本文方法能在辅助医生对肺结节的诊断中起到重要作用。     

Computer-Aided Diagnosis Scheme for Distinguishing Between Benign and Malignant Masses in Breast DCE-MRI

Our purpose in this study was to develop a computer-aided diagnosis (CAD) scheme for distinguishing between benign and malignant breast masses in dynamic contrast material-enhanced magnetic resonance imaging (DCE-MRI). Our database consisted 90 DCE-MRI examinations, each of which contained four sequential phase images; this database included 28 benign masses and 62 malignant masses. In our CAD scheme, we first determined 11 objective features of masses by taking into account the image features and the dynamic changes in signal intensity that experienced radiologists commonly use for describing masses in DCE-MRI. Quadratic discriminant analysis (QDA) was employed to distinguish between benign and malignant masses. As the input of the QDA, a combination of four objective features was determined among the 11 objective features according to a stepwise method. These objective features were as follows: (i) the change in signal intensity from 2 to 5 min; (ii) the change in signal intensity from 0 to 2 min; (iii) the irregularity of the shape; and (iv) the smoothness of the margin. Using this approach, the classification accuracy, sensitivity, and specificity were shown to be 85.6 % (77 of 90), 87.1 % (54 of 62), and 82.1 % (23 of 28), respectively. Furthermore, the positive and negative predictive values were 91.5 % (54 of 59) and 74.2 % (23 of 31), respectively. Our CAD scheme therefore exhibits high classification accuracy and is useful in the differential diagnosis of masses in DCE-MRI images.     

超声造影在附件区肿块良恶性鉴别诊断中的应用

目的：探讨目前国内外在应用超声造影鉴别诊断附件区肿块良恶性方面的研究进展。方法：查阅PubMed、CNKI数据库中关于超声造影鉴别诊断附件区肿块良恶性的研究文献,进行归纳总结分析。结果：超声造影能够显示肿瘤的异常血管和血供模式,附件区良恶性肿瘤间血供丰富程度、充盈方式及时间--强度曲线定量参数等具显著差异,较早期的恶性肿瘤即可显示恶性造影特征。结论：超声造影能够较好的鉴别诊断附件区肿块的良恶性,并可诊断早期的恶性肿瘤,值得进一步深入研究和推广应用。     

Computer-Aided Diagnosis Scheme for Distinguishing Between Benign and Malignant Masses on Breast DCE-MRI Images Using Deep Convolutional Neural Network with Bayesian Optimization

Although magnetic resonance imaging (MRI) has a higher sensitivity of early breast cancer than mammography, the specificity is lower. The purpose of this study was to develop a computer-aided diagnosis (CAD) scheme for distinguishing between benign and malignant breast masses on dynamic contrast material-enhanced MRI (DCE-MRI) by using a deep convolutional neural network (DCNN) with Bayesian optimization. Our database consisted of 56 DCE-MRI examinations for 56 patients, each of which contained five sequential phase images. It included 26 benign and 30 malignant masses. In this study, we first determined a baseline DCNN model from well-known DCNN models in terms of classification performance. The optimum architecture of the DCNN model was determined by changing the hyperparameters of the baseline DCNN model such as the number of layers, the filter size, and the number of filters using Bayesian optimization. As the input of the proposed DCNN model, rectangular regions of interest which include an entire mass were selected from each of DCE-MRI images by an experienced radiologist. Three-fold cross validation method was used for training and testing of the proposed DCNN model. The classification accuracy, the sensitivity, the specificity, the positive predictive value, and the negative predictive value were 92.9% (52/56), 93.3% (28/30), 92.3% (24/26), 93.3% (28/30), and 92.3% (24/26), respectively. These results were substantially greater than those with the conventional method based on handcrafted features and a classifier. The proposed DCNN model achieved high classification performance and would be useful in differential diagnoses of masses in breast DCE-MRI images as a diagnostic aid.     

Analysis of temporal changes of mammographic features: computer-aided classification of malignant and benign breast masses

A new classification scheme was developed to classify mammographic masses as malignant and benign by using interval change information. The masses on both the current and the prior mammograms were automatically segmented using an active contour method. From each mass, 20 run length statistics (RLS) texture features, 3 speculation features, and 12 morphological features were extracted. Additionally, 20 difference RLS features were obtained by subtracting the prior RLS features from the corresponding current RLS features. The feature space consisted of the current RLS features, the difference RLS features, the current and prior speculation features, and the current and prior mass sizes. Stepwise feature selection and linear discriminant analysis classification were used to select and merge the most useful features. A leave-one-case-out resampling scheme was used to train and test the classifier using 140 temporal image pairs (85 malignant, 55 benign) obtained from 57 biopsy-proven masses (33 malignant, 24 benign) in 56 patients. An average of 10 features were selected from the 56 training subsets: 4 difference RLS features, 4 RLS features, and 1 speculation feature from the current image, and 1 speculation feature from the prior, were most often chosen. The classifier achieved an average training Az of 0.92 and a test Az of 0.88. For comparison, a classifier was trained and tested using features extracted from the 120 current single images. This classifier achieved an average training Az of 0.90 and a test Az of 0.82. The information on the prior image significantly (p = 0.015) improved the accuracy for classification of the masses.     

用于乳腺肿瘤分级诊断超声图像增强的算法

为提高乳腺肿瘤分级诊断的能力,提出一种基于超声信号用于乳腺肿瘤分级诊断的图像增强算法。通过分析良性和不同恶性程度肿瘤的超声图像的特征差异,提出了一种将灰度的动态变换方法和利用局部标准差及熵特征相结合的办法,对图像对比度进行增强处理,增强了乳腺超声图像的细节,提高了图像质量。该算法可对良性、恶性肿瘤等不同超声图像进行增强处理,使得图像之间差异更加明显,为临床医生分级诊断提供更加清晰的图像,具有一定的实际应用价值。     

Usefulness of Texture Analysis for Computerized Classification of Breast Lesions on Mammograms

This work presents the usefulness of texture features in the classification of breast lesions in 5,518 images of regions of interest, which were obtained from the Digital Database for Screening Mammography that included microcalcifications, masses, and normal cases. Sixteen texture features were used, i.e., 13 were based on the spatial gray-level dependence matrix and 3 on the wavelet transform. The nonparametric K-NN classifier was used in the classification stage. The results obtained from receiver operating characteristic analysis indicated that the texture features can be used for separating normal regions and lesions with masses and microcalcifications, yielding the area under the curve (AUC) values of 0.957 and 0.859, respectively. However, the texture features were not very effective for distinguishing between malignant and benign lesions because the AUC was 0.617 for masses and 0.607 for microcalcifications. The study showed that the texture features can be used for the detection of suspicious regions in mammograms.