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基因芯片分型与实时荧光PCR筛查成都地区妇女宫颈HPV-DNA感染结果比较
引用本文:张辉,;陈祖翼,;丁显平,;聂双双,;张韶红. 基因芯片分型与实时荧光PCR筛查成都地区妇女宫颈HPV-DNA感染结果比较[J]. 中国优生与遗传杂志, 2014, 0(6): 8-11
作者姓名:张辉,  陈祖翼,  丁显平,  聂双双,  张韶红
作者单位:[1]四川大学生命科学学院遗传医学研究所、特色生物资源研究与利用川渝共建重点实验室,成都610064; [2]重庆市南川生物技术研究院,重庆408400
基金项目:四川省科技平台基地建设(CSTC2012PT-SY00001)
摘    要:目的了解成都地区HPV亚型的感染情况;评价基因分型(genotyping)与实时荧光定量PCR(real-time PCR)两种人乳头瘤病毒(HPV)检测方法的差异性,为临床应用提供参考。方法对2012年1月-2013年6月间来院就诊的女性,其中3537名进行基因芯片检测,991名进行实时荧光PCR检测。所得数据用SPSS 17.0进行统计分析。结果基因芯片分型法检测出阳性1315例,阳性率37.18%;实时荧光PCR检测出阳性137例,阳性率13.82%,两种方法检出率差异明显。基因分型法显示,HPV6、11、16、58、43型位居前五;荧光定量PCR显示HPV6、11、16、52、58在前五位。结论成都地区低危感染以HPV 6、11型为主,高危以16型为主,次之52、58型;基因芯片分型与临床HPV-DNA筛查检出率高,优于荧光定量PCR法。

关 键 词:人乳头瘤病毒  基因分型  荧光定量  差异性

A comparison of genotyping and real-time PCR for the screening results of cervical HPV-DNA infection in Chengdu,China
Affiliation:ZHANG Hui, CHENZu-yi, DING Xian-ping, NIEShuang-shuang, ZItANG Shao-hong. (Chongqing/ Institute of Medical Genetics&College of Life Science, Sichuan University, Bio-resource Research and Utilization Joint Key Laboratory of Sichuan, Chengdu, 610041; Biotechnology Academy of Nanchuan, Chongqing, 408400)
Abstract:Objective: The study is aim to investigate on HPV infection in Chengdu, China. And comparison of the screening results of cervical HPV-DNA infection between genotyping microarray and real-time PCR for clinical use. Methods: 3537 women, which were screened in January 2012 to June 2013, by genotyping while 991 women were by real-time PCR. The data were analyzed using SPSS 17.0. Results: 1315 patients with positive test and infection rate is 37.18% (95% CI, 35.59%~38.77%) by genotyping, and the infection rate by real-time PCR is 13.82% (95% CI, 11.67%~15.97%) with 137 positive patients. Conclusions: Low-risk of infection is mainly HPV6, 11, while the High-risk is HPV 16, followed HPV52 and 58 in Cbengdu, China. The screening results of cervical HPV-DNA infection between genotyping microarray and real-time PCR have a significant variability. Choice should be different when used in clinical.
Keywords:Human papillomavirus: Genotyping~ Real-timePCR  Variability
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