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山茱萸药材及其混伪品的ITS/ITS2序列鉴定研究
引用本文:侯典云,宋经元,姚辉,韩建萍,庞晓慧,石林春,王笑尘,陈士林.山茱萸药材及其混伪品的ITS/ITS2序列鉴定研究[J].中国天然药物,2013(2):121-127.
作者姓名:侯典云  宋经元  姚辉  韩建萍  庞晓慧  石林春  王笑尘  陈士林
作者单位:[1]中国医学科学院药用植物研究所,北京100193 [2]河南科技大学农学院,洛阳471003 [3]中国中医科学院中药研究所,北京100700 [4]南阳市山茱萸研究所,南阳474550
基金项目:国家高技术研究发展计划(863计划)(No.2012AA021602)、中央高校基本科研业务费专项资金项目mo.2012C02)和国家自然科学基金(No.81073001)资助
摘    要:利用DNA条形码技术准确快速鉴定山茱萸药材及其混伪品。方法:提取山莱萸及其混伪品的基因组DNA,利用PCR技术扩增它们的ITS序列。所得序列经双向测序后用CodonCode AlignerV3.5.4软件进行拼接和质量评估,用MEGAV5.0计算种内、种间的遗传距离,构建NJ(邻接)树鉴定山茱萸药材及其混伪品。结果:山茱萸药材的ITS序列长度均为659bp,种内变异较小,平均K2P遗传距离为O.005,远小于其与混伪品的种间平均K2P遗传距离0.357。不同来源的山茱萸药材ITS2序列无变异,长度均为250bp,其与混伪品的种间平均K2P遗传距离为0.571。ITS/ITS2序列的NJ系统聚类树和BLAST比对结果均可明显区分山茱萸药材及其混伪品,表现出良好的单系性。结论:ITS/ITS2序列可准确有效鉴定山茱萸药材,为临床安全用药奠定了基础,也为其它药材的分子鉴定提供了新的思路。

关 键 词:山茱萸  ITS  ITS2  DNA条形码  分子鉴定

Molecular identification of Corni Fructus and its adulterants by ITS/ITS2 sequences
HOU Dian-Yun,SONG Jing-Yuan,YAO Hui,HAN Jian-Ping,PANG Xiao-Hui,SHI Lin-Chun,WANG Xiao-Chen,CHEN Shi-Lin.Molecular identification of Corni Fructus and its adulterants by ITS/ITS2 sequences[J].Chinese JOurnal of Natural Medicines,2013(2):121-127.
Authors:HOU Dian-Yun  SONG Jing-Yuan  YAO Hui  HAN Jian-Ping  PANG Xiao-Hui  SHI Lin-Chun  WANG Xiao-Chen  CHEN Shi-Lin
Institution:1 Institute of Medicinal Plant Development (1MPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China; e Agricultural College, Henan University of Science and Technology, Luoyang 471003, China; 3 Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; Institute of Cornus officinalis, Nanyang 474550, China
Abstract:The DNA barcoding method was used to accurately and rapidly identify Comi Fructus and its adulterants. METHODS: Genomic DNA extracted from Comi Fructus and its adulterants were used as templates. The ITS (internal trascribed spacer) regions were amplified using polymerase chain reaction. Sequence assembly was performed using CodonCode Aligner V 3.5.4. Genetic distances were computed using MEGA V 5.0. Species identification was conducted using neighbor-joining (NJ) trees. RESULTS: The ITS sequence length of Comi Fructus was 659 bp. The average intra~specific genetic distance of Comi Fructus was 0.005, markedly lower than the inter-specific genetic distance between Corni Fructus and its adulterants (0.357). The ITS2 sequence length of Comi Fructus was 250 bp. No variation was found among the different samples. The interspecific genetic distance of ITS2 between Corni Fructus and its adulterants was 0.571. NJ trees and BLAST results indicated that Corni Fructus and its adulterants can be easily differentiated with monophyly. CONCLUSION: ITS/ITS2 regions can accurately and efficiently distinguish Corni Fructus and its adulterants. In addition, the results not only established the foundation for the clinical safety in the utilization of Comi Fructus, but also provided reference for molecular identification of other Chinese herbal medicine and Chinese herbal pieces.
Keywords:Comi Fructus  ITS/ITS2  DNA barcoding  Molecular identification
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